RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 ZSWIM5Q9P217 1185 aa16.72■□□□□ 0.27
SRSF6-202ENST00000483871 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.72■□□□□ 0.27
SRSF6-202ENST00000483871 ZNF112Q9UJU3 913 aa16.72■□□□□ 0.27
SRSF6-202ENST00000483871 PASKQ96RG2 1323 aa16.72■□□□□ 0.27
SRSF6-202ENST00000483871 UBE2Q2LH0YL09 131 aa16.71■□□□□ 0.27
SRSF6-202ENST00000483871 CAP2P40123 477 aa16.71■□□□□ 0.27
SRSF6-202ENST00000483871 RBM25P49756 843 aaKnown RBP16.71■□□□□ 0.27
SRSF6-202ENST00000483871 TFAP4Q01664 338 aa16.71■□□□□ 0.27
SRSF6-202ENST00000483871 TRDNQ13061 729 aa16.71■□□□□ 0.27
SRSF6-202ENST00000483871 NCOA7Q8NI08 942 aa16.71■□□□□ 0.27
SRSF6-202ENST00000483871 JAKMIP1Q96N16 626 aaKnown RBP16.71■□□□□ 0.27
SRSF6-202ENST00000483871 TBC1D32Q96NH3 1257 aa16.71■□□□□ 0.27
SRSF6-202ENST00000483871 NEK1Q96PY6 1258 aa16.71■□□□□ 0.27
SRSF6-202ENST00000483871 ZNF287Q9HBT7 754 aa16.71■□□□□ 0.27
SRSF6-202ENST00000483871 MPHOSPH10O00566 681 aaKnown RBP16.7■□□□□ 0.26
SRSF6-202ENST00000483871 CYB5R4Q7L1T6 521 aa16.7■□□□□ 0.26
SRSF6-202ENST00000483871 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.7■□□□□ 0.26
SRSF6-202ENST00000483871 KIF2CQ99661 725 aa16.7■□□□□ 0.26
SRSF6-202ENST00000483871 ZKSCAN3Q9BRR0 538 aa16.7■□□□□ 0.26
SRSF6-202ENST00000483871 GBA2Q9HCG7 927 aaPredicted RBP16.7■□□□□ 0.26
SRSF6-202ENST00000483871 MYH8P13535 1937 aa16.7■□□□□ 0.26
SRSF6-202ENST00000483871 TSPY2A6NKD2 308 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 NMT2O60551 498 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 GH2P01242 217 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 PCP11498 1178 aaKnown RBP16.69■□□□□ 0.26
SRSF6-202ENST00000483871 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.69■□□□□ 0.26
SRSF6-202ENST00000483871 RALYLQ86SE5 291 aaKnown RBP16.69■□□□□ 0.26
SRSF6-202ENST00000483871 CCDC84Q86UT8 332 aaPredicted RBP16.69■□□□□ 0.26
SRSF6-202ENST00000483871 MB21D2Q8IYB1 491 aaPredicted RBP16.69■□□□□ 0.26
SRSF6-202ENST00000483871 ESR2Q92731 530 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 TCEANC2Q96MN5 208 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.69■□□□□ 0.26
SRSF6-202ENST00000483871 KRT23Q9C075 422 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 CNNM2Q9H8M5 875 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 CTNND1O60716 968 aaKnown RBP16.69■□□□□ 0.26
SRSF6-202ENST00000483871 TSPY3P0CV98 308 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 TSPY8P0CW00 308 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 CASTP20810 708 aaKnown RBP16.69■□□□□ 0.26
SRSF6-202ENST00000483871 GUCY1A2P33402 732 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 IREB2P48200 963 aaKnown RBP16.69■□□□□ 0.26
SRSF6-202ENST00000483871 ANAPC15P60006 121 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 MAP3K9P80192 1104 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 FSTL1Q12841 308 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 KRT32Q14532 448 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 MAP3K11Q16584 847 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 ABCB5Q2M3G0 1257 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 ARMC9Q7Z3E5 817 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 CLEC10AQ8IUN9 316 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 C2orf69Q8N8R5 385 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 CCDC17Q96LX7 622 aa16.69■□□□□ 0.26
SRSF6-202ENST00000483871 UPF3BQ9BZI7 483 aaKnown RBP16.69■□□□□ 0.26
SRSF6-202ENST00000483871 ANTXR2P58335 489 aa16.68■□□□□ 0.26
SRSF6-202ENST00000483871 SEPT2Q15019 361 aa16.68■□□□□ 0.26
SRSF6-202ENST00000483871 CLMNQ96JQ2 1002 aa16.68■□□□□ 0.26
SRSF6-202ENST00000483871 LRRC2Q9BYS8 371 aa16.68■□□□□ 0.26
SRSF6-202ENST00000483871 IL17RBQ9NRM6 502 aa16.68■□□□□ 0.26
SRSF6-202ENST00000483871 TRPM7Q96QT4 1865 aa16.68■□□□□ 0.26
SRSF6-202ENST00000483871 VGLL4Q14135 290 aa16.67■□□□□ 0.26
SRSF6-202ENST00000483871 RAB3GAP1Q15042 981 aa16.67■□□□□ 0.26
SRSF6-202ENST00000483871 NEDD1Q8NHV4 660 aa16.67■□□□□ 0.26
SRSF6-202ENST00000483871 CABP5Q9NP86 173 aa16.67■□□□□ 0.26
SRSF6-202ENST00000483871 TAOK2Q9UL54 1235 aa16.67■□□□□ 0.26
SRSF6-202ENST00000483871 ZBTB21Q9ULJ3 1066 aa16.67■□□□□ 0.26
SRSF6-202ENST00000483871 PSMA5P28066 241 aa16.66■□□□□ 0.26
SRSF6-202ENST00000483871 LDLRAD1Q5T700 205 aa16.66■□□□□ 0.26
SRSF6-202ENST00000483871 SCYL3Q8IZE3 742 aa16.66■□□□□ 0.26
SRSF6-202ENST00000483871 IL17RAQ96F46 866 aa16.66■□□□□ 0.26
SRSF6-202ENST00000483871 ZSWIM6Q9HCJ5 1215 aa16.66■□□□□ 0.26
SRSF6-202ENST00000483871 GPHNQ9NQX3 736 aaPredicted RBP16.66■□□□□ 0.26
SRSF6-202ENST00000483871 EXOSC10Q01780 885 aaKnown RBP16.65■□□□□ 0.26
SRSF6-202ENST00000483871 BLOC1S2Q6QNY1 142 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 TMEM179Q6ZVK1 233 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 RUFY3Q7L099 469 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 DHX32Q7L7V1 743 aaKnown RBP16.65■□□□□ 0.26
SRSF6-202ENST00000483871 ANKRD13AQ8IZ07 590 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 CEP95Q96GE4 821 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 SNCAIPQ9Y6H5 919 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 PRC1O43663 620 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 ASNSP08243 561 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 RPS6KB1P23443 525 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 MCM5P33992 734 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 FKBP1BP68106 108 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 SIAH1Q8IUQ4 282 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 TM6SF1Q9BZW5 370 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 ELP3Q9H9T3 547 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 CSADQ9Y600 493 aa16.65■□□□□ 0.26
SRSF6-202ENST00000483871 ATAD5Q96QE3 1844 aa16.64■□□□□ 0.25
SRSF6-202ENST00000483871 IGKV6D-41A0A0C4DH26 115 aa16.64■□□□□ 0.25
SRSF6-202ENST00000483871 PTPRAP18433 802 aa16.64■□□□□ 0.25
SRSF6-202ENST00000483871 HUNKP57058 714 aa16.64■□□□□ 0.25
SRSF6-202ENST00000483871 NOL9Q5SY16 702 aaKnown RBP16.64■□□□□ 0.25
SRSF6-202ENST00000483871 IQCA1Q86XH1 822 aa16.64■□□□□ 0.25
SRSF6-202ENST00000483871 IGDCC4Q8TDY8 1250 aa16.64■□□□□ 0.25
SRSF6-202ENST00000483871 ZSCAN10Q96SZ4 725 aaPredicted RBP16.64■□□□□ 0.25
SRSF6-202ENST00000483871 SENP2Q9HC62 589 aa16.64■□□□□ 0.25
SRSF6-202ENST00000483871 CYP46A1Q9Y6A2 500 aa16.64■□□□□ 0.25
SRSF6-202ENST00000483871 OTOFQ9HC10 1997 aa16.64■□□□□ 0.25
SRSF6-202ENST00000483871 PAPPA2Q9BXP8 1791 aa16.64■□□□□ 0.25
SRSF6-202ENST00000483871 TMEM88BA6NKF7 163 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms