RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TBC1D2Q9BYX2 928 aa21.97■■□□□ 1.11
ATG4B-221ENST00000483778 ZBTB21Q9ULJ3 1066 aa21.97■■□□□ 1.11
ATG4B-221ENST00000483778 H0YGN5 161 aa21.96■■□□□ 1.11
ATG4B-221ENST00000483778 INHAP05111 366 aa21.96■■□□□ 1.11
ATG4B-221ENST00000483778 ASNSP08243 561 aa21.96■■□□□ 1.11
ATG4B-221ENST00000483778 FAM110CQ1W6H9 321 aa21.96■■□□□ 1.11
ATG4B-221ENST00000483778 EDC3Q96F86 508 aaKnown RBP21.96■■□□□ 1.11
ATG4B-221ENST00000483778 AS3MTQ9HBK9 375 aa21.96■■□□□ 1.11
ATG4B-221ENST00000483778 GJD2Q9UKL4 321 aa21.96■■□□□ 1.11
ATG4B-221ENST00000483778 PNMA3Q9UL41 463 aa21.96■■□□□ 1.11
ATG4B-221ENST00000483778 TAOK2Q9UL54 1235 aa21.96■■□□□ 1.11
ATG4B-221ENST00000483778 USP5P45974 858 aa21.95■■□□□ 1.1
ATG4B-221ENST00000483778 GCLCP48506 637 aaPredicted RBP21.95■■□□□ 1.1
ATG4B-221ENST00000483778 IRF5Q13568 498 aa21.95■■□□□ 1.1
ATG4B-221ENST00000483778 SLFNL1Q499Z3 407 aa21.95■■□□□ 1.1
ATG4B-221ENST00000483778 RIOK1Q9BRS2 568 aaKnown RBP21.95■■□□□ 1.1
ATG4B-221ENST00000483778 TXNRD2Q9NNW7 524 aa21.95■■□□□ 1.1
ATG4B-221ENST00000483778 EMILIN3Q9NT22 766 aa21.95■■□□□ 1.1
ATG4B-221ENST00000483778 IGSF3O75054 1194 aa21.94■■□□□ 1.1
ATG4B-221ENST00000483778 GH2P01242 217 aa21.94■■□□□ 1.1
ATG4B-221ENST00000483778 PLCD1P51178 756 aa21.94■■□□□ 1.1
ATG4B-221ENST00000483778 UBXN2AP68543 259 aa21.94■■□□□ 1.1
ATG4B-221ENST00000483778 MAP3K12Q12852 859 aa21.94■■□□□ 1.1
ATG4B-221ENST00000483778 C20orf194Q5TEA3 1177 aa21.94■■□□□ 1.1
ATG4B-221ENST00000483778 TATDN1Q6P1N9 297 aa21.94■■□□□ 1.1
ATG4B-221ENST00000483778 U2AF1L4Q8WU68 220 aaKnown RBP21.94■■□□□ 1.1
ATG4B-221ENST00000483778 TRIM34Q9BYJ4 488 aa21.94■■□□□ 1.1
ATG4B-221ENST00000483778 USP17L10C9JJH3 530 aa21.93■■□□□ 1.1
ATG4B-221ENST00000483778 HOXA7P31268 230 aaPredicted RBP21.93■■□□□ 1.1
ATG4B-221ENST00000483778 TRIM32Q13049 653 aa21.93■■□□□ 1.1
ATG4B-221ENST00000483778 Q3C1V9 767 aa21.93■■□□□ 1.1
ATG4B-221ENST00000483778 RPAP2Q8IXW5 612 aaPredicted RBP21.93■■□□□ 1.1
ATG4B-221ENST00000483778 PXYLP1Q8TE99 480 aa21.93■■□□□ 1.1
ATG4B-221ENST00000483778 COA7Q96BR5 231 aa21.93■■□□□ 1.1
ATG4B-221ENST00000483778 TRIOBPQ9H2D6 2365 aa21.93■■□□□ 1.1
ATG4B-221ENST00000483778 RBPJLQ9UBG7 517 aa21.93■■□□□ 1.1
ATG4B-221ENST00000483778 COLQQ9Y215 455 aaPredicted RBP21.93■■□□□ 1.1
ATG4B-221ENST00000483778 BAZ2AQ9UIF9 1905 aaKnown RBP21.92■■□□□ 1.1
ATG4B-221ENST00000483778 NAV1Q8NEY1 1877 aa21.92■■□□□ 1.1
ATG4B-221ENST00000483778 DDX60LQ5H9U9 1706 aaKnown RBP21.92■■□□□ 1.1
ATG4B-221ENST00000483778 C19orf81C9J6K1 198 aa21.92■■□□□ 1.1
ATG4B-221ENST00000483778 SGPL1O95470 568 aa21.92■■□□□ 1.1
ATG4B-221ENST00000483778 HLA-DOAP06340 250 aa21.92■■□□□ 1.1
ATG4B-221ENST00000483778 PDE6AP16499 860 aa21.92■■□□□ 1.1
ATG4B-221ENST00000483778 PABPC4Q13310 644 aaKnown RBP eCLIP21.92■■□□□ 1.1
ATG4B-221ENST00000483778 HSP90AB4PQ58FF6 505 aa21.92■■□□□ 1.1
ATG4B-221ENST00000483778 GCC1Q96CN9 775 aa21.92■■□□□ 1.1
ATG4B-221ENST00000483778 TMOD4Q9NZQ9 345 aa21.92■■□□□ 1.1
ATG4B-221ENST00000483778 MORF4L1Q9UBU8 362 aa21.92■■□□□ 1.1
ATG4B-221ENST00000483778 ALPK3Q96L96 1907 aa21.92■■□□□ 1.1
ATG4B-221ENST00000483778 TCRBV5S4A2TA0A5A2 114 aa21.91■■□□□ 1.1
ATG4B-221ENST00000483778 GOLIM4O00461 696 aa21.91■■□□□ 1.1
ATG4B-221ENST00000483778 CHGBP05060 677 aa21.91■■□□□ 1.1
ATG4B-221ENST00000483778 SLC9C2Q5TAH2 1124 aa21.91■■□□□ 1.1
ATG4B-221ENST00000483778 NKX2-3Q8TAU0 364 aa21.91■■□□□ 1.1
ATG4B-221ENST00000483778 ACER1Q8TDN7 264 aa21.91■■□□□ 1.1
ATG4B-221ENST00000483778 KIF1BPQ96EK5 621 aa21.91■■□□□ 1.1
ATG4B-221ENST00000483778 DEFB118Q96PH6 123 aa21.91■■□□□ 1.1
ATG4B-221ENST00000483778 RCAN3Q9UKA8 241 aa21.91■■□□□ 1.1
ATG4B-221ENST00000483778 MAGEB6P1A0A0J9YX57 407 aa21.9■■□□□ 1.1
ATG4B-221ENST00000483778 MS4A1P11836 297 aa21.9■■□□□ 1.1
ATG4B-221ENST00000483778 SHMT1P34896 483 aa21.9■■□□□ 1.1
ATG4B-221ENST00000483778 HERVK_113P62684 666 aa21.9■■□□□ 1.1
ATG4B-221ENST00000483778 IRX3P78415 501 aaPredicted RBP21.9■■□□□ 1.1
ATG4B-221ENST00000483778 ZYXQ15942 572 aaKnown RBP21.9■■□□□ 1.1
ATG4B-221ENST00000483778 CLASRPQ8N2M8 674 aaKnown RBP21.9■■□□□ 1.1
ATG4B-221ENST00000483778 DPF3Q92784 378 aa21.9■■□□□ 1.1
ATG4B-221ENST00000483778 DNAJC2Q99543 621 aaKnown RBP21.9■■□□□ 1.1
ATG4B-221ENST00000483778 GINM1Q9NU53 330 aa21.9■■□□□ 1.1
ATG4B-221ENST00000483778 SERPINB13Q9UIV8 391 aa21.9■■□□□ 1.1
ATG4B-221ENST00000483778 DDX19BQ9UMR2 479 aa21.9■■□□□ 1.1
ATG4B-221ENST00000483778 ZNF532Q9HCE3 1301 aa21.89■■□□□ 1.1
ATG4B-221ENST00000483778 GUCY1A2P33402 732 aa21.89■■□□□ 1.09
ATG4B-221ENST00000483778 EHD4Q9H223 541 aa21.89■■□□□ 1.09
ATG4B-221ENST00000483778 PAK6Q9NQU5 681 aaPredicted RBP21.89■■□□□ 1.09
ATG4B-221ENST00000483778 MYH7P12883 1935 aa21.88■■□□□ 1.09
ATG4B-221ENST00000483778 SMIM22K7EJ46 135 aa21.88■■□□□ 1.09
ATG4B-221ENST00000483778 TFRCP02786 760 aaKnown RBP21.88■■□□□ 1.09
ATG4B-221ENST00000483778 IFIT2P09913 472 aaKnown RBP21.88■■□□□ 1.09
ATG4B-221ENST00000483778 CYP2D6P10635 497 aa21.88■■□□□ 1.09
ATG4B-221ENST00000483778 CERKLQ49MI3 558 aaPredicted RBP21.88■■□□□ 1.09
ATG4B-221ENST00000483778 USP17L2Q6R6M4 530 aa21.88■■□□□ 1.09
ATG4B-221ENST00000483778 BOLA2Q9H3K6 86 aa21.88■■□□□ 1.09
ATG4B-221ENST00000483778 MYH8P13535 1937 aa21.87■■□□□ 1.09
ATG4B-221ENST00000483778 FARP2O94887 1054 aaPredicted RBP21.87■■□□□ 1.09
ATG4B-221ENST00000483778 GABPAQ06546 454 aa21.87■■□□□ 1.09
ATG4B-221ENST00000483778 RAB3GAP1Q15042 981 aa21.87■■□□□ 1.09
ATG4B-221ENST00000483778 TTF1Q15361 905 aaPredicted RBP21.87■■□□□ 1.09
ATG4B-221ENST00000483778 TTC6Q86TZ1 520 aa21.87■■□□□ 1.09
ATG4B-221ENST00000483778 LCORLQ8N3X6 602 aa21.87■■□□□ 1.09
ATG4B-221ENST00000483778 GPRC5AQ8NFJ5 357 aa21.87■■□□□ 1.09
ATG4B-221ENST00000483778 SDR42E1Q8WUS8 393 aa21.87■■□□□ 1.09
ATG4B-221ENST00000483778 PORCNQ9H237 461 aa21.87■■□□□ 1.09
ATG4B-221ENST00000483778 PRKAB2O43741 272 aa21.86■■□□□ 1.09
ATG4B-221ENST00000483778 SMARCA5O60264 1052 aaPredicted RBP21.86■■□□□ 1.09
ATG4B-221ENST00000483778 HMMRO75330 724 aa21.86■■□□□ 1.09
ATG4B-221ENST00000483778 CYP2B6P20813 491 aa21.86■■□□□ 1.09
ATG4B-221ENST00000483778 ABCB5Q2M3G0 1257 aa21.86■■□□□ 1.09
ATG4B-221ENST00000483778 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.86■■□□□ 1.09
ATG4B-221ENST00000483778 TRIB2Q92519 343 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms