RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 PFKFB2O60825 505 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 BAG4O95429 457 aaKnown RBP6.38□□□□□ -1.39
COL17A1-206ENST00000483876 PCP11498 1178 aaKnown RBP6.38□□□□□ -1.39
COL17A1-206ENST00000483876 SYN1P17600 705 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 MCM5P33992 734 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 TRDNQ13061 729 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 ME3Q16798 604 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 KIF4BQ2VIQ3 1234 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 TMEM31Q5JXX7 168 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 ANGEL2Q5VTE6 544 aaKnown RBP6.38□□□□□ -1.39
COL17A1-206ENST00000483876 SPRYD7Q5W111 196 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 C7orf61Q8IZ16 206 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 IFNL3Q8IZI9 196 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 MAGEB6Q8N7X4 407 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 TMX4Q9H1E5 349 aaPredicted RBP6.38□□□□□ -1.39
COL17A1-206ENST00000483876 SEMA6BQ9H3T3 888 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 CNNM2Q9H8M5 875 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 ANKIB1Q9P2G1 1089 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 ANAPC4Q9UJX5 808 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 SMC3Q9UQE7 1217 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 ATP6V1DQ9Y5K8 247 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 ASTN2O75129 1339 aaPredicted RBP6.37□□□□□ -1.39
COL17A1-206ENST00000483876 DHX16O60231 1041 aaKnown RBP6.37□□□□□ -1.39
COL17A1-206ENST00000483876 LDHCP07864 332 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 FGRP09769 529 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 CCL5P13501 91 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 IL1R1P14778 569 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 CPA1P15085 419 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 SYT1P21579 422 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 SLFNL1Q499Z3 407 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 TTLL5Q6EMB2 1281 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 OTUD7BQ6GQQ9 843 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 Q6ZUG5 572 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 STOX1Q6ZVD7 989 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 ZNF804AQ7Z570 1209 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 SLC51AQ86UW1 340 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 TMTC2Q8N394 836 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 SUPT20HQ8NEM7 779 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 U2AF1L4Q8WU68 220 aaKnown RBP6.37□□□□□ -1.39
COL17A1-206ENST00000483876 ATXN2LQ8WWM7 1075 aaKnown RBP6.37□□□□□ -1.39
COL17A1-206ENST00000483876 NSUN4Q96CB9 384 aaKnown RBP6.37□□□□□ -1.39
COL17A1-206ENST00000483876 ASB2Q96Q27 587 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 RNF208Q9H0X6 261 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 RNF41Q9H4P4 317 aaPredicted RBP6.37□□□□□ -1.39
COL17A1-206ENST00000483876 FOXD4L1Q9NU39 408 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 RAI14Q9P0K7 980 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 SUGT1Q9Y2Z0 365 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 ATP6V0A2Q9Y487 856 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 TAF6LQ9Y6J9 622 aa6.37□□□□□ -1.39
COL17A1-206ENST00000483876 MAGEB6P1A0A0J9YX57 407 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 YDJCA8MPS7 323 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 STX6O43752 255 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 TRAK2O60296 914 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 MBD4O95243 580 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 APPP05067 770 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 ZSCAN22P10073 491 aaPredicted RBP6.36□□□□□ -1.39
COL17A1-206ENST00000483876 CYP7A1P22680 504 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 LIFRP42702 1097 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 RCAN1P53805 252 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 PPP4CP60510 307 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 GSTO1P78417 241 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 GPSM2P81274 684 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 HMGN5P82970 282 aaKnown RBP6.36□□□□□ -1.39
COL17A1-206ENST00000483876 FGD1P98174 961 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 GSE1Q14687 1217 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 AKNAD1Q5T1N1 836 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 NAA16Q6N069 864 aaPredicted RBP6.36□□□□□ -1.39
COL17A1-206ENST00000483876 RALYLQ86SE5 291 aaKnown RBP6.36□□□□□ -1.39
COL17A1-206ENST00000483876 MB21D2Q8IYB1 491 aaPredicted RBP6.36□□□□□ -1.39
COL17A1-206ENST00000483876 USP38Q8NB14 1042 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 SMARCC2Q8TAQ2 1214 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 TBC1D22AQ8WUA7 517 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 BRF1Q92994 677 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 GTF3C6Q969F1 213 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 FAM163AQ96GL9 167 aaPredicted RBP6.36□□□□□ -1.39
COL17A1-206ENST00000483876 TMEM87BQ96K49 555 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 RIOK1Q9BRS2 568 aaKnown RBP6.36□□□□□ -1.39
COL17A1-206ENST00000483876 MRIQ9BWK5 157 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 KRT23Q9C075 422 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 COA1Q9GZY4 146 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 NAPBQ9H115 298 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 CD209Q9NNX6 404 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 ATP8A2Q9NTI2 1148 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 ABCF2Q9UG63 623 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 GGA1Q9UJY5 639 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 ISY1Q9ULR0 285 aaKnown RBP6.36□□□□□ -1.39
COL17A1-206ENST00000483876 NSFL1CQ9UNZ2 370 aaKnown RBP6.36□□□□□ -1.39
COL17A1-206ENST00000483876 KIF3AQ9Y496 699 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 SLC4A4Q9Y6R1 1079 aa6.36□□□□□ -1.39
COL17A1-206ENST00000483876 MYH7P12883 1935 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 FAM205AQ6ZU69 1335 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 DOCK2Q92608 1830 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 PSMD14O00487 310 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 SGPL1O95470 568 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 BAG3O95817 575 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 RPS12P25398 132 aaKnown RBP6.35□□□□□ -1.39
COL17A1-206ENST00000483876 GJB2P29033 226 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 PDIA3P30101 505 aaKnown RBP6.35□□□□□ -1.39
COL17A1-206ENST00000483876 NF2P35240 595 aa6.35□□□□□ -1.39
COL17A1-206ENST00000483876 MECOMQ03112 1051 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms