RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 BRCA1P38398 1863 aaKnown RBP15.65■□□□□ 0.1
RXRB-205ENST00000483821 LAMB1P07942 1786 aa15.64■□□□□ 0.1
RXRB-205ENST00000483821 SCN9AQ15858 1988 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 VPS37CA5D8V6 355 aaPredicted RBP15.64■□□□□ 0.09
RXRB-205ENST00000483821 SPDYE2BA6NHP3 402 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 BAG4O95429 457 aaKnown RBP15.64■□□□□ 0.09
RXRB-205ENST00000483821 SPDYE6P0CI01 402 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 RASA1P20936 1047 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 PKP1Q13835 747 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 FER1L6Q2WGJ9 1857 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 FAM47AQ5JRC9 791 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 TRIM22Q8IYM9 498 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 FANCBQ8NB91 859 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 NAV1Q8NEY1 1877 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 NEDD1Q8NHV4 660 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 DPF2Q92785 391 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 DDX11Q96FC9 970 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 CCDC17Q96LX7 622 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 FHDC1Q9C0D6 1143 aaPredicted RBP15.64■□□□□ 0.09
RXRB-205ENST00000483821 KAT14Q9H8E8 782 aa15.64■□□□□ 0.09
RXRB-205ENST00000483821 DDX4Q9NQI0 724 aaKnown RBP15.64■□□□□ 0.09
RXRB-205ENST00000483821 SMIM22K7EJ46 135 aa15.63■□□□□ 0.09
RXRB-205ENST00000483821 FZD9O00144 591 aa15.63■□□□□ 0.09
RXRB-205ENST00000483821 JAK2O60674 1132 aa15.63■□□□□ 0.09
RXRB-205ENST00000483821 CTDNEP1O95476 244 aa15.63■□□□□ 0.09
RXRB-205ENST00000483821 KIF5BP33176 963 aa15.63■□□□□ 0.09
RXRB-205ENST00000483821 GABPAQ06546 454 aa15.63■□□□□ 0.09
RXRB-205ENST00000483821 SLC4A8Q2Y0W8 1093 aa15.63■□□□□ 0.09
RXRB-205ENST00000483821 ARHGAP27Q6ZUM4 889 aa15.63■□□□□ 0.09
RXRB-205ENST00000483821 ZSCAN29Q8IWY8 852 aaPredicted RBP15.63■□□□□ 0.09
RXRB-205ENST00000483821 CRACR2BQ8N4Y2 399 aaPredicted RBP15.63■□□□□ 0.09
RXRB-205ENST00000483821 NKX2-3Q8TAU0 364 aa15.63■□□□□ 0.09
RXRB-205ENST00000483821 PRMT6Q96LA8 375 aaPredicted RBP15.63■□□□□ 0.09
RXRB-205ENST00000483821 MAP3K14Q99558 947 aa15.63■□□□□ 0.09
RXRB-205ENST00000483821 TDRD3Q9H7E2 651 aaKnown RBP15.63■□□□□ 0.09
RXRB-205ENST00000483821 ORC3Q9UBD5 711 aaPredicted RBP15.63■□□□□ 0.09
RXRB-205ENST00000483821 MTMR6Q9Y217 621 aa15.63■□□□□ 0.09
RXRB-205ENST00000483821 PSME4Q14997 1843 aa15.62■□□□□ 0.09
RXRB-205ENST00000483821 F13A1P00488 732 aa15.62■□□□□ 0.09
RXRB-205ENST00000483821 IFNAR1P17181 557 aa15.62■□□□□ 0.09
RXRB-205ENST00000483821 LMNB1P20700 586 aa15.62■□□□□ 0.09
RXRB-205ENST00000483821 GNAQP50148 359 aa15.62■□□□□ 0.09
RXRB-205ENST00000483821 SSRP1Q08945 709 aaKnown RBP15.62■□□□□ 0.09
RXRB-205ENST00000483821 CSPP1Q1MSJ5 1256 aa15.62■□□□□ 0.09
RXRB-205ENST00000483821 SKOR2Q2VWA4 1001 aaPredicted RBP15.62■□□□□ 0.09
RXRB-205ENST00000483821 CTCFLQ8NI51 663 aaPredicted RBP15.62■□□□□ 0.09
RXRB-205ENST00000483821 NUP133Q8WUM0 1156 aa15.62■□□□□ 0.09
RXRB-205ENST00000483821 ZSCAN16Q9H4T2 348 aaPredicted RBP15.62■□□□□ 0.09
RXRB-205ENST00000483821 SENP2Q9HC62 589 aa15.62■□□□□ 0.09
RXRB-205ENST00000483821 COL2A1P02458 1487 aaPredicted RBP15.62■□□□□ 0.09
RXRB-205ENST00000483821 STK36Q9NRP7 1315 aa15.62■□□□□ 0.09
RXRB-205ENST00000483821 ADD1P35611 737 aaKnown RBP15.61■□□□□ 0.09
RXRB-205ENST00000483821 ZNF280AP59817 542 aaPredicted RBP15.61■□□□□ 0.09
RXRB-205ENST00000483821 AKAP17AQ02040 695 aaKnown RBP15.61■□□□□ 0.09
RXRB-205ENST00000483821 TCP10Q12799 353 aa15.61■□□□□ 0.09
RXRB-205ENST00000483821 NFIAQ12857 509 aa15.61■□□□□ 0.09
RXRB-205ENST00000483821 SPDYE2Q495Y8 402 aa15.61■□□□□ 0.09
RXRB-205ENST00000483821 FOXD4L5Q5VV16 416 aaPredicted RBP15.61■□□□□ 0.09
RXRB-205ENST00000483821 FOXD4L4Q8WXT5 416 aaPredicted RBP15.61■□□□□ 0.09
RXRB-205ENST00000483821 ZNF70Q9UC06 446 aaPredicted RBP15.61■□□□□ 0.09
RXRB-205ENST00000483821 FAM198AQ9UFP1 575 aa15.61■□□□□ 0.09
RXRB-205ENST00000483821 ZBTB12Q9Y330 459 aaPredicted RBP15.61■□□□□ 0.09
RXRB-205ENST00000483821 ARFGEF1Q9Y6D6 1849 aa15.6■□□□□ 0.09
RXRB-205ENST00000483821 FMNL1O95466 1100 aaPredicted RBP15.6■□□□□ 0.09
RXRB-205ENST00000483821 TOP1P11387 765 aaKnown RBP15.6■□□□□ 0.09
RXRB-205ENST00000483821 TNNI2P48788 182 aa15.6■□□□□ 0.09
RXRB-205ENST00000483821 RASSF7Q02833 373 aa15.6■□□□□ 0.09
RXRB-205ENST00000483821 EVX2Q03828 476 aa15.6■□□□□ 0.09
RXRB-205ENST00000483821 TRIM29Q14134 588 aa15.6■□□□□ 0.09
RXRB-205ENST00000483821 SLC44A5Q8NCS7 719 aa15.6■□□□□ 0.09
RXRB-205ENST00000483821 FAM151AQ8WW52 585 aa15.6■□□□□ 0.09
RXRB-205ENST00000483821 C8orf76Q96K31 380 aa15.6■□□□□ 0.09
RXRB-205ENST00000483821 LZTS2Q9BRK4 669 aa15.6■□□□□ 0.09
RXRB-205ENST00000483821 SYT17Q9BSW7 474 aa15.6■□□□□ 0.09
RXRB-205ENST00000483821 MYOZ2Q9NPC6 264 aa15.6■□□□□ 0.09
RXRB-205ENST00000483821 IL17RBQ9NRM6 502 aa15.6■□□□□ 0.09
RXRB-205ENST00000483821 RBM27Q9P2N5 1060 aaKnown RBP15.6■□□□□ 0.09
RXRB-205ENST00000483821 COL4A5P29400 1685 aa15.6■□□□□ 0.09
RXRB-205ENST00000483821 ATRNL1Q5VV63 1379 aa15.6■□□□□ 0.09
RXRB-205ENST00000483821 FOCADQ5VW36 1801 aa15.59■□□□□ 0.09
RXRB-205ENST00000483821 MYH1P12882 1939 aa15.59■□□□□ 0.09
RXRB-205ENST00000483821 CDC27P30260 824 aa15.59■□□□□ 0.09
RXRB-205ENST00000483821 TROAPQ12815 778 aa15.59■□□□□ 0.09
RXRB-205ENST00000483821 TNFAIP1Q13829 316 aa15.59■□□□□ 0.09
RXRB-205ENST00000483821 NTRK3Q16288 839 aa15.59■□□□□ 0.09
RXRB-205ENST00000483821 MCTP1Q6DN14 999 aa15.59■□□□□ 0.09
RXRB-205ENST00000483821 FAM83AQ86UY5 434 aa15.59■□□□□ 0.09
RXRB-205ENST00000483821 RAB11FIP4Q86YS3 637 aa15.59■□□□□ 0.09
RXRB-205ENST00000483821 CCDC144CPQ8IYA2 1237 aa15.59■□□□□ 0.09
RXRB-205ENST00000483821 ZBED3Q96IU2 234 aaPredicted RBP15.59■□□□□ 0.09
RXRB-205ENST00000483821 MYL10Q9BUA6 226 aa15.59■□□□□ 0.09
RXRB-205ENST00000483821 FAM217BQ9NTX9 383 aaPredicted RBP15.59■□□□□ 0.09
RXRB-205ENST00000483821 HERC5Q9UII4 1024 aaKnown RBP15.59■□□□□ 0.09
RXRB-205ENST00000483821 PLIN4Q96Q06 1357 aa15.59■□□□□ 0.09
RXRB-205ENST00000483821 ZNF646O15015 1829 aaPredicted RBP15.59■□□□□ 0.09
RXRB-205ENST00000483821 DDX60LQ5H9U9 1706 aaKnown RBP15.58■□□□□ 0.08
RXRB-205ENST00000483821 H7C1D1 291 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 NMT2O60551 498 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 DEXIO95424 95 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 FDPSP14324 419 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms