RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 GPHNQ9NQX3 736 aaPredicted RBP9.43□□□□□ -0.9
RBM28-206ENST00000487602 TPCN1Q9ULQ1 816 aa9.43□□□□□ -0.9
RBM28-206ENST00000487602 TSPY2A6NKD2 308 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 SHMT1P34896 483 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 LIFRP42702 1097 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 EVCP57679 992 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 TFAP4Q01664 338 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 APOBRQ0VD83 1088 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 SART3Q15020 963 aaKnown RBP9.42□□□□□ -0.9
RBM28-206ENST00000487602 CCDC178Q5BJE1 867 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 TMEM67Q5HYA8 995 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 ANGEL2Q5VTE6 544 aaKnown RBP9.42□□□□□ -0.9
RBM28-206ENST00000487602 USP50Q70EL3 339 aaPredicted RBP9.42□□□□□ -0.9
RBM28-206ENST00000487602 IQCA1Q86XH1 822 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 APOBEC3FQ8IUX4 373 aaKnown RBP9.42□□□□□ -0.9
RBM28-206ENST00000487602 TMTC2Q8N394 836 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 CRACR2BQ8N4Y2 399 aaPredicted RBP9.42□□□□□ -0.9
RBM28-206ENST00000487602 NEDD1Q8NHV4 660 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 CSRNP1Q96S65 589 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 TMEM39BQ9GZU3 492 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 DNAJC18Q9H819 358 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 SH2B1Q9NRF2 756 aaPredicted RBP9.42□□□□□ -0.9
RBM28-206ENST00000487602 TCP11L1Q9NUJ3 509 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 ANGEL1Q9UNK9 670 aaKnown RBP9.42□□□□□ -0.9
RBM28-206ENST00000487602 DDX60LQ5H9U9 1706 aaKnown RBP9.42□□□□□ -0.9
RBM28-206ENST00000487602 WDR90Q96KV7 1748 aa9.42□□□□□ -0.9
RBM28-206ENST00000487602 PITPNM2Q9BZ72 1349 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 SCN4AP35499 1836 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 ERICH2A1L162 156 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 IQCA1LA6NCM1 817 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 POTECB2RU33 542 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 TBC1D12O60347 775 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 TSPY3P0CV98 308 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 TSPY8P0CW00 308 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 SLURP2P0DP57 97 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 EPHX2P34913 555 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 MAP3K10Q02779 954 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 CUL4AQ13619 759 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 WTAPQ15007 396 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 SEC23AQ15436 765 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 ME3Q16798 604 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 TATDN1Q6P1N9 297 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 SGMS1Q86VZ5 419 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 ANKS1AQ92625 1134 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 ZNF274Q96GC6 653 aaPredicted RBP9.41□□□□□ -0.9
RBM28-206ENST00000487602 CCDC17Q96LX7 622 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 TEPSINQ96N21 525 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 ZSCAN10Q96SZ4 725 aaPredicted RBP9.41□□□□□ -0.9
RBM28-206ENST00000487602 ZKSCAN3Q9BRR0 538 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 UBAC1Q9BSL1 405 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 DEFB129Q9H1M3 183 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 LY9Q9HBG7 655 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 SENP2Q9HC62 589 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 HERC5Q9UII4 1024 aaKnown RBP9.41□□□□□ -0.9
RBM28-206ENST00000487602 LAMB1P07942 1786 aa9.41□□□□□ -0.9
RBM28-206ENST00000487602 TNKSO95271 1327 aa9.4□□□□□ -0.9
RBM28-206ENST00000487602 PFKFB2O60825 505 aa9.4□□□□□ -0.9
RBM28-206ENST00000487602 LARGE1O95461 756 aa9.4□□□□□ -0.9
RBM28-206ENST00000487602 AKR1B1P15121 316 aa9.4□□□□□ -0.9
RBM28-206ENST00000487602 PDIA3P30101 505 aaKnown RBP9.4□□□□□ -0.9
RBM28-206ENST00000487602 CERKLQ49MI3 558 aaPredicted RBP9.4□□□□□ -0.9
RBM28-206ENST00000487602 DGKHQ86XP1 1220 aa9.4□□□□□ -0.9
RBM28-206ENST00000487602 CDAN1Q8IWY9 1227 aa9.4□□□□□ -0.9
RBM28-206ENST00000487602 ENAHQ8N8S7 591 aaPredicted RBP9.4□□□□□ -0.9
RBM28-206ENST00000487602 ZC3H15Q8WU90 426 aaKnown RBP9.4□□□□□ -0.9
RBM28-206ENST00000487602 TAF1DQ9H5J8 278 aaPredicted RBP9.4□□□□□ -0.9
RBM28-206ENST00000487602 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.4□□□□□ -0.9
RBM28-206ENST00000487602 IL17RBQ9NRM6 502 aa9.4□□□□□ -0.9
RBM28-206ENST00000487602 GGA3Q9NZ52 723 aa9.4□□□□□ -0.9
RBM28-206ENST00000487602 BRPF3Q9ULD4 1205 aa9.4□□□□□ -0.9
RBM28-206ENST00000487602 SCAF8Q9UPN6 1271 aaKnown RBP9.4□□□□□ -0.9
RBM28-206ENST00000487602 PPP2R3BQ9Y5P8 575 aa9.4□□□□□ -0.9
RBM28-206ENST00000487602 IGKV6D-41A0A0C4DH26 115 aa9.39□□□□□ -0.91
RBM28-206ENST00000487602 KLF18A0A0U1RQI7 1052 aa9.39□□□□□ -0.91
RBM28-206ENST00000487602 CCDC69A6NI79 296 aa9.39□□□□□ -0.91
RBM28-206ENST00000487602 FAM196BA6NMK8 535 aa9.39□□□□□ -0.91
RBM28-206ENST00000487602 NMT2O60551 498 aa9.39□□□□□ -0.91
RBM28-206ENST00000487602 NOVP48745 357 aa9.39□□□□□ -0.91
RBM28-206ENST00000487602 IFIT1BQ5T764 474 aaKnown RBP9.39□□□□□ -0.91
RBM28-206ENST00000487602 RCSD1Q6JBY9 416 aa9.39□□□□□ -0.91
RBM28-206ENST00000487602 SYNE3Q6ZMZ3 975 aa9.39□□□□□ -0.91
RBM28-206ENST00000487602 NFXL1Q6ZNB6 911 aa9.39□□□□□ -0.91
RBM28-206ENST00000487602 MIGA2Q7L4E1 593 aa9.39□□□□□ -0.91
RBM28-206ENST00000487602 PNMA8AQ86V59 439 aaPredicted RBP9.39□□□□□ -0.91
RBM28-206ENST00000487602 NECAB1Q8N987 351 aa9.39□□□□□ -0.91
RBM28-206ENST00000487602 SPRYD3Q8NCJ5 442 aa9.39□□□□□ -0.91
RBM28-206ENST00000487602 DCPSQ96C86 337 aaKnown RBP9.39□□□□□ -0.91
RBM28-206ENST00000487602 INTS4Q96HW7 963 aaKnown RBP9.39□□□□□ -0.91
RBM28-206ENST00000487602 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.39□□□□□ -0.91
RBM28-206ENST00000487602 SLKQ9H2G2 1235 aaPredicted RBP9.39□□□□□ -0.91
RBM28-206ENST00000487602 PLIN4Q96Q06 1357 aa9.38□□□□□ -0.91
RBM28-206ENST00000487602 HSP90AA1P07900 732 aaKnown RBP9.38□□□□□ -0.91
RBM28-206ENST00000487602 RCAN1P53805 252 aa9.38□□□□□ -0.91
RBM28-206ENST00000487602 ST3GAL1Q11201 340 aa9.38□□□□□ -0.91
RBM28-206ENST00000487602 STK3Q13188 491 aa9.38□□□□□ -0.91
RBM28-206ENST00000487602 RRP1BQ14684 758 aaKnown RBP9.38□□□□□ -0.91
RBM28-206ENST00000487602 ABCB5Q2M3G0 1257 aa9.38□□□□□ -0.91
RBM28-206ENST00000487602 PPP4R3BQ5MIZ7 849 aa9.38□□□□□ -0.91
RBM28-206ENST00000487602 NBPF12Q5TAG4 269 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms