RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 MTMR2Q13614 643 aa31.27■■■□□ 2.6
HLA-F-227ENST00000485513 ASCC2Q9H1I8 757 aaPredicted RBP31.27■■■□□ 2.6
HLA-F-227ENST00000485513 RCAN3Q9UKA8 241 aa31.27■■■□□ 2.6
HLA-F-227ENST00000485513 ADCY3O60266 1144 aa31.26■■■□□ 2.59
HLA-F-227ENST00000485513 CCL5P13501 91 aa31.26■■■□□ 2.59
HLA-F-227ENST00000485513 BACE1P56817 501 aa31.26■■■□□ 2.59
HLA-F-227ENST00000485513 SHROOM1Q2M3G4 852 aaPredicted RBP31.26■■■□□ 2.59
HLA-F-227ENST00000485513 SIRT2Q8IXJ6 389 aa31.26■■■□□ 2.59
HLA-F-227ENST00000485513 TMOD4Q9NZQ9 345 aa31.26■■■□□ 2.59
HLA-F-227ENST00000485513 TTF1Q15361 905 aaPredicted RBP31.25■■■□□ 2.59
HLA-F-227ENST00000485513 NKX2-3Q8TAU0 364 aa31.25■■■□□ 2.59
HLA-F-227ENST00000485513 COA7Q96BR5 231 aa31.25■■■□□ 2.59
HLA-F-227ENST00000485513 GCC1Q96CN9 775 aa31.25■■■□□ 2.59
HLA-F-227ENST00000485513 CHMP4BQ9H444 224 aaKnown RBP31.25■■■□□ 2.59
HLA-F-227ENST00000485513 ZBTB21Q9ULJ3 1066 aa31.25■■■□□ 2.59
HLA-F-227ENST00000485513 DOCK3Q8IZD9 2030 aa31.25■■■□□ 2.59
HLA-F-227ENST00000485513 IRF5Q13568 498 aa31.24■■■□□ 2.59
HLA-F-227ENST00000485513 SHISA4Q96DD7 197 aa31.24■■■□□ 2.59
HLA-F-227ENST00000485513 RNF208Q9H0X6 261 aa31.24■■■□□ 2.59
HLA-F-227ENST00000485513 C19orf81C9J6K1 198 aa31.23■■■□□ 2.59
HLA-F-227ENST00000485513 GJB1P08034 283 aa31.23■■■□□ 2.59
HLA-F-227ENST00000485513 IFIT2P09913 472 aaKnown RBP31.23■■■□□ 2.59
HLA-F-227ENST00000485513 USP17L10C9JJH3 530 aa31.22■■■□□ 2.59
HLA-F-227ENST00000485513 IRX3P78415 501 aaPredicted RBP31.22■■■□□ 2.59
HLA-F-227ENST00000485513 PXYLP1Q8TE99 480 aa31.22■■■□□ 2.59
HLA-F-227ENST00000485513 BCL11AQ9H165 835 aa31.22■■■□□ 2.59
HLA-F-227ENST00000485513 RAB11FIP3O75154 756 aa31.21■■■□□ 2.59
HLA-F-227ENST00000485513 ELNP15502 786 aa31.21■■■□□ 2.59
HLA-F-227ENST00000485513 GJA8P48165 433 aa31.21■■■□□ 2.59
HLA-F-227ENST00000485513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.21■■■□□ 2.59
HLA-F-227ENST00000485513 RIOK1Q9BRS2 568 aaKnown RBP31.21■■■□□ 2.59
HLA-F-227ENST00000485513 SERPINB13Q9UIV8 391 aa31.21■■■□□ 2.59
HLA-F-227ENST00000485513 HOXA7P31268 230 aaPredicted RBP31.2■■■□□ 2.59
HLA-F-227ENST00000485513 SLC9C2Q5TAH2 1124 aa31.2■■■□□ 2.59
HLA-F-227ENST00000485513 TTC6Q86TZ1 520 aa31.2■■■□□ 2.59
HLA-F-227ENST00000485513 EHD4Q9H223 541 aa31.2■■■□□ 2.59
HLA-F-227ENST00000485513 TAOK2Q9UL54 1235 aa31.2■■■□□ 2.59
HLA-F-227ENST00000485513 MAGEB6P1A0A0J9YX57 407 aa31.19■■■□□ 2.58
HLA-F-227ENST00000485513 GH2P01242 217 aa31.19■■■□□ 2.58
HLA-F-227ENST00000485513 PDE6AP16499 860 aa31.19■■■□□ 2.58
HLA-F-227ENST00000485513 TATDN1Q6P1N9 297 aa31.19■■■□□ 2.58
HLA-F-227ENST00000485513 DNAJC2Q99543 621 aaKnown RBP31.19■■■□□ 2.58
HLA-F-227ENST00000485513 UNC93B1Q9H1C4 597 aa31.19■■■□□ 2.58
HLA-F-227ENST00000485513 GOLIM4O00461 696 aa31.18■■■□□ 2.58
HLA-F-227ENST00000485513 INHAP05111 366 aa31.18■■■□□ 2.58
HLA-F-227ENST00000485513 MORF4L1Q9UBU8 362 aa31.18■■■□□ 2.58
HLA-F-227ENST00000485513 P2RX7Q99572 595 aaKnown RBP31.17■■■□□ 2.58
HLA-F-227ENST00000485513 U2AF1L4Q8WU68 220 aaKnown RBP31.16■■■□□ 2.58
HLA-F-227ENST00000485513 CRNKL1Q9BZJ0 848 aaKnown RBP31.16■■■□□ 2.58
HLA-F-227ENST00000485513 NAV1Q8NEY1 1877 aa31.15■■■□□ 2.58
HLA-F-227ENST00000485513 HERVK_113P62684 666 aa31.15■■■□□ 2.58
HLA-F-227ENST00000485513 USP17L2Q6R6M4 530 aa31.15■■■□□ 2.58
HLA-F-227ENST00000485513 EMILIN3Q9NT22 766 aa31.15■■■□□ 2.58
HLA-F-227ENST00000485513 ZNF532Q9HCE3 1301 aa31.15■■■□□ 2.58
HLA-F-227ENST00000485513 DDX60LQ5H9U9 1706 aaKnown RBP31.15■■■□□ 2.58
HLA-F-227ENST00000485513 POLR3DP05423 398 aaPredicted RBP31.14■■■□□ 2.58
HLA-F-227ENST00000485513 PLCD1P51178 756 aa31.14■■■□□ 2.58
HLA-F-227ENST00000485513 CERKLQ49MI3 558 aaPredicted RBP31.14■■■□□ 2.58
HLA-F-227ENST00000485513 PDE3AQ14432 1141 aa31.13■■■□□ 2.57
HLA-F-227ENST00000485513 C20orf194Q5TEA3 1177 aa31.13■■■□□ 2.57
HLA-F-227ENST00000485513 EDC3Q96F86 508 aaKnown RBP31.13■■■□□ 2.57
HLA-F-227ENST00000485513 FEZ1Q99689 392 aa31.13■■■□□ 2.57
HLA-F-227ENST00000485513 CEP290O15078 2479 aa31.13■■■□□ 2.57
HLA-F-227ENST00000485513 TCRBV5S4A2TA0A5A2 114 aa31.12■■■□□ 2.57
HLA-F-227ENST00000485513 SGPL1O95470 568 aa31.12■■■□□ 2.57
HLA-F-227ENST00000485513 RAB3GAP1Q15042 981 aa31.12■■■□□ 2.57
HLA-F-227ENST00000485513 ABCB5Q2M3G0 1257 aa31.12■■■□□ 2.57
HLA-F-227ENST00000485513 UBE2Q1Q7Z7E8 422 aa31.12■■■□□ 2.57
HLA-F-227ENST00000485513 GPRC5AQ8NFJ5 357 aa31.12■■■□□ 2.57
HLA-F-227ENST00000485513 GJD2Q9UKL4 321 aa31.12■■■□□ 2.57
HLA-F-227ENST00000485513 SHMT1P34896 483 aa31.11■■■□□ 2.57
HLA-F-227ENST00000485513 HABP4Q5JVS0 413 aaKnown RBP31.11■■■□□ 2.57
HLA-F-227ENST00000485513 BOLA2Q9H3K6 86 aa31.11■■■□□ 2.57
HLA-F-227ENST00000485513 TXNRD2Q9NNW7 524 aa31.11■■■□□ 2.57
HLA-F-227ENST00000485513 CABP5Q9NP86 173 aa31.11■■■□□ 2.57
HLA-F-227ENST00000485513 PAG1Q9NWQ8 432 aa31.11■■■□□ 2.57
HLA-F-227ENST00000485513 PEX10O60683 326 aa31.1■■■□□ 2.57
HLA-F-227ENST00000485513 ATP5JP18859 108 aa31.1■■■□□ 2.57
HLA-F-227ENST00000485513 ZYXQ15942 572 aaKnown RBP31.1■■■□□ 2.57
HLA-F-227ENST00000485513 GTF3C2Q8WUA4 911 aaPredicted RBP31.1■■■□□ 2.57
HLA-F-227ENST00000485513 C12orf42Q96LP6 360 aa31.1■■■□□ 2.57
HLA-F-227ENST00000485513 MCM9Q9NXL9 1143 aa31.1■■■□□ 2.57
HLA-F-227ENST00000485513 FARP2O94887 1054 aaPredicted RBP31.09■■■□□ 2.57
HLA-F-227ENST00000485513 LCORLQ8N3X6 602 aa31.09■■■□□ 2.57
HLA-F-227ENST00000485513 DPF3Q92784 378 aa31.09■■■□□ 2.57
HLA-F-227ENST00000485513 DEFB118Q96PH6 123 aa31.09■■■□□ 2.57
HLA-F-227ENST00000485513 PAK6Q9NQU5 681 aaPredicted RBP31.09■■■□□ 2.57
HLA-F-227ENST00000485513 RBPJLQ9UBG7 517 aa31.09■■■□□ 2.57
HLA-F-227ENST00000485513 PLXNB2O15031 1838 aa31.08■■■□□ 2.57
HLA-F-227ENST00000485513 HMGCRP04035 888 aa31.08■■■□□ 2.57
HLA-F-227ENST00000485513 USP14P54578 494 aa31.08■■■□□ 2.57
HLA-F-227ENST00000485513 GABPAQ06546 454 aa31.08■■■□□ 2.57
HLA-F-227ENST00000485513 SDR42E1Q8WUS8 393 aa31.08■■■□□ 2.57
HLA-F-227ENST00000485513 HTATIP2Q9BUP3 242 aa31.08■■■□□ 2.57
HLA-F-227ENST00000485513 KIAA1683Q9H0B3 1180 aa31.08■■■□□ 2.57
HLA-F-227ENST00000485513 H0YGN5 161 aa31.07■■■□□ 2.56
HLA-F-227ENST00000485513 TFRCP02786 760 aaKnown RBP31.07■■■□□ 2.56
HLA-F-227ENST00000485513 CAPN2P17655 700 aa31.07■■■□□ 2.56
HLA-F-227ENST00000485513 HAUS7Q99871 368 aa31.07■■■□□ 2.56
HLA-F-227ENST00000485513 PAGR1Q9BTK6 254 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms