RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 IRF5Q13568 498 aa20.88■□□□□ 0.93
SMC4-216ENST00000485645 MTMR2Q13614 643 aa20.88■□□□□ 0.93
SMC4-216ENST00000485645 RPAP2Q8IXW5 612 aaPredicted RBP20.88■□□□□ 0.93
SMC4-216ENST00000485645 PXYLP1Q8TE99 480 aa20.88■□□□□ 0.93
SMC4-216ENST00000485645 SHISA4Q96DD7 197 aa20.88■□□□□ 0.93
SMC4-216ENST00000485645 TMOD4Q9NZQ9 345 aa20.88■□□□□ 0.93
SMC4-216ENST00000485645 C19orf81C9J6K1 198 aa20.87■□□□□ 0.93
SMC4-216ENST00000485645 GJA8P48165 433 aa20.87■□□□□ 0.93
SMC4-216ENST00000485645 JAG1P78504 1218 aa20.87■□□□□ 0.93
SMC4-216ENST00000485645 DDX19BQ9UMR2 479 aa20.87■□□□□ 0.93
SMC4-216ENST00000485645 DOCK3Q8IZD9 2030 aa20.87■□□□□ 0.93
SMC4-216ENST00000485645 USP17L10C9JJH3 530 aa20.86■□□□□ 0.93
SMC4-216ENST00000485645 HMMRO75330 724 aa20.86■□□□□ 0.93
SMC4-216ENST00000485645 ELNP15502 786 aa20.86■□□□□ 0.93
SMC4-216ENST00000485645 CLASRPQ8N2M8 674 aaKnown RBP20.86■□□□□ 0.93
SMC4-216ENST00000485645 KIF1BPQ96EK5 621 aa20.86■□□□□ 0.93
SMC4-216ENST00000485645 TAOK2Q9UL54 1235 aa20.86■□□□□ 0.93
SMC4-216ENST00000485645 ZBTB21Q9ULJ3 1066 aa20.86■□□□□ 0.93
SMC4-216ENST00000485645 COG6Q9Y2V7 657 aa20.86■□□□□ 0.93
SMC4-216ENST00000485645 MYH1P12882 1939 aa20.85■□□□□ 0.93
SMC4-216ENST00000485645 APBB1O00213 710 aa20.85■□□□□ 0.93
SMC4-216ENST00000485645 IRX3P78415 501 aaPredicted RBP20.85■□□□□ 0.93
SMC4-216ENST00000485645 TTF1Q15361 905 aaPredicted RBP20.85■□□□□ 0.93
SMC4-216ENST00000485645 SHROOM1Q2M3G4 852 aaPredicted RBP20.85■□□□□ 0.93
SMC4-216ENST00000485645 UNC93B1Q9H1C4 597 aa20.85■□□□□ 0.93
SMC4-216ENST00000485645 INHAP05111 366 aa20.84■□□□□ 0.93
SMC4-216ENST00000485645 HOXA7P31268 230 aaPredicted RBP20.84■□□□□ 0.93
SMC4-216ENST00000485645 TTC6Q86TZ1 520 aa20.84■□□□□ 0.93
SMC4-216ENST00000485645 CHMP4BQ9H444 224 aaKnown RBP20.84■□□□□ 0.93
SMC4-216ENST00000485645 ZBTB40Q9NUA8 1239 aa20.84■□□□□ 0.93
SMC4-216ENST00000485645 IFIT2P09913 472 aaKnown RBP20.83■□□□□ 0.93
SMC4-216ENST00000485645 HABP4Q5JVS0 413 aaKnown RBP20.83■□□□□ 0.93
SMC4-216ENST00000485645 TATDN1Q6P1N9 297 aa20.83■□□□□ 0.93
SMC4-216ENST00000485645 U2AF1L4Q8WU68 220 aaKnown RBP20.83■□□□□ 0.93
SMC4-216ENST00000485645 EHD4Q9H223 541 aa20.83■□□□□ 0.93
SMC4-216ENST00000485645 SERPINB13Q9UIV8 391 aa20.83■□□□□ 0.93
SMC4-216ENST00000485645 RAB11FIP3O75154 756 aa20.82■□□□□ 0.92
SMC4-216ENST00000485645 SGPL1O95470 568 aa20.82■□□□□ 0.92
SMC4-216ENST00000485645 GH2P01242 217 aa20.82■□□□□ 0.92
SMC4-216ENST00000485645 SIRT2Q8IXJ6 389 aa20.82■□□□□ 0.92
SMC4-216ENST00000485645 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.82■□□□□ 0.92
SMC4-216ENST00000485645 P2RX7Q99572 595 aaKnown RBP20.82■□□□□ 0.92
SMC4-216ENST00000485645 RIOK1Q9BRS2 568 aaKnown RBP20.82■□□□□ 0.92
SMC4-216ENST00000485645 BCL11AQ9H165 835 aa20.82■□□□□ 0.92
SMC4-216ENST00000485645 MORF4L1Q9UBU8 362 aa20.82■□□□□ 0.92
SMC4-216ENST00000485645 RCAN3Q9UKA8 241 aa20.82■□□□□ 0.92
SMC4-216ENST00000485645 MAGEB6P1A0A0J9YX57 407 aa20.81■□□□□ 0.92
SMC4-216ENST00000485645 SLC9C2Q5TAH2 1124 aa20.81■□□□□ 0.92
SMC4-216ENST00000485645 DPF3Q92784 378 aa20.81■□□□□ 0.92
SMC4-216ENST00000485645 PDE6AP16499 860 aa20.8■□□□□ 0.92
SMC4-216ENST00000485645 CAPN2P17655 700 aa20.8■□□□□ 0.92
SMC4-216ENST00000485645 HERVK_113P62684 666 aa20.8■□□□□ 0.92
SMC4-216ENST00000485645 CERKLQ49MI3 558 aaPredicted RBP20.8■□□□□ 0.92
SMC4-216ENST00000485645 USP17L2Q6R6M4 530 aa20.8■□□□□ 0.92
SMC4-216ENST00000485645 UBE2Q1Q7Z7E8 422 aa20.8■□□□□ 0.92
SMC4-216ENST00000485645 DNAJC2Q99543 621 aaKnown RBP20.8■□□□□ 0.92
SMC4-216ENST00000485645 HTATIP2Q9BUP3 242 aa20.8■□□□□ 0.92
SMC4-216ENST00000485645 EMILIN3Q9NT22 766 aa20.8■□□□□ 0.92
SMC4-216ENST00000485645 PCDH10Q9P2E7 1040 aa20.8■□□□□ 0.92
SMC4-216ENST00000485645 GJD2Q9UKL4 321 aa20.8■□□□□ 0.92
SMC4-216ENST00000485645 CEP290O15078 2479 aa20.8■□□□□ 0.92
SMC4-216ENST00000485645 GOLIM4O00461 696 aa20.79■□□□□ 0.92
SMC4-216ENST00000485645 TFRCP02786 760 aaKnown RBP20.79■□□□□ 0.92
SMC4-216ENST00000485645 POLR3DP05423 398 aaPredicted RBP20.79■□□□□ 0.92
SMC4-216ENST00000485645 GPRC5AQ8NFJ5 357 aa20.79■□□□□ 0.92
SMC4-216ENST00000485645 DEFB118Q96PH6 123 aa20.79■□□□□ 0.92
SMC4-216ENST00000485645 CRNKL1Q9BZJ0 848 aaKnown RBP20.79■□□□□ 0.92
SMC4-216ENST00000485645 H0YGN5 161 aa20.78■□□□□ 0.92
SMC4-216ENST00000485645 FARP2O94887 1054 aaPredicted RBP20.78■□□□□ 0.92
SMC4-216ENST00000485645 PLCD1P51178 756 aa20.78■□□□□ 0.92
SMC4-216ENST00000485645 RAB3GAP1Q15042 981 aa20.78■□□□□ 0.92
SMC4-216ENST00000485645 ABCB5Q2M3G0 1257 aa20.78■□□□□ 0.92
SMC4-216ENST00000485645 GTF3C2Q8WUA4 911 aaPredicted RBP20.78■□□□□ 0.92
SMC4-216ENST00000485645 FEZ1Q99689 392 aa20.78■□□□□ 0.92
SMC4-216ENST00000485645 CABP5Q9NP86 173 aa20.78■□□□□ 0.92
SMC4-216ENST00000485645 PAK6Q9NQU5 681 aaPredicted RBP20.78■□□□□ 0.92
SMC4-216ENST00000485645 ZNF532Q9HCE3 1301 aa20.78■□□□□ 0.92
SMC4-216ENST00000485645 HMGCRP04035 888 aa20.77■□□□□ 0.92
SMC4-216ENST00000485645 ZYXQ15942 572 aaKnown RBP20.77■□□□□ 0.92
SMC4-216ENST00000485645 C12orf42Q96LP6 360 aa20.77■□□□□ 0.92
SMC4-216ENST00000485645 TXNRD2Q9NNW7 524 aa20.77■□□□□ 0.92
SMC4-216ENST00000485645 RBPJLQ9UBG7 517 aa20.77■□□□□ 0.92
SMC4-216ENST00000485645 PEX10O60683 326 aa20.76■□□□□ 0.91
SMC4-216ENST00000485645 SHMT1P34896 483 aa20.76■□□□□ 0.91
SMC4-216ENST00000485645 USP14P54578 494 aa20.76■□□□□ 0.91
SMC4-216ENST00000485645 CCAR1Q8IX12 1150 aaKnown RBP20.76■□□□□ 0.91
SMC4-216ENST00000485645 BOLA2Q9H3K6 86 aa20.76■□□□□ 0.91
SMC4-216ENST00000485645 MCM9Q9NXL9 1143 aa20.76■□□□□ 0.91
SMC4-216ENST00000485645 COLQQ9Y215 455 aaPredicted RBP20.76■□□□□ 0.91
SMC4-216ENST00000485645 TCRBV5S4A2TA0A5A2 114 aa20.75■□□□□ 0.91
SMC4-216ENST00000485645 MAPK4P31152 587 aa20.75■□□□□ 0.91
SMC4-216ENST00000485645 ERVK-9P63128 1117 aa20.75■□□□□ 0.91
SMC4-216ENST00000485645 ERVK-24P63145 666 aa20.75■□□□□ 0.91
SMC4-216ENST00000485645 Q3C1V9 767 aa20.75■□□□□ 0.91
SMC4-216ENST00000485645 EDC3Q96F86 508 aaKnown RBP20.75■□□□□ 0.91
SMC4-216ENST00000485645 NUDT12Q9BQG2 462 aa20.75■□□□□ 0.91
SMC4-216ENST00000485645 PAGR1Q9BTK6 254 aa20.75■□□□□ 0.91
SMC4-216ENST00000485645 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.75■□□□□ 0.91
SMC4-216ENST00000485645 PAG1Q9NWQ8 432 aa20.75■□□□□ 0.91
SMC4-216ENST00000485645 USP17L15C9J2P7 530 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms