RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 LOC285556D6RIA3 1793 aa23.34■■□□□ 1.33
NDUFA3-213ENST00000484103 MAGEB6P1A0A0J9YX57 407 aa23.33■■□□□ 1.33
NDUFA3-213ENST00000484103 ASNSP08243 561 aa23.33■■□□□ 1.33
NDUFA3-213ENST00000484103 FLT3LGP49771 235 aa23.33■■□□□ 1.33
NDUFA3-213ENST00000484103 BOLA2Q9H3K6 86 aa23.33■■□□□ 1.33
NDUFA3-213ENST00000484103 MYH1P12882 1939 aa23.33■■□□□ 1.32
NDUFA3-213ENST00000484103 SMARCA5O60264 1052 aaPredicted RBP23.32■■□□□ 1.32
NDUFA3-213ENST00000484103 GH2P01242 217 aa23.32■■□□□ 1.32
NDUFA3-213ENST00000484103 CCL5P13501 91 aa23.32■■□□□ 1.32
NDUFA3-213ENST00000484103 PDE6AP16499 860 aa23.32■■□□□ 1.32
NDUFA3-213ENST00000484103 SLFNL1Q499Z3 407 aa23.32■■□□□ 1.32
NDUFA3-213ENST00000484103 ZNF532Q9HCE3 1301 aa23.32■■□□□ 1.32
NDUFA3-213ENST00000484103 ADCY3O60266 1144 aa23.31■■□□□ 1.32
NDUFA3-213ENST00000484103 IRX3P78415 501 aaPredicted RBP23.31■■□□□ 1.32
NDUFA3-213ENST00000484103 PABPC4Q13310 644 aaKnown RBP eCLIP23.31■■□□□ 1.328e-13■■■■■ 37
NDUFA3-213ENST00000484103 TTF1Q15361 905 aaPredicted RBP23.31■■□□□ 1.32
NDUFA3-213ENST00000484103 TBC1D2Q9BYX2 928 aa23.31■■□□□ 1.32
NDUFA3-213ENST00000484103 RNF208Q9H0X6 261 aa23.31■■□□□ 1.32
NDUFA3-213ENST00000484103 POLR3DP05423 398 aaPredicted RBP23.3■■□□□ 1.32
NDUFA3-213ENST00000484103 BACE1P56817 501 aa23.3■■□□□ 1.32
NDUFA3-213ENST00000484103 EVX2Q03828 476 aa23.3■■□□□ 1.32
NDUFA3-213ENST00000484103 RAB3GAP1Q15042 981 aa23.3■■□□□ 1.32
NDUFA3-213ENST00000484103 FEZ1Q99689 392 aa23.3■■□□□ 1.32
NDUFA3-213ENST00000484103 RIOK1Q9BRS2 568 aaKnown RBP23.3■■□□□ 1.32
NDUFA3-213ENST00000484103 WDR18Q9BV38 432 aa23.3■■□□□ 1.32
NDUFA3-213ENST00000484103 USP17L10C9JJH3 530 aa23.29■■□□□ 1.32
NDUFA3-213ENST00000484103 RAB11FIP3O75154 756 aa23.29■■□□□ 1.32
NDUFA3-213ENST00000484103 PLCD1P51178 756 aa23.29■■□□□ 1.32
NDUFA3-213ENST00000484103 UBXN2AP68543 259 aa23.29■■□□□ 1.32
NDUFA3-213ENST00000484103 SH3D19Q5HYK7 790 aa23.29■■□□□ 1.32
NDUFA3-213ENST00000484103 METTL16Q86W50 562 aaKnown RBP23.29■■□□□ 1.32
NDUFA3-213ENST00000484103 SLAIN1Q8ND83 568 aa23.29■■□□□ 1.32
NDUFA3-213ENST00000484103 SDR42E1Q8WUS8 393 aa23.29■■□□□ 1.32
NDUFA3-213ENST00000484103 COA7Q96BR5 231 aa23.29■■□□□ 1.32
NDUFA3-213ENST00000484103 UNC93B1Q9H1C4 597 aa23.29■■□□□ 1.32
NDUFA3-213ENST00000484103 SERPINB13Q9UIV8 391 aa23.29■■□□□ 1.32
NDUFA3-213ENST00000484103 INHAP05111 366 aa23.28■■□□□ 1.32
NDUFA3-213ENST00000484103 FAM110CQ1W6H9 321 aa23.28■■□□□ 1.32
NDUFA3-213ENST00000484103 LCORLQ8N3X6 602 aa23.28■■□□□ 1.32
NDUFA3-213ENST00000484103 SHISA4Q96DD7 197 aa23.28■■□□□ 1.32
NDUFA3-213ENST00000484103 CHMP4BQ9H444 224 aaKnown RBP23.28■■□□□ 1.32
NDUFA3-213ENST00000484103 ARMT1Q9H993 441 aa23.28■■□□□ 1.32
NDUFA3-213ENST00000484103 NAV1Q8NEY1 1877 aa23.28■■□□□ 1.32
NDUFA3-213ENST00000484103 IGSF3O75054 1194 aa23.27■■□□□ 1.32
NDUFA3-213ENST00000484103 CHGBP05060 677 aa23.27■■□□□ 1.32
NDUFA3-213ENST00000484103 CERKLQ49MI3 558 aaPredicted RBP23.27■■□□□ 1.32
NDUFA3-213ENST00000484103 TTC6Q86TZ1 520 aa23.27■■□□□ 1.32
NDUFA3-213ENST00000484103 CERS3Q8IU89 383 aa23.27■■□□□ 1.32
NDUFA3-213ENST00000484103 P2RX7Q99572 595 aaKnown RBP23.27■■□□□ 1.32
NDUFA3-213ENST00000484103 PAGR1Q9BTK6 254 aa23.27■■□□□ 1.32
NDUFA3-213ENST00000484103 CRNKL1Q9BZJ0 848 aaKnown RBP23.27■■□□□ 1.32
NDUFA3-213ENST00000484103 PAG1Q9NWQ8 432 aa23.27■■□□□ 1.32
NDUFA3-213ENST00000484103 MCM9Q9NXL9 1143 aa23.27■■□□□ 1.32
NDUFA3-213ENST00000484103 SLC34A2O95436 690 aa23.26■■□□□ 1.31
NDUFA3-213ENST00000484103 CYP2D6P10635 497 aa23.26■■□□□ 1.31
NDUFA3-213ENST00000484103 GCLCP48506 637 aaPredicted RBP23.26■■□□□ 1.31
NDUFA3-213ENST00000484103 MPHOSPH10O00566 681 aaKnown RBP23.25■■□□□ 1.31
NDUFA3-213ENST00000484103 ABCB5Q2M3G0 1257 aa23.25■■□□□ 1.31
NDUFA3-213ENST00000484103 LRRCC1Q9C099 1032 aa23.25■■□□□ 1.31
NDUFA3-213ENST00000484103 EMILIN3Q9NT22 766 aa23.25■■□□□ 1.31
NDUFA3-213ENST00000484103 TCRBV5S4A2TA0A5A2 114 aa23.24■■□□□ 1.31
NDUFA3-213ENST00000484103 C19orf81C9J6K1 198 aa23.24■■□□□ 1.31
NDUFA3-213ENST00000484103 PRKAB2O43741 272 aa23.24■■□□□ 1.31
NDUFA3-213ENST00000484103 MBD4O95243 580 aa23.24■■□□□ 1.31
NDUFA3-213ENST00000484103 HERVK_113P62684 666 aa23.24■■□□□ 1.31
NDUFA3-213ENST00000484103 PDE3AQ14432 1141 aa23.24■■□□□ 1.31
NDUFA3-213ENST00000484103 TATDN1Q6P1N9 297 aa23.24■■□□□ 1.31
NDUFA3-213ENST00000484103 ACER1Q8TDN7 264 aa23.24■■□□□ 1.31
NDUFA3-213ENST00000484103 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.24■■□□□ 1.31
NDUFA3-213ENST00000484103 TXNRD2Q9NNW7 524 aa23.24■■□□□ 1.31
NDUFA3-213ENST00000484103 SHMT1P34896 483 aa23.23■■□□□ 1.31
NDUFA3-213ENST00000484103 USP17L2Q6R6M4 530 aa23.23■■□□□ 1.31
NDUFA3-213ENST00000484103 SLC44A5Q8NCS7 719 aa23.23■■□□□ 1.31
NDUFA3-213ENST00000484103 EHD4Q9H223 541 aa23.23■■□□□ 1.31
NDUFA3-213ENST00000484103 CABP5Q9NP86 173 aa23.23■■□□□ 1.31
NDUFA3-213ENST00000484103 DDX60LQ5H9U9 1706 aaKnown RBP23.22■■□□□ 1.31
NDUFA3-213ENST00000484103 GJB1P08034 283 aa23.22■■□□□ 1.31
NDUFA3-213ENST00000484103 TSHZ3Q63HK5 1081 aa23.22■■□□□ 1.31
NDUFA3-213ENST00000484103 U2AF1L4Q8WU68 220 aaKnown RBP23.22■■□□□ 1.31
NDUFA3-213ENST00000484103 GINM1Q9NU53 330 aa23.22■■□□□ 1.31
NDUFA3-213ENST00000484103 ATP5JP18859 108 aa23.21■■□□□ 1.31
NDUFA3-213ENST00000484103 CYP2B6P20813 491 aa23.21■■□□□ 1.31
NDUFA3-213ENST00000484103 ADD2P35612 726 aa23.21■■□□□ 1.31
NDUFA3-213ENST00000484103 GJA8P48165 433 aa23.21■■□□□ 1.31
NDUFA3-213ENST00000484103 IRF5Q13568 498 aa23.21■■□□□ 1.31
NDUFA3-213ENST00000484103 SEPT2Q15019 361 aa23.21■■□□□ 1.31
NDUFA3-213ENST00000484103 CCAR1Q8IX12 1150 aaKnown RBP23.21■■□□□ 1.31
NDUFA3-213ENST00000484103 NKX2-3Q8TAU0 364 aa23.21■■□□□ 1.31
NDUFA3-213ENST00000484103 DPF3Q92784 378 aa23.21■■□□□ 1.31
NDUFA3-213ENST00000484103 DYNLL2Q96FJ2 89 aa23.21■■□□□ 1.31
NDUFA3-213ENST00000484103 DEFB118Q96PH6 123 aa23.21■■□□□ 1.31
NDUFA3-213ENST00000484103 HAUS7Q99871 368 aa23.21■■□□□ 1.31
NDUFA3-213ENST00000484103 DCP1AQ9NPI6 582 aaPredicted RBP23.21■■□□□ 1.31
NDUFA3-213ENST00000484103 CYP2D7A0A087X1C5 515 aa23.2■■□□□ 1.3
NDUFA3-213ENST00000484103 TFRCP02786 760 aaKnown RBP23.2■■□□□ 1.3
NDUFA3-213ENST00000484103 HOXA7P31268 230 aaPredicted RBP23.2■■□□□ 1.3
NDUFA3-213ENST00000484103 TRIM32Q13049 653 aa23.2■■□□□ 1.3
NDUFA3-213ENST00000484103 GPRC5AQ8NFJ5 357 aa23.2■■□□□ 1.3
NDUFA3-213ENST00000484103 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.2■■□□□ 1.3
NDUFA3-213ENST00000484103 CWC22Q9HCG8 908 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms