RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 NBPF3Q9H094 633 aa10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 RRAGCQ9HB90 399 aa10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 PCDH10Q9P2E7 1040 aa10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 CYP46A1Q9Y6A2 500 aa10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 SIPA1L1O43166 1804 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 ST18O60284 1047 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 MCM5P33992 734 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 CDK8P49336 464 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 SART3Q15020 963 aaKnown RBP10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 ADCK5Q3MIX3 580 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 SUPT20HL1Q3ZLR7 823 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 RRP12Q5JTH9 1297 aaKnown RBP10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 STOX1Q6ZVD7 989 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 RUFY3Q7L099 469 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 CDC37L1Q7L3B6 337 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 KRT26Q7Z3Y9 468 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 IQCA1Q86XH1 822 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 ZNF444Q8N0Y2 327 aaPredicted RBP10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 ZNF526Q8TF50 670 aaPredicted RBP10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 CCDC17Q96LX7 622 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 KIF2CQ99661 725 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 MTA3Q9BTC8 594 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 GPBP1L1Q9HC44 474 aaPredicted RBP10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 ZSWIM6Q9HCJ5 1215 aa10.65□□□□□ -0.7
SHROOM4-204ENST00000483955 PLIN4Q96Q06 1357 aa10.65□□□□□ -0.71
SHROOM4-204ENST00000483955 ERICH2A1L162 156 aa10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 TSPY2A6NKD2 308 aa10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 B4E1Z4 1266 aa10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 RPS6KB1P23443 525 aa10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 NF2P35240 595 aa10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 MAP3K10Q02779 954 aa10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 CCDC178Q5BJE1 867 aa10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 PPP4R3BQ5MIZ7 849 aa10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 DHX32Q7L7V1 743 aaKnown RBP10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 MB21D2Q8IYB1 491 aaPredicted RBP10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 DYNLL2Q96FJ2 89 aa10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 TEPSINQ96N21 525 aa10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 NMRK2Q9NPI5 230 aa10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 TAF6LQ9Y6J9 622 aa10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 MYH8P13535 1937 aa10.64□□□□□ -0.71
SHROOM4-204ENST00000483955 SPDYE4A6NLX3 237 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 RANBP6O60518 1105 aaKnown RBP10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 KDM4AO75164 1064 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 PRDM1O75626 825 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 TSPY3P0CV98 308 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 TSPY8P0CW00 308 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 RASA1P20936 1047 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 SHMT1P34896 483 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 FGD1P98174 961 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 ANKRD1Q15327 319 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 CERKLQ49MI3 558 aaPredicted RBP10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 TATDN1Q6P1N9 297 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 STK11IPQ8N1F8 1099 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 SLC44A5Q8NCS7 719 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 TMEM87BQ96K49 555 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 UBAC1Q9BSL1 405 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 ZNF341Q9BYN7 854 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 UPF3BQ9BZI7 483 aaKnown RBP10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 DNAJC18Q9H819 358 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 GINM1Q9NU53 330 aa10.63□□□□□ -0.71
SHROOM4-204ENST00000483955 ADM5C9JUS6 153 aa10.62□□□□□ -0.71
SHROOM4-204ENST00000483955 SMIM22K7EJ46 135 aa10.62□□□□□ -0.71
SHROOM4-204ENST00000483955 PRC1O43663 620 aa10.62□□□□□ -0.71
SHROOM4-204ENST00000483955 ANP32AP39687 249 aaKnown RBP10.62□□□□□ -0.71
SHROOM4-204ENST00000483955 MCM2P49736 904 aa10.62□□□□□ -0.71
SHROOM4-204ENST00000483955 NEK4P51957 841 aa10.62□□□□□ -0.71
SHROOM4-204ENST00000483955 NBPF12Q5TAG4 269 aaPredicted RBP10.62□□□□□ -0.71
SHROOM4-204ENST00000483955 FBXL16Q8N461 479 aa10.62□□□□□ -0.71
SHROOM4-204ENST00000483955 CABP5Q9NP86 173 aa10.62□□□□□ -0.71
SHROOM4-204ENST00000483955 PDRG1Q9NUG6 133 aa10.62□□□□□ -0.71
SHROOM4-204ENST00000483955 SCAF8Q9UPN6 1271 aaKnown RBP10.62□□□□□ -0.71
SHROOM4-204ENST00000483955 FAM196BA6NMK8 535 aa10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 PPP1R12BO60237 982 aaPredicted RBP10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 POTEJP0CG39 1038 aa10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 TFAP4Q01664 338 aa10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 EXOSC10Q01780 885 aaKnown RBP10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 MAP1SQ66K74 1059 aaPredicted RBP10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 TMEM179Q6ZVK1 233 aa10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 USP48Q86UV5 1035 aa10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 CDAN1Q8IWY9 1227 aa10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 NEDD1Q8NHV4 660 aa10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 CDCA5Q96FF9 252 aa10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 TTC14Q96N46 770 aa10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 GLIS2Q9BZE0 524 aaPredicted RBP10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 ALDH8A1Q9H2A2 487 aaPredicted RBP10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 INCENPQ9NQS7 918 aa10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 TCP11L1Q9NUJ3 509 aa10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 ZSWIM5Q9P217 1185 aa10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 ANGEL1Q9UNK9 670 aaKnown RBP10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 TACC3Q9Y6A5 838 aa10.61□□□□□ -0.71
SHROOM4-204ENST00000483955 SSC5DA1L4H1 1573 aa10.6□□□□□ -0.71
SHROOM4-204ENST00000483955 TNKSO95271 1327 aa10.6□□□□□ -0.71
SHROOM4-204ENST00000483955 MPHOSPH10O00566 681 aaKnown RBP10.6□□□□□ -0.71
SHROOM4-204ENST00000483955 IFIT3O14879 490 aaKnown RBP10.6□□□□□ -0.71
SHROOM4-204ENST00000483955 ASNSP08243 561 aa10.6□□□□□ -0.71
SHROOM4-204ENST00000483955 CPA1P15085 419 aa10.6□□□□□ -0.71
SHROOM4-204ENST00000483955 AKR1B1P15121 316 aa10.6□□□□□ -0.71
SHROOM4-204ENST00000483955 YY1P25490 414 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms