RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 COL8A1P27658 744 aa7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 FXNQ16595 210 aa7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 NKG7Q16617 165 aa7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 DDR2Q16832 855 aa7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 INTS3Q68E01 1043 aaKnown RBP7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 SLC6A19Q695T7 634 aa7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 ANKRD34AQ69YU3 496 aa7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 UNC5AQ6ZN44 842 aa7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 CDC37L1Q7L3B6 337 aa7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 TAB3Q8N5C8 712 aaPredicted RBP7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 ISL2Q96A47 359 aa7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 LENG1Q96BZ8 264 aaPredicted RBP7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 SLC9A7Q96T83 725 aa7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 PIDD1Q9HB75 910 aa7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 FAM105AQ9NUU6 356 aa7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 SNTG2Q9NY99 539 aa7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 CADPSQ9ULU8 1353 aa7.44□□□□□ -1.22
PRPF38A-203ENST00000487160 TLDC2A0PJX2 215 aa7.43□□□□□ -1.22
PRPF38A-203ENST00000487160 FAM221BA6H8Z2 402 aa7.43□□□□□ -1.22
PRPF38A-203ENST00000487160 FAM86C2PA6NEL3 165 aa7.43□□□□□ -1.22
PRPF38A-203ENST00000487160 TNFRSF10CO14798 259 aa7.43□□□□□ -1.22
PRPF38A-203ENST00000487160 RAG1P15918 1043 aa7.43□□□□□ -1.22
PRPF38A-203ENST00000487160 PREPP48147 710 aa7.43□□□□□ -1.22
PRPF38A-203ENST00000487160 RASA3Q14644 834 aa7.43□□□□□ -1.22
PRPF38A-203ENST00000487160 ZNF746Q6NUN9 644 aaPredicted RBP7.43□□□□□ -1.22
PRPF38A-203ENST00000487160 MRPL41Q8IXM3 137 aaKnown RBP7.43□□□□□ -1.22
PRPF38A-203ENST00000487160 DEPDC7Q96QD5 511 aa7.43□□□□□ -1.22
PRPF38A-203ENST00000487160 DPH2Q9BQC3 489 aaPredicted RBP7.43□□□□□ -1.22
PRPF38A-203ENST00000487160 SSU72Q9NP77 194 aaKnown RBP7.43□□□□□ -1.22
PRPF38A-203ENST00000487160 MSRB2Q9Y3D2 182 aa7.43□□□□□ -1.22
PRPF38A-203ENST00000487160 C9orf172C9J069 976 aa7.42□□□□□ -1.22
PRPF38A-203ENST00000487160 DDAH1O94760 285 aa7.42□□□□□ -1.22
PRPF38A-203ENST00000487160 GJB6O95452 261 aa7.42□□□□□ -1.22
PRPF38A-203ENST00000487160 POLR2BP30876 1174 aaKnown RBP7.42□□□□□ -1.22
PRPF38A-203ENST00000487160 YARSP54577 528 aaKnown RBP7.42□□□□□ -1.22
PRPF38A-203ENST00000487160 SLBPQ14493 270 aaKnown RBP eCLIP7.42□□□□□ -1.22
PRPF38A-203ENST00000487160 SLFN12Q8IYM2 578 aa7.42□□□□□ -1.22
PRPF38A-203ENST00000487160 SMYD4Q8IYR2 804 aaPredicted RBP7.42□□□□□ -1.22
PRPF38A-203ENST00000487160 KCT2Q8NC54 265 aa7.42□□□□□ -1.22
PRPF38A-203ENST00000487160 CCDC113Q9H0I3 377 aa7.42□□□□□ -1.22
PRPF38A-203ENST00000487160 MAPK8IP1Q9UQF2 711 aa7.42□□□□□ -1.22
PRPF38A-203ENST00000487160 TMA7Q9Y2S6 64 aaKnown RBP7.42□□□□□ -1.22
PRPF38A-203ENST00000487160 LTBP3Q9NS15 1303 aa7.42□□□□□ -1.22
PRPF38A-203ENST00000487160 SART1O43290 800 aaKnown RBP7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 APBA3O96018 575 aa7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 GLB1P16278 677 aa7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 NOS3P29474 1203 aa7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 IREB2P48200 963 aaKnown RBP7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 PRAMEF13Q5VWM6 474 aa7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 C6orf15Q6UXA7 325 aaPredicted RBP7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 LRP10Q7Z4F1 713 aa7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 PHACTR4Q8IZ21 702 aa7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 WFDC12Q8WWY7 111 aa7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 SCARF2Q96GP6 870 aaPredicted RBP7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 UBL7Q96S82 380 aaPredicted RBP7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 KIF2CQ99661 725 aa7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 CEP41Q9BYV8 373 aa7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 PCOLCE2Q9UKZ9 415 aa7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 TBX22Q9Y458 520 aa7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 SLC12A7Q9Y666 1083 aa7.41□□□□□ -1.22
PRPF38A-203ENST00000487160 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.4□□□□□ -1.22
PRPF38A-203ENST00000487160 B2RBV5 119 aa7.4□□□□□ -1.22
PRPF38A-203ENST00000487160 RAB6AP20340 208 aa7.4□□□□□ -1.22
PRPF38A-203ENST00000487160 USP11P51784 963 aa7.4□□□□□ -1.22
PRPF38A-203ENST00000487160 NRG1Q02297 640 aaPredicted RBP7.4□□□□□ -1.22
PRPF38A-203ENST00000487160 CDPF1Q6NVV7 123 aa7.4□□□□□ -1.22
PRPF38A-203ENST00000487160 Q6ZS46 218 aa7.4□□□□□ -1.22
PRPF38A-203ENST00000487160 JAZF1Q86VZ6 243 aa7.4□□□□□ -1.22
PRPF38A-203ENST00000487160 FAM178BQ8IXR5 827 aa7.4□□□□□ -1.22
PRPF38A-203ENST00000487160 XAGE3Q8WTP9 111 aa7.4□□□□□ -1.22
PRPF38A-203ENST00000487160 NACC1Q96RE7 527 aa7.4□□□□□ -1.22
PRPF38A-203ENST00000487160 PCDHB10Q9UN67 800 aa7.4□□□□□ -1.22
PRPF38A-203ENST00000487160 RGS13O14921 159 aa7.39□□□□□ -1.23
PRPF38A-203ENST00000487160 PDPK1O15530 556 aa7.39□□□□□ -1.23
PRPF38A-203ENST00000487160 GAS2O43903 313 aaKnown RBP7.39□□□□□ -1.23
PRPF38A-203ENST00000487160 CST3P01034 146 aaPredicted RBP7.39□□□□□ -1.23
PRPF38A-203ENST00000487160 CAP2P40123 477 aa7.39□□□□□ -1.23
PRPF38A-203ENST00000487160 INSM1Q01101 510 aaPredicted RBP7.39□□□□□ -1.23
PRPF38A-203ENST00000487160 BAHD1Q8TBE0 780 aaPredicted RBP7.39□□□□□ -1.23
PRPF38A-203ENST00000487160 CCDC74BQ96LY2 380 aa7.39□□□□□ -1.23
PRPF38A-203ENST00000487160 FOXQ1Q9C009 403 aa7.39□□□□□ -1.23
PRPF38A-203ENST00000487160 ACSS3Q9H6R3 686 aa7.39□□□□□ -1.23
PRPF38A-203ENST00000487160 LGR6Q9HBX8 967 aa7.39□□□□□ -1.23
PRPF38A-203ENST00000487160 MRPL42Q9Y6G3 142 aaKnown RBP7.39□□□□□ -1.23
PRPF38A-203ENST00000487160 NFICP08651 508 aa7.38□□□□□ -1.23
PRPF38A-203ENST00000487160 GBP1P32455 592 aa7.38□□□□□ -1.23
PRPF38A-203ENST00000487160 ADGRE1Q14246 886 aa7.38□□□□□ -1.23
PRPF38A-203ENST00000487160 MBTPS1Q14703 1052 aa7.38□□□□□ -1.23
PRPF38A-203ENST00000487160 VHLLQ6RSH7 139 aa7.38□□□□□ -1.23
PRPF38A-203ENST00000487160 FBLIM1Q8WUP2 373 aa7.38□□□□□ -1.23
PRPF38A-203ENST00000487160 FAM46AQ96IP4 442 aaKnown RBP7.38□□□□□ -1.23
PRPF38A-203ENST00000487160 DNAJC7Q99615 494 aa7.38□□□□□ -1.23
PRPF38A-203ENST00000487160 PHAXQ9H814 394 aaKnown RBP7.38□□□□□ -1.23
PRPF38A-203ENST00000487160 DAGLAQ9Y4D2 1042 aa7.38□□□□□ -1.23
PRPF38A-203ENST00000487160 LRIG2O94898 1065 aa7.37□□□□□ -1.23
PRPF38A-203ENST00000487160 UBOX5O94941 541 aa7.37□□□□□ -1.23
PRPF38A-203ENST00000487160 CCNFP41002 786 aa7.37□□□□□ -1.23
PRPF38A-203ENST00000487160 IFRD2Q12894 506 aaPredicted RBP7.37□□□□□ -1.23
PRPF38A-203ENST00000487160 RASGRF1Q13972 1273 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms