RNA–Protein interactions for RNA: ENST00000486461.1

PDZD11-204, Transcript of PDZ domain containing 11, humanhuman

TSL 3

Gene PDZD11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-204ENST00000486461 MAP3K10Q02779 954 aa7.56□□□□□ -1.2
PDZD11-204ENST00000486461 PPIGQ13427 754 aaKnown RBP eCLIP7.56□□□□□ -1.2
PDZD11-204ENST00000486461 Q3C1V9 767 aa7.56□□□□□ -1.2
PDZD11-204ENST00000486461 CCDC30Q5VVM6 783 aa7.56□□□□□ -1.2
PDZD11-204ENST00000486461 ANO1Q5XXA6 986 aa7.56□□□□□ -1.2
PDZD11-204ENST00000486461 SLC44A5Q8NCS7 719 aa7.56□□□□□ -1.2
PDZD11-204ENST00000486461 TBC1D2Q9BYX2 928 aa7.56□□□□□ -1.2
PDZD11-204ENST00000486461 CD320Q9NPF0 282 aa7.56□□□□□ -1.2
PDZD11-204ENST00000486461 MBIPQ9NS73 344 aa7.56□□□□□ -1.2
PDZD11-204ENST00000486461 GBF1Q92538 1859 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 CACNA1GO43497 2377 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 CACNA1BQ00975 2339 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 ENTPD3O75355 529 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 CYBAP13498 195 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 HOXA7P31268 230 aaPredicted RBP7.55□□□□□ -1.2
PDZD11-204ENST00000486461 CYP2C19P33261 490 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 ZEB1P37275 1124 aaPredicted RBP7.55□□□□□ -1.2
PDZD11-204ENST00000486461 RGS3P49796 1198 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 FOXO4P98177 505 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 LRRC41Q15345 812 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 SH3D19Q5HYK7 790 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 TMEM240Q5SV17 173 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 RASIP1Q5U651 963 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 TRPV1Q8NER1 839 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 GTF3C2Q8WUA4 911 aaPredicted RBP7.55□□□□□ -1.2
PDZD11-204ENST00000486461 HLA-CQ95604 372 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 PAGR1Q9BTK6 254 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.55□□□□□ -1.2
PDZD11-204ENST00000486461 RBPJLQ9UBG7 517 aa7.55□□□□□ -1.2
PDZD11-204ENST00000486461 ZNF318Q5VUA4 2279 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 PTPRZ1P23471 2315 aaPredicted RBP7.54□□□□□ -1.2
PDZD11-204ENST00000486461 DDTLA6NHG4 134 aaPredicted RBP7.54□□□□□ -1.2
PDZD11-204ENST00000486461 SLC15A5A6NIM6 579 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 DCDC2CA8MYV0 355 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 TIMP1P01033 207 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 SLURP2P0DP57 97 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 DIXDC1Q155Q3 683 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 WDR78Q5VTH9 848 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 PPP2R2DQ66LE6 453 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 MFSD5Q6N075 450 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 LMBR1LQ6UX01 489 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 C16orf59Q7L2K0 433 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 SH3BP5LQ7L8J4 393 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 GJD3Q8N144 294 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 WDR66Q8TBY9 1149 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 PHOX2BQ99453 314 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 IDI2Q9BXS1 227 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 OSBPL5Q9H0X9 879 aaPredicted RBP7.54□□□□□ -1.2
PDZD11-204ENST00000486461 MTIF3Q9H2K0 278 aaKnown RBP7.54□□□□□ -1.2
PDZD11-204ENST00000486461 AS3MTQ9HBK9 375 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 TMOD4Q9NZQ9 345 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 TRIM35Q9UPQ4 493 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 YBX2Q9Y2T7 364 aaKnown RBP7.54□□□□□ -1.2
PDZD11-204ENST00000486461 MTCH2Q9Y6C9 303 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 NDUFB9Q9Y6M9 179 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 IVNS1ABPQ9Y6Y0 642 aa7.54□□□□□ -1.2
PDZD11-204ENST00000486461 BRWD1Q9NSI6 2320 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 USP17L5A8MUK1 530 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 APBB1O00213 710 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 SEPT4O43236 478 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 HOXC6P09630 235 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 SLC5A1P13866 664 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 POU3F3P20264 500 aaPredicted RBP7.53□□□□□ -1.2
PDZD11-204ENST00000486461 PTPREP23469 700 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 SSTR3P32745 418 aaPredicted RBP7.53□□□□□ -1.2
PDZD11-204ENST00000486461 CCNA1P78396 465 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 FAAP100Q0VG06 881 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 MTMR2Q13614 643 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 NCBP3Q53F19 620 aaKnown RBP7.53□□□□□ -1.2
PDZD11-204ENST00000486461 PSRC1Q6PGN9 363 aaPredicted RBP7.53□□□□□ -1.2
PDZD11-204ENST00000486461 ZNF365Q70YC5 407 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 NPLOC4Q8TAT6 608 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 TOX2Q96NM4 488 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 PHF24Q9UPV7 400 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 XIRP2A4UGR9 3374 aa7.53□□□□□ -1.2
PDZD11-204ENST00000486461 MROH5Q6ZUA9 1318 aa7.52□□□□□ -1.2
PDZD11-204ENST00000486461 ZNF521Q96K83 1311 aa7.52□□□□□ -1.2
PDZD11-204ENST00000486461 ATAD5Q96QE3 1844 aa7.52□□□□□ -1.2
PDZD11-204ENST00000486461 MYH13Q9UKX3 1938 aa7.52□□□□□ -1.2
PDZD11-204ENST00000486461 SMCHD1A6NHR9 2005 aa7.52□□□□□ -1.2
PDZD11-204ENST00000486461 TBC1D12O60347 775 aa7.52□□□□□ -1.21
PDZD11-204ENST00000486461 ACRP10323 421 aa7.52□□□□□ -1.21
PDZD11-204ENST00000486461 CSF2RAP15509 400 aa7.52□□□□□ -1.21
PDZD11-204ENST00000486461 TRIM26Q12899 539 aaPredicted RBP7.52□□□□□ -1.21
PDZD11-204ENST00000486461 ANKRD33Q7Z3H0 272 aa7.52□□□□□ -1.21
PDZD11-204ENST00000486461 TMEM199Q8N511 208 aa7.52□□□□□ -1.21
PDZD11-204ENST00000486461 LINS1Q8NG48 757 aa7.52□□□□□ -1.21
PDZD11-204ENST00000486461 STK31Q9BXU1 1019 aa7.52□□□□□ -1.21
PDZD11-204ENST00000486461 PUS3Q9BZE2 481 aaKnown RBP7.52□□□□□ -1.21
PDZD11-204ENST00000486461 CHD9Q3L8U1 2897 aa7.52□□□□□ -1.21
PDZD11-204ENST00000486461 SPTBN4Q9H254 2564 aa7.52□□□□□ -1.21
PDZD11-204ENST00000486461 REV3LO60673 3130 aa7.52□□□□□ -1.21
PDZD11-204ENST00000486461 A0A1W2PQ45 241 aaPredicted RBP7.51□□□□□ -1.21
PDZD11-204ENST00000486461 A0A1W2PQY0 241 aa7.51□□□□□ -1.21
PDZD11-204ENST00000486461 FAM196BA6NMK8 535 aa7.51□□□□□ -1.21
PDZD11-204ENST00000486461 C19orf81C9J6K1 198 aa7.51□□□□□ -1.21
PDZD11-204ENST00000486461 RFXAPO00287 272 aa7.51□□□□□ -1.21
PDZD11-204ENST00000486461 DCXO43602 365 aa7.51□□□□□ -1.21
PDZD11-204ENST00000486461 GFRA3O60609 400 aa7.51□□□□□ -1.21
PDZD11-204ENST00000486461 LDHBP07195 334 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms