RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ANKRD24Q8TF21 1146 aa6.94□□□□□ -1.3
SNRNP40-205ENST00000486941 RNF19AQ9NV58 838 aa6.94□□□□□ -1.3
SNRNP40-205ENST00000486941 PCDHA4Q9UN74 947 aa6.94□□□□□ -1.3
SNRNP40-205ENST00000486941 ZNF503-AS2A6NEH8 195 aa6.93□□□□□ -1.3
SNRNP40-205ENST00000486941 FANCGO15287 622 aa6.93□□□□□ -1.3
SNRNP40-205ENST00000486941 SLBPQ14493 270 aaKnown RBP eCLIP6.93□□□□□ -1.3
SNRNP40-205ENST00000486941 NKG7Q16617 165 aa6.93□□□□□ -1.3
SNRNP40-205ENST00000486941 FYB2Q5VWT5 728 aa6.93□□□□□ -1.3
SNRNP40-205ENST00000486941 LLGL2Q6P1M3 1020 aa6.93□□□□□ -1.3
SNRNP40-205ENST00000486941 SLC23A3Q6PIS1 610 aa6.93□□□□□ -1.3
SNRNP40-205ENST00000486941 ARMCX6Q7L4S7 300 aa6.93□□□□□ -1.3
SNRNP40-205ENST00000486941 GAL3ST3Q96A11 431 aa6.93□□□□□ -1.3
SNRNP40-205ENST00000486941 PITPNM2Q9BZ72 1349 aa6.93□□□□□ -1.3
SNRNP40-205ENST00000486941 BIN1O00499 593 aa6.92□□□□□ -1.3
SNRNP40-205ENST00000486941 ANGEL2Q5VTE6 544 aaKnown RBP6.92□□□□□ -1.3
SNRNP40-205ENST00000486941 PCNX4Q63HM2 1172 aa6.92□□□□□ -1.3
SNRNP40-205ENST00000486941 CYFIP1Q7L576 1253 aa6.92□□□□□ -1.3
SNRNP40-205ENST00000486941 CILP2Q8IUL8 1156 aa6.92□□□□□ -1.3
SNRNP40-205ENST00000486941 FLAD1Q8NFF5 587 aa6.92□□□□□ -1.3
SNRNP40-205ENST00000486941 FBF1Q8TES7 1133 aa6.92□□□□□ -1.3
SNRNP40-205ENST00000486941 ASB16Q96NS5 453 aa6.92□□□□□ -1.3
SNRNP40-205ENST00000486941 CEP44Q9C0F1 390 aa6.92□□□□□ -1.3
SNRNP40-205ENST00000486941 SEMA3GQ9NS98 782 aa6.92□□□□□ -1.3
SNRNP40-205ENST00000486941 PPM1HQ9ULR3 514 aa6.92□□□□□ -1.3
SNRNP40-205ENST00000486941 KIF13AQ9H1H9 1805 aa6.92□□□□□ -1.3
SNRNP40-205ENST00000486941 PRG4Q92954 1404 aaPredicted RBP6.92□□□□□ -1.3
SNRNP40-205ENST00000486941 ARHGAP27Q6ZUM4 889 aa6.91□□□□□ -1.3
SNRNP40-205ENST00000486941 TMEM40Q8WWA1 233 aa6.91□□□□□ -1.3
SNRNP40-205ENST00000486941 PLPPR2Q96GM1 343 aa6.91□□□□□ -1.3
SNRNP40-205ENST00000486941 C19orf73Q9NVV2 129 aa6.91□□□□□ -1.3
SNRNP40-205ENST00000486941 CTNND2Q9UQB3 1225 aa6.91□□□□□ -1.3
SNRNP40-205ENST00000486941 P4HBP07237 508 aaKnown RBP6.9□□□□□ -1.3
SNRNP40-205ENST00000486941 USP17L7P0C7H9 530 aa6.9□□□□□ -1.3
SNRNP40-205ENST00000486941 ZP2Q05996 745 aa6.9□□□□□ -1.3
SNRNP40-205ENST00000486941 PDE4CQ08493 712 aa6.9□□□□□ -1.3
SNRNP40-205ENST00000486941 SRCIN1Q9C0H9 1055 aa6.9□□□□□ -1.3
SNRNP40-205ENST00000486941 C12orf49Q9H741 205 aa6.9□□□□□ -1.3
SNRNP40-205ENST00000486941 GTF2IRD1Q9UHL9 959 aa6.9□□□□□ -1.3
SNRNP40-205ENST00000486941 IVNS1ABPQ9Y6Y0 642 aa6.9□□□□□ -1.3
SNRNP40-205ENST00000486941 IKZF1Q13422 519 aa6.89□□□□□ -1.31
SNRNP40-205ENST00000486941 HSPA12BQ96MM6 686 aa6.89□□□□□ -1.31
SNRNP40-205ENST00000486941 ATP13A1Q9HD20 1204 aa6.89□□□□□ -1.31
SNRNP40-205ENST00000486941 CYP8B1Q9UNU6 501 aa6.89□□□□□ -1.31
SNRNP40-205ENST00000486941 FARP2O94887 1054 aaPredicted RBP6.88□□□□□ -1.31
SNRNP40-205ENST00000486941 LRIG2O94898 1065 aa6.88□□□□□ -1.31
SNRNP40-205ENST00000486941 ALG1LQ6GMV1 187 aa6.88□□□□□ -1.31
SNRNP40-205ENST00000486941 ASB11Q8WXH4 323 aa6.88□□□□□ -1.31
SNRNP40-205ENST00000486941 PCDHB5Q9Y5E4 795 aa6.88□□□□□ -1.31
SNRNP40-205ENST00000486941 RUSC2Q8N2Y8 1516 aa6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 PRAMEF27A3QJZ7 478 aa6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 GIPC1O14908 333 aa6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 HNRNPUQ00839 825 aaKnown RBP eCLIP6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 LRRC14Q15048 493 aa6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 SCARA3Q6AZY7 606 aa6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 SPOCD1Q6ZMY3 1216 aa6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 ZNF507Q8TCN5 953 aa6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 ELMO3Q96BJ8 720 aa6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 LIN37Q96GY3 246 aaPredicted RBP6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 WNT10AQ9GZT5 417 aa6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 PRDM5Q9NQX1 630 aaPredicted RBP6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 PICK1Q9NRD5 415 aa6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 MAPK8IP1Q9UQF2 711 aa6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 ST14Q9Y5Y6 855 aa6.87□□□□□ -1.31
SNRNP40-205ENST00000486941 MAPKBP1O60336 1514 aa6.86□□□□□ -1.31
SNRNP40-205ENST00000486941 KIAA0586Q9BVV6 1533 aa6.86□□□□□ -1.31
SNRNP40-205ENST00000486941 ABCC10Q5T3U5 1492 aa6.86□□□□□ -1.31
SNRNP40-205ENST00000486941 DBX1A6NMT0 343 aa6.86□□□□□ -1.31
SNRNP40-205ENST00000486941 GFRA2O00451 464 aa6.86□□□□□ -1.31
SNRNP40-205ENST00000486941 ZNF865P0CJ78 1059 aaPredicted RBP6.86□□□□□ -1.31
SNRNP40-205ENST00000486941 CAP2P40123 477 aa6.86□□□□□ -1.31
SNRNP40-205ENST00000486941 CDC37L1Q7L3B6 337 aa6.86□□□□□ -1.31
SNRNP40-205ENST00000486941 ZSWIM9Q86XI8 627 aa6.86□□□□□ -1.31
SNRNP40-205ENST00000486941 KRTAP4-9Q9BYQ8 210 aa6.86□□□□□ -1.31
SNRNP40-205ENST00000486941 FOXQ1Q9C009 403 aa6.86□□□□□ -1.31
SNRNP40-205ENST00000486941 CARS2Q9HA77 564 aaKnown RBP6.86□□□□□ -1.31
SNRNP40-205ENST00000486941 FAM8A1Q9UBU6 413 aa6.86□□□□□ -1.31
SNRNP40-205ENST00000486941 SAMM50Q9Y512 469 aa6.86□□□□□ -1.31
SNRNP40-205ENST00000486941 KIF27Q86VH2 1401 aa6.85□□□□□ -1.31
SNRNP40-205ENST00000486941 CUL7Q14999 1698 aa6.85□□□□□ -1.31
SNRNP40-205ENST00000486941 WASH4PA8MWX3 477 aa6.85□□□□□ -1.31
SNRNP40-205ENST00000486941 CLCN7P51798 805 aa6.85□□□□□ -1.31
SNRNP40-205ENST00000486941 FGD1P98174 961 aa6.85□□□□□ -1.31
SNRNP40-205ENST00000486941 ZSCAN29Q8IWY8 852 aaPredicted RBP6.85□□□□□ -1.31
SNRNP40-205ENST00000486941 MIPEPQ99797 713 aa6.85□□□□□ -1.31
SNRNP40-205ENST00000486941 TIMELESSQ9UNS1 1208 aa6.85□□□□□ -1.31
SNRNP40-205ENST00000486941 CAPN6Q9Y6Q1 641 aa6.85□□□□□ -1.31
SNRNP40-205ENST00000486941 ADCY10Q96PN6 1610 aa6.84□□□□□ -1.31
SNRNP40-205ENST00000486941 GNAT3A8MTJ3 354 aa6.84□□□□□ -1.31
SNRNP40-205ENST00000486941 KRTAP9-7A8MTY7 169 aa6.84□□□□□ -1.31
SNRNP40-205ENST00000486941 KRT1P04264 644 aa6.84□□□□□ -1.31
SNRNP40-205ENST00000486941 SEPT6Q14141 434 aa6.84□□□□□ -1.31
SNRNP40-205ENST00000486941 WIPI1Q5MNZ9 446 aaPredicted RBP6.84□□□□□ -1.31
SNRNP40-205ENST00000486941 CDKAL1Q5VV42 579 aa6.84□□□□□ -1.31
SNRNP40-205ENST00000486941 TTBK2Q6IQ55 1244 aa6.84□□□□□ -1.31
SNRNP40-205ENST00000486941 C22orf34Q6ZV56 151 aa6.84□□□□□ -1.31
SNRNP40-205ENST00000486941 SV2BQ7L1I2 683 aa6.84□□□□□ -1.31
SNRNP40-205ENST00000486941 KCNK12Q9HB15 430 aa6.84□□□□□ -1.31
SNRNP40-205ENST00000486941 LMCD1Q9NZU5 365 aa6.84□□□□□ -1.31
SNRNP40-205ENST00000486941 DIP2BQ9P265 1576 aa6.83□□□□□ -1.32
SNRNP40-205ENST00000486941 LRRC10BA6NIK2 292 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms