RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ADCY3O60266 1144 aa27.28■■□□□ 1.96
SREBF1-214ENST00000486311 GDF11O95390 407 aa27.28■■□□□ 1.96
SREBF1-214ENST00000486311 GJB1P08034 283 aa27.28■■□□□ 1.96
SREBF1-214ENST00000486311 USP5P45974 858 aa27.28■■□□□ 1.96
SREBF1-214ENST00000486311 CLASRPQ8N2M8 674 aaKnown RBP27.28■■□□□ 1.96
SREBF1-214ENST00000486311 PXYLP1Q8TE99 480 aa27.28■■□□□ 1.96
SREBF1-214ENST00000486311 COA7Q96BR5 231 aa27.28■■□□□ 1.96
SREBF1-214ENST00000486311 GJA8P48165 433 aa27.27■■□□□ 1.96
SREBF1-214ENST00000486311 TTF1Q15361 905 aaPredicted RBP27.27■■□□□ 1.96
SREBF1-214ENST00000486311 SHROOM1Q2M3G4 852 aaPredicted RBP27.27■■□□□ 1.96
SREBF1-214ENST00000486311 RNF208Q9H0X6 261 aa27.27■■□□□ 1.96
SREBF1-214ENST00000486311 TMOD4Q9NZQ9 345 aa27.27■■□□□ 1.96
SREBF1-214ENST00000486311 LOC285556D6RIA3 1793 aa27.27■■□□□ 1.96
SREBF1-214ENST00000486311 C19orf81C9J6K1 198 aa27.26■■□□□ 1.95
SREBF1-214ENST00000486311 HOXA7P31268 230 aaPredicted RBP27.26■■□□□ 1.95
SREBF1-214ENST00000486311 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.26■■□□□ 1.95
SREBF1-214ENST00000486311 RIOK1Q9BRS2 568 aaKnown RBP27.26■■□□□ 1.95
SREBF1-214ENST00000486311 EHD4Q9H223 541 aa27.26■■□□□ 1.95
SREBF1-214ENST00000486311 USP17L10C9JJH3 530 aa27.25■■□□□ 1.95
SREBF1-214ENST00000486311 ELNP15502 786 aa27.25■■□□□ 1.95
SREBF1-214ENST00000486311 CHMP4BQ9H444 224 aaKnown RBP27.25■■□□□ 1.95
SREBF1-214ENST00000486311 RCAN3Q9UKA8 241 aa27.25■■□□□ 1.95
SREBF1-214ENST00000486311 APBB1O00213 710 aa27.24■■□□□ 1.95
SREBF1-214ENST00000486311 RAB11FIP3O75154 756 aa27.24■■□□□ 1.95
SREBF1-214ENST00000486311 HABP4Q5JVS0 413 aaKnown RBP27.24■■□□□ 1.95
SREBF1-214ENST00000486311 TATDN1Q6P1N9 297 aa27.24■■□□□ 1.95
SREBF1-214ENST00000486311 UNC93B1Q9H1C4 597 aa27.24■■□□□ 1.95
SREBF1-214ENST00000486311 MORF4L1Q9UBU8 362 aa27.24■■□□□ 1.95
SREBF1-214ENST00000486311 SERPINB13Q9UIV8 391 aa27.24■■□□□ 1.95
SREBF1-214ENST00000486311 MYO5AQ9Y4I1 1855 aaKnown RBP27.23■■□□□ 1.95
SREBF1-214ENST00000486311 FOCADQ5VW36 1801 aa27.23■■□□□ 1.95
SREBF1-214ENST00000486311 INHAP05111 366 aa27.23■■□□□ 1.95
SREBF1-214ENST00000486311 IFIT2P09913 472 aaKnown RBP27.23■■□□□ 1.95
SREBF1-214ENST00000486311 IRX3P78415 501 aaPredicted RBP27.23■■□□□ 1.95
SREBF1-214ENST00000486311 TTC6Q86TZ1 520 aa27.23■■□□□ 1.95
SREBF1-214ENST00000486311 ATAD5Q96QE3 1844 aa27.23■■□□□ 1.95
SREBF1-214ENST00000486311 GH2P01242 217 aa27.22■■□□□ 1.95
SREBF1-214ENST00000486311 PDE6AP16499 860 aa27.22■■□□□ 1.95
SREBF1-214ENST00000486311 SLC9C2Q5TAH2 1124 aa27.22■■□□□ 1.95
SREBF1-214ENST00000486311 UBE2Q1Q7Z7E8 422 aa27.22■■□□□ 1.95
SREBF1-214ENST00000486311 P2RX7Q99572 595 aaKnown RBP27.22■■□□□ 1.95
SREBF1-214ENST00000486311 MGAMO43451 1857 aa27.21■■□□□ 1.95
SREBF1-214ENST00000486311 MAGEB6P1A0A0J9YX57 407 aa27.21■■□□□ 1.95
SREBF1-214ENST00000486311 U2AF1L4Q8WU68 220 aaKnown RBP27.21■■□□□ 1.95
SREBF1-214ENST00000486311 CDK5RAP2Q96SN8 1893 aa27.21■■□□□ 1.95
SREBF1-214ENST00000486311 GOLIM4O00461 696 aa27.2■■□□□ 1.94
SREBF1-214ENST00000486311 USP17L2Q6R6M4 530 aa27.2■■□□□ 1.94
SREBF1-214ENST00000486311 DNAJC2Q99543 621 aaKnown RBP27.2■■□□□ 1.94
SREBF1-214ENST00000486311 EMILIN3Q9NT22 766 aa27.2■■□□□ 1.94
SREBF1-214ENST00000486311 TAOK2Q9UL54 1235 aa27.2■■□□□ 1.94
SREBF1-214ENST00000486311 SGPL1O95470 568 aa27.19■■□□□ 1.94
SREBF1-214ENST00000486311 HERVK_113P62684 666 aa27.19■■□□□ 1.94
SREBF1-214ENST00000486311 GJD2Q9UKL4 321 aa27.19■■□□□ 1.94
SREBF1-214ENST00000486311 ZNF532Q9HCE3 1301 aa27.18■■□□□ 1.94
SREBF1-214ENST00000486311 TCRBV5S4A2TA0A5A2 114 aa27.18■■□□□ 1.94
SREBF1-214ENST00000486311 CAPN2P17655 700 aa27.18■■□□□ 1.94
SREBF1-214ENST00000486311 PLCD1P51178 756 aa27.18■■□□□ 1.94
SREBF1-214ENST00000486311 CERKLQ49MI3 558 aaPredicted RBP27.18■■□□□ 1.94
SREBF1-214ENST00000486311 CRNKL1Q9BZJ0 848 aaKnown RBP27.18■■□□□ 1.94
SREBF1-214ENST00000486311 PDE3AQ14432 1141 aa27.17■■□□□ 1.94
SREBF1-214ENST00000486311 GPRC5AQ8NFJ5 357 aa27.17■■□□□ 1.94
SREBF1-214ENST00000486311 C12orf42Q96LP6 360 aa27.17■■□□□ 1.94
SREBF1-214ENST00000486311 TXNRD2Q9NNW7 524 aa27.17■■□□□ 1.94
SREBF1-214ENST00000486311 PAK6Q9NQU5 681 aaPredicted RBP27.17■■□□□ 1.94
SREBF1-214ENST00000486311 SHMT1P34896 483 aa27.16■■□□□ 1.94
SREBF1-214ENST00000486311 ABCB5Q2M3G0 1257 aa27.16■■□□□ 1.94
SREBF1-214ENST00000486311 GTF3C2Q8WUA4 911 aaPredicted RBP27.16■■□□□ 1.94
SREBF1-214ENST00000486311 RBPJLQ9UBG7 517 aa27.16■■□□□ 1.94
SREBF1-214ENST00000486311 POLR3DP05423 398 aaPredicted RBP27.15■■□□□ 1.94
SREBF1-214ENST00000486311 ATP5JP18859 108 aa27.15■■□□□ 1.94
SREBF1-214ENST00000486311 GABPAQ06546 454 aa27.15■■□□□ 1.94
SREBF1-214ENST00000486311 RAB3GAP1Q15042 981 aa27.15■■□□□ 1.94
SREBF1-214ENST00000486311 C20orf194Q5TEA3 1177 aa27.15■■□□□ 1.94
SREBF1-214ENST00000486311 EDC3Q96F86 508 aaKnown RBP27.15■■□□□ 1.94
SREBF1-214ENST00000486311 BCL11AQ9H165 835 aa27.15■■□□□ 1.94
SREBF1-214ENST00000486311 PAG1Q9NWQ8 432 aa27.15■■□□□ 1.94
SREBF1-214ENST00000486311 H0YGN5 161 aa27.14■■□□□ 1.94
SREBF1-214ENST00000486311 PEX10O60683 326 aa27.14■■□□□ 1.94
SREBF1-214ENST00000486311 FARP2O94887 1054 aaPredicted RBP27.14■■□□□ 1.94
SREBF1-214ENST00000486311 HMGCRP04035 888 aa27.14■■□□□ 1.94
SREBF1-214ENST00000486311 USP14P54578 494 aa27.14■■□□□ 1.94
SREBF1-214ENST00000486311 DEFB118Q96PH6 123 aa27.14■■□□□ 1.94
SREBF1-214ENST00000486311 FEZ1Q99689 392 aa27.14■■□□□ 1.94
SREBF1-214ENST00000486311 CABP5Q9NP86 173 aa27.14■■□□□ 1.94
SREBF1-214ENST00000486311 MCM9Q9NXL9 1143 aa27.14■■□□□ 1.94
SREBF1-214ENST00000486311 LCORLQ8N3X6 602 aa27.13■■□□□ 1.93
SREBF1-214ENST00000486311 DPF3Q92784 378 aa27.13■■□□□ 1.93
SREBF1-214ENST00000486311 HTATIP2Q9BUP3 242 aa27.13■■□□□ 1.93
SREBF1-214ENST00000486311 KIAA1683Q9H0B3 1180 aa27.13■■□□□ 1.93
SREBF1-214ENST00000486311 CRISPLD2Q9H0B8 497 aa27.13■■□□□ 1.93
SREBF1-214ENST00000486311 BOLA2Q9H3K6 86 aa27.13■■□□□ 1.93
SREBF1-214ENST00000486311 ERVK-9P63128 1117 aa27.12■■□□□ 1.93
SREBF1-214ENST00000486311 ERVK-24P63145 666 aa27.12■■□□□ 1.93
SREBF1-214ENST00000486311 Q3C1V9 767 aa27.12■■□□□ 1.93
SREBF1-214ENST00000486311 POTEEQ6S8J3 1075 aa27.12■■□□□ 1.93
SREBF1-214ENST00000486311 ACER1Q8TDN7 264 aa27.12■■□□□ 1.93
SREBF1-214ENST00000486311 SDR42E1Q8WUS8 393 aa27.12■■□□□ 1.93
SREBF1-214ENST00000486311 HAUS7Q99871 368 aa27.12■■□□□ 1.93
SREBF1-214ENST00000486311 DCP1AQ9NPI6 582 aaPredicted RBP27.12■■□□□ 1.93
SREBF1-214ENST00000486311 USP17L15C9J2P7 530 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms