RNA–Protein interactions for RNA: ENST00000485306.1

TRIM54-203, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-203ENST00000485306 ARHGAP39Q9C0H5 1083 aa20.04■□□□□ 0.8
TRIM54-203ENST00000485306 ECHDC1Q9NTX5 307 aa20.04■□□□□ 0.8
TRIM54-203ENST00000485306 ADGRA2Q96PE1 1338 aa20.03■□□□□ 0.8
TRIM54-203ENST00000485306 SLC9C1Q4G0N8 1177 aa20.03■□□□□ 0.8
TRIM54-203ENST00000485306 ANKRD45Q5TZF3 282 aa20.03■□□□□ 0.8
TRIM54-203ENST00000485306 ARMC5Q96C12 935 aa20.03■□□□□ 0.8
TRIM54-203ENST00000485306 WDR18Q9BV38 432 aa20.03■□□□□ 0.8
TRIM54-203ENST00000485306 EHD4Q9H223 541 aa20.03■□□□□ 0.8
TRIM54-203ENST00000485306 DNAJC18Q9H819 358 aa20.03■□□□□ 0.8
TRIM54-203ENST00000485306 SERPINB13Q9UIV8 391 aa20.03■□□□□ 0.8
TRIM54-203ENST00000485306 PTCH2Q9Y6C5 1203 aa20.03■□□□□ 0.8
TRIM54-203ENST00000485306 SIPA1L1O43166 1804 aa20.03■□□□□ 0.8
TRIM54-203ENST00000485306 POLR3DP05423 398 aaPredicted RBP20.02■□□□□ 0.8
TRIM54-203ENST00000485306 BCRP11274 1271 aa20.02■□□□□ 0.8
TRIM54-203ENST00000485306 HMGCS2P54868 508 aa20.02■□□□□ 0.8
TRIM54-203ENST00000485306 NUCB1Q02818 461 aa20.02■□□□□ 0.8
TRIM54-203ENST00000485306 SLC4A8Q2Y0W8 1093 aa20.02■□□□□ 0.8
TRIM54-203ENST00000485306 SH3D19Q5HYK7 790 aa20.02■□□□□ 0.8
TRIM54-203ENST00000485306 ZSCAN25Q6NSZ9 544 aa20.02■□□□□ 0.8
TRIM54-203ENST00000485306 GPATCH3Q96I76 525 aa20.02■□□□□ 0.8
TRIM54-203ENST00000485306 TMOD4Q9NZQ9 345 aa20.02■□□□□ 0.8
TRIM54-203ENST00000485306 C19orf81C9J6K1 198 aa20.01■□□□□ 0.79
TRIM54-203ENST00000485306 ECM2O94769 699 aaPredicted RBP20.01■□□□□ 0.79
TRIM54-203ENST00000485306 GDF11O95390 407 aa20.01■□□□□ 0.79
TRIM54-203ENST00000485306 OSBPP22059 807 aa20.01■□□□□ 0.79
TRIM54-203ENST00000485306 FCGRTP55899 365 aa20.01■□□□□ 0.79
TRIM54-203ENST00000485306 TATDN1Q6P1N9 297 aa20.01■□□□□ 0.79
TRIM54-203ENST00000485306 TRIM47Q96LD4 638 aa20.01■□□□□ 0.79
TRIM54-203ENST00000485306 TMEM106CQ9BVX2 250 aa20.01■□□□□ 0.79
TRIM54-203ENST00000485306 TCRBV5S4A2TA0A5A2 114 aa20■□□□□ 0.79
TRIM54-203ENST00000485306 ADD2P35612 726 aa20■□□□□ 0.79
TRIM54-203ENST00000485306 BACE1P56817 501 aa20■□□□□ 0.79
TRIM54-203ENST00000485306 TREML2Q5T2D2 321 aa20■□□□□ 0.79
TRIM54-203ENST00000485306 CHD1LQ86WJ1 897 aa20■□□□□ 0.79
TRIM54-203ENST00000485306 MCM9Q9NXL9 1143 aa20■□□□□ 0.79
TRIM54-203ENST00000485306 SRRDQ9UH36 339 aa20■□□□□ 0.79
TRIM54-203ENST00000485306 ZBTB21Q9ULJ3 1066 aa20■□□□□ 0.79
TRIM54-203ENST00000485306 USP17L10C9JJH3 530 aa19.99■□□□□ 0.79
TRIM54-203ENST00000485306 CERKLQ49MI3 558 aaPredicted RBP19.99■□□□□ 0.79
TRIM54-203ENST00000485306 TSHZ3Q63HK5 1081 aa19.99■□□□□ 0.79
TRIM54-203ENST00000485306 RAET1EQ8TD07 263 aa19.99■□□□□ 0.79
TRIM54-203ENST00000485306 CABP5Q9NP86 173 aa19.99■□□□□ 0.79
TRIM54-203ENST00000485306 GCLCP48506 637 aaPredicted RBP19.98■□□□□ 0.79
TRIM54-203ENST00000485306 JAG1P78504 1218 aa19.98■□□□□ 0.79
TRIM54-203ENST00000485306 MTMR2Q13614 643 aa19.98■□□□□ 0.79
TRIM54-203ENST00000485306 UBE3CQ15386 1083 aa19.98■□□□□ 0.79
TRIM54-203ENST00000485306 LCORLQ8N3X6 602 aa19.98■□□□□ 0.79
TRIM54-203ENST00000485306 ZNF333Q96JL9 665 aa19.98■□□□□ 0.79
TRIM54-203ENST00000485306 ZSWIM8A7E2V4 1837 aa19.97■□□□□ 0.79
TRIM54-203ENST00000485306 GH2P01242 217 aa19.97■□□□□ 0.79
TRIM54-203ENST00000485306 CTGFP29279 349 aa19.97■□□□□ 0.79
TRIM54-203ENST00000485306 PLCD1P51178 756 aa19.97■□□□□ 0.79
TRIM54-203ENST00000485306 ANKRD13CQ8N6S4 541 aa19.97■□□□□ 0.79
TRIM54-203ENST00000485306 OTUD7AQ8TE49 926 aaPredicted RBP19.97■□□□□ 0.79
TRIM54-203ENST00000485306 DDRGK1Q96HY6 314 aa19.97■□□□□ 0.79
TRIM54-203ENST00000485306 ARMT1Q9H993 441 aa19.97■□□□□ 0.79
TRIM54-203ENST00000485306 ATP8A2Q9NTI2 1148 aa19.97■□□□□ 0.79
TRIM54-203ENST00000485306 LOC285556D6RIA3 1793 aa19.97■□□□□ 0.79
TRIM54-203ENST00000485306 TTC41PQ6P2S7 1318 aa19.97■□□□□ 0.79
TRIM54-203ENST00000485306 MYPNQ86TC9 1320 aa19.97■□□□□ 0.79
TRIM54-203ENST00000485306 MGAMO43451 1857 aa19.96■□□□□ 0.79
TRIM54-203ENST00000485306 IRX3P78415 501 aaPredicted RBP19.96■□□□□ 0.79
TRIM54-203ENST00000485306 ABCB5Q2M3G0 1257 aa19.96■□□□□ 0.79
TRIM54-203ENST00000485306 AMOTL1Q8IY63 956 aa19.96■□□□□ 0.79
TRIM54-203ENST00000485306 SDR42E1Q8WUS8 393 aa19.96■□□□□ 0.79
TRIM54-203ENST00000485306 ASCC2Q9H1I8 757 aaPredicted RBP19.96■□□□□ 0.79
TRIM54-203ENST00000485306 DCP1AQ9NPI6 582 aaPredicted RBP19.96■□□□□ 0.79
TRIM54-203ENST00000485306 TAOK2Q9UL54 1235 aa19.96■□□□□ 0.79
TRIM54-203ENST00000485306 NAV1Q8NEY1 1877 aa19.95■□□□□ 0.78
TRIM54-203ENST00000485306 TNPO2O14787 897 aaKnown RBP19.95■□□□□ 0.78
TRIM54-203ENST00000485306 MBD4O95243 580 aa19.95■□□□□ 0.78
TRIM54-203ENST00000485306 HOXA7P31268 230 aaPredicted RBP19.95■□□□□ 0.78
TRIM54-203ENST00000485306 RAB3GAP1Q15042 981 aa19.95■□□□□ 0.78
TRIM54-203ENST00000485306 FAM110CQ1W6H9 321 aa19.95■□□□□ 0.78
TRIM54-203ENST00000485306 SLFNL1Q499Z3 407 aa19.95■□□□□ 0.78
TRIM54-203ENST00000485306 USP17L2Q6R6M4 530 aa19.95■□□□□ 0.78
TRIM54-203ENST00000485306 SH3TC2Q8TF17 1288 aa19.95■□□□□ 0.78
TRIM54-203ENST00000485306 LNPKQ9C0E8 428 aa19.95■□□□□ 0.78
TRIM54-203ENST00000485306 MYH7P12883 1935 aa19.95■□□□□ 0.78
TRIM54-203ENST00000485306 POTEFA5A3E0 1075 aa19.94■□□□□ 0.78
TRIM54-203ENST00000485306 ERC2O15083 957 aa19.94■□□□□ 0.78
TRIM54-203ENST00000485306 CHGBP05060 677 aa19.94■□□□□ 0.78
TRIM54-203ENST00000485306 GRK4P32298 578 aa19.94■□□□□ 0.78
TRIM54-203ENST00000485306 SHROOM1Q2M3G4 852 aaPredicted RBP19.94■□□□□ 0.78
TRIM54-203ENST00000485306 COA7Q96BR5 231 aa19.94■□□□□ 0.78
TRIM54-203ENST00000485306 FEZ1Q99689 392 aa19.94■□□□□ 0.78
TRIM54-203ENST00000485306 SWAP70Q9UH65 585 aa19.94■□□□□ 0.78
TRIM54-203ENST00000485306 KIAA0100Q14667 2235 aaKnown RBP19.93■□□□□ 0.78
TRIM54-203ENST00000485306 MX1P20591 662 aa19.93■□□□□ 0.78
TRIM54-203ENST00000485306 SHMT1P34896 483 aa19.93■□□□□ 0.78
TRIM54-203ENST00000485306 USP14P54578 494 aa19.93■□□□□ 0.78
TRIM54-203ENST00000485306 PRKCZQ05513 592 aa19.93■□□□□ 0.78
TRIM54-203ENST00000485306 GABPAQ06546 454 aa19.93■□□□□ 0.78
TRIM54-203ENST00000485306 LRRFIP1Q32MZ4 808 aaKnown RBP19.93■□□□□ 0.78
TRIM54-203ENST00000485306 KBTBD3Q8NAB2 608 aa19.93■□□□□ 0.78
TRIM54-203ENST00000485306 PI4K2BQ8TCG2 481 aa19.93■□□□□ 0.78
TRIM54-203ENST00000485306 BIN2Q9UBW5 565 aaPredicted RBP19.93■□□□□ 0.78
TRIM54-203ENST00000485306 SALL3Q9BXA9 1300 aa19.93■□□□□ 0.78
TRIM54-203ENST00000485306 PRKAB2O43741 272 aa19.92■□□□□ 0.78
TRIM54-203ENST00000485306 GLRX3O76003 335 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms