RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 BRCA1P38398 1863 aaKnown RBP7.19□□□□□ -1.26
VAMP3-203ENST00000487194 FOCADQ5VW36 1801 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 FER1L6Q2WGJ9 1857 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 CEP350Q5VT06 3117 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 CDK5RAP2Q96SN8 1893 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 NFKBIEO00221 500 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 PSMD14O00487 310 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 ENTPD3O75355 529 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 RAD17O75943 681 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 TSPY3P0CV98 308 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 TSPY8P0CW00 308 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 IFNAR1P17181 557 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 RPS12P25398 132 aaKnown RBP7.18□□□□□ -1.26
VAMP3-203ENST00000487194 CDK8P49336 464 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 DLGAP5Q15398 846 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 FAM47AQ5JRC9 791 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 CIAPIN1Q6FI81 312 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 TRIM22Q8IYM9 498 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 FANCBQ8NB91 859 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 MTMR14Q8NCE2 650 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 NEDD1Q8NHV4 660 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 NKX2-3Q8TAU0 364 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 DYNLL2Q96FJ2 89 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 GMLQ99445 158 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 MAP3K14Q99558 947 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 EHD4Q9H223 541 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 ZSCAN16Q9H4T2 348 aaPredicted RBP7.18□□□□□ -1.26
VAMP3-203ENST00000487194 ORC3Q9UBD5 711 aaPredicted RBP7.18□□□□□ -1.26
VAMP3-203ENST00000487194 SERPINB13Q9UIV8 391 aa7.18□□□□□ -1.26
VAMP3-203ENST00000487194 DDX60LQ5H9U9 1706 aaKnown RBP7.18□□□□□ -1.26
VAMP3-203ENST00000487194 ZNF646O15015 1829 aaPredicted RBP7.17□□□□□ -1.26
VAMP3-203ENST00000487194 MYH1P12882 1939 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 SPDYE2BA6NHP3 402 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 SMIM22K7EJ46 135 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 MYO1BO43795 1136 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 SPDYE6P0CI01 402 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 RASA1P20936 1047 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 KIF5BP33176 963 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 ADD1P35611 737 aaKnown RBP7.17□□□□□ -1.26
VAMP3-203ENST00000487194 EIF6P56537 245 aaKnown RBP7.17□□□□□ -1.26
VAMP3-203ENST00000487194 GABPAQ06546 454 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 CXCL9Q07325 125 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 SSRP1Q08945 709 aaKnown RBP7.17□□□□□ -1.26
VAMP3-203ENST00000487194 SLC4A8Q2Y0W8 1093 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 FOXD4L5Q5VV16 416 aaPredicted RBP7.17□□□□□ -1.26
VAMP3-203ENST00000487194 FKBP1CQ5VVH2 108 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 MCTP1Q6DN14 999 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 FOXP4Q8IVH2 680 aaPredicted RBP7.17□□□□□ -1.26
VAMP3-203ENST00000487194 CTCFLQ8NI51 663 aaPredicted RBP7.17□□□□□ -1.26
VAMP3-203ENST00000487194 NUP133Q8WUM0 1156 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 FOXD4L4Q8WXT5 416 aaPredicted RBP7.17□□□□□ -1.26
VAMP3-203ENST00000487194 C8orf76Q96K31 380 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 CCDC17Q96LX7 622 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 TRIM34Q9BYJ4 488 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 KAT14Q9H8E8 782 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 SENP2Q9HC62 589 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 DDX4Q9NQI0 724 aaKnown RBP7.17□□□□□ -1.26
VAMP3-203ENST00000487194 PI4KBQ9UBF8 816 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 PLIN4Q96Q06 1357 aa7.17□□□□□ -1.26
VAMP3-203ENST00000487194 COL2A1P02458 1487 aaPredicted RBP7.17□□□□□ -1.26
VAMP3-203ENST00000487194 ECM29Q5VYK3 1845 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 ARFGEF1Q9Y6D6 1849 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 TRAK2O60296 914 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 FMNL1O95466 1100 aaPredicted RBP7.16□□□□□ -1.26
VAMP3-203ENST00000487194 FDPSP14324 419 aaKnown RBP7.16□□□□□ -1.26
VAMP3-203ENST00000487194 XBP1P17861 261 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 NCLP19338 710 aaKnown RBP7.16□□□□□ -1.26
VAMP3-203ENST00000487194 RXRAP19793 462 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 CDC27P30260 824 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 GNAQP50148 359 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 AKAP17AQ02040 695 aaKnown RBP7.16□□□□□ -1.26
VAMP3-203ENST00000487194 EVX2Q03828 476 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 TROAPQ12815 778 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 NFIAQ12857 509 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 TRIM29Q14134 588 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 NTRK3Q16288 839 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 ATL3Q6DD88 541 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 CDC37L1Q7L3B6 337 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 RAB11FIP4Q86YS3 637 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 ZSCAN29Q8IWY8 852 aaPredicted RBP7.16□□□□□ -1.26
VAMP3-203ENST00000487194 CCDC144CPQ8IYA2 1237 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 CRACR2BQ8N4Y2 399 aaPredicted RBP7.16□□□□□ -1.26
VAMP3-203ENST00000487194 SLC44A5Q8NCS7 719 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 NLGN2Q8NFZ4 835 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 PRMT6Q96LA8 375 aaPredicted RBP7.16□□□□□ -1.26
VAMP3-203ENST00000487194 MYL10Q9BUA6 226 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 RNF26Q9BY78 433 aaPredicted RBP7.16□□□□□ -1.26
VAMP3-203ENST00000487194 TDRD3Q9H7E2 651 aaKnown RBP7.16□□□□□ -1.26
VAMP3-203ENST00000487194 FAM217BQ9NTX9 383 aaPredicted RBP7.16□□□□□ -1.26
VAMP3-203ENST00000487194 RBM27Q9P2N5 1060 aaKnown RBP7.16□□□□□ -1.26
VAMP3-203ENST00000487194 FAM198AQ9UFP1 575 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 ATRNL1Q5VV63 1379 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 COL4A5P29400 1685 aa7.16□□□□□ -1.26
VAMP3-203ENST00000487194 FZD9O00144 591 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 NMT2O60551 498 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 PRPF40AO75400 957 aaKnown RBP7.15□□□□□ -1.26
VAMP3-203ENST00000487194 DEXIO95424 95 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 MBD3O95983 291 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 TOP1P11387 765 aaKnown RBP7.15□□□□□ -1.26
VAMP3-203ENST00000487194 NOVP48745 357 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms