RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 SAP30BPQ9UHR5 308 aaKnown RBP24.09■■□□□ 1.45
HPS4-213ENST00000483631 SERPINB13Q9UIV8 391 aa24.09■■□□□ 1.45
HPS4-213ENST00000483631 ZBTB21Q9ULJ3 1066 aa24.09■■□□□ 1.45
HPS4-213ENST00000483631 DDX60LQ5H9U9 1706 aaKnown RBP24.09■■□□□ 1.45
HPS4-213ENST00000483631 PDE6AP16499 860 aa24.08■■□□□ 1.45
HPS4-213ENST00000483631 HOXA7P31268 230 aaPredicted RBP24.08■■□□□ 1.45
HPS4-213ENST00000483631 PRKCZQ05513 592 aa24.08■■□□□ 1.45
HPS4-213ENST00000483631 SLC9C2Q5TAH2 1124 aa24.08■■□□□ 1.45
HPS4-213ENST00000483631 TAOK2Q9UL54 1235 aa24.08■■□□□ 1.45
HPS4-213ENST00000483631 NAV1Q8NEY1 1877 aa24.07■■□□□ 1.44
HPS4-213ENST00000483631 MAGEB6P1A0A0J9YX57 407 aa24.07■■□□□ 1.44
HPS4-213ENST00000483631 USP17L10C9JJH3 530 aa24.07■■□□□ 1.44
HPS4-213ENST00000483631 APBB1O00213 710 aa24.07■■□□□ 1.44
HPS4-213ENST00000483631 ATP5JP18859 108 aa24.07■■□□□ 1.44
HPS4-213ENST00000483631 IRF5Q13568 498 aa24.07■■□□□ 1.44
HPS4-213ENST00000483631 TMOD4Q9NZQ9 345 aa24.07■■□□□ 1.44
HPS4-213ENST00000483631 BRCA2P51587 3418 aa24.06■■□□□ 1.44
HPS4-213ENST00000483631 TNPO2O14787 897 aaKnown RBP24.06■■□□□ 1.44
HPS4-213ENST00000483631 MTMR2Q13614 643 aa24.06■■□□□ 1.44
HPS4-213ENST00000483631 ANKRD13CQ8N6S4 541 aa24.06■■□□□ 1.44
HPS4-213ENST00000483631 PXYLP1Q8TE99 480 aa24.06■■□□□ 1.44
HPS4-213ENST00000483631 CRNKL1Q9BZJ0 848 aaKnown RBP24.06■■□□□ 1.44
HPS4-213ENST00000483631 ASCC2Q9H1I8 757 aaPredicted RBP24.06■■□□□ 1.44
HPS4-213ENST00000483631 GOLIM4O00461 696 aa24.05■■□□□ 1.44
HPS4-213ENST00000483631 GDF11O95390 407 aa24.05■■□□□ 1.44
HPS4-213ENST00000483631 UBXN2AP68543 259 aa24.05■■□□□ 1.44
HPS4-213ENST00000483631 JAG1P78504 1218 aa24.05■■□□□ 1.44
HPS4-213ENST00000483631 C20orf194Q5TEA3 1177 aa24.05■■□□□ 1.44
HPS4-213ENST00000483631 NKX2-3Q8TAU0 364 aa24.05■■□□□ 1.44
HPS4-213ENST00000483631 COA7Q96BR5 231 aa24.05■■□□□ 1.44
HPS4-213ENST00000483631 DNAJC2Q99543 621 aaKnown RBP24.05■■□□□ 1.44
HPS4-213ENST00000483631 LRRCC1Q9C099 1032 aa24.05■■□□□ 1.44
HPS4-213ENST00000483631 MYH7P12883 1935 aa24.05■■□□□ 1.44
HPS4-213ENST00000483631 TCRBV5S4A2TA0A5A2 114 aa24.04■■□□□ 1.44
HPS4-213ENST00000483631 ECM2O94769 699 aaPredicted RBP24.04■■□□□ 1.44
HPS4-213ENST00000483631 CAPN2P17655 700 aa24.04■■□□□ 1.44
HPS4-213ENST00000483631 PAG1Q9NWQ8 432 aa24.04■■□□□ 1.44
HPS4-213ENST00000483631 MORF4L1Q9UBU8 362 aa24.04■■□□□ 1.44
HPS4-213ENST00000483631 ZNF532Q9HCE3 1301 aa24.04■■□□□ 1.44
HPS4-213ENST00000483631 FLT3LGP49771 235 aa24.03■■□□□ 1.44
HPS4-213ENST00000483631 IRX3P78415 501 aaPredicted RBP24.03■■□□□ 1.44
HPS4-213ENST00000483631 GTF3C2Q8WUA4 911 aaPredicted RBP24.03■■□□□ 1.44
HPS4-213ENST00000483631 HAUS7Q99871 368 aa24.03■■□□□ 1.44
HPS4-213ENST00000483631 GABRQQ9UN88 632 aa24.03■■□□□ 1.44
HPS4-213ENST00000483631 MKI67P46013 3256 aaKnown RBP24.02■■□□□ 1.44
HPS4-213ENST00000483631 GH2P01242 217 aa24.02■■□□□ 1.44
HPS4-213ENST00000483631 GJB1P08034 283 aa24.02■■□□□ 1.44
HPS4-213ENST00000483631 USP17L2Q6R6M4 530 aa24.02■■□□□ 1.44
HPS4-213ENST00000483631 C12orf42Q96LP6 360 aa24.02■■□□□ 1.44
HPS4-213ENST00000483631 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.02■■□□□ 1.441e-6■■□□□ 12.5
HPS4-213ENST00000483631 ADCY3O60266 1144 aa24.01■■□□□ 1.43
HPS4-213ENST00000483631 GABPAQ06546 454 aa24.01■■□□□ 1.43
HPS4-213ENST00000483631 MTFR1Q15390 333 aa24.01■■□□□ 1.43
HPS4-213ENST00000483631 CERKLQ49MI3 558 aaPredicted RBP24.01■■□□□ 1.43
HPS4-213ENST00000483631 BOLA2Q9H3K6 86 aa24.01■■□□□ 1.43
HPS4-213ENST00000483631 POLR3DP05423 398 aaPredicted RBP24■■□□□ 1.43
HPS4-213ENST00000483631 ADD2P35612 726 aa24■■□□□ 1.43
HPS4-213ENST00000483631 SHROOM1Q2M3G4 852 aaPredicted RBP24■■□□□ 1.43
HPS4-213ENST00000483631 CABP5Q9NP86 173 aa24■■□□□ 1.43
HPS4-213ENST00000483631 BIN2Q9UBW5 565 aaPredicted RBP24■■□□□ 1.43
HPS4-213ENST00000483631 MYCP01106 439 aaPredicted RBP23.99■■□□□ 1.43
HPS4-213ENST00000483631 CCL5P13501 91 aa23.99■■□□□ 1.43
HPS4-213ENST00000483631 SHMT1P34896 483 aa23.99■■□□□ 1.43
HPS4-213ENST00000483631 GJA8P48165 433 aa23.99■■□□□ 1.43
HPS4-213ENST00000483631 PLCD1P51178 756 aa23.99■■□□□ 1.43
HPS4-213ENST00000483631 USP14P54578 494 aa23.99■■□□□ 1.43
HPS4-213ENST00000483631 UBE3CQ15386 1083 aa23.99■■□□□ 1.43
HPS4-213ENST00000483631 ABCB5Q2M3G0 1257 aa23.99■■□□□ 1.43
HPS4-213ENST00000483631 GCC1Q96CN9 775 aa23.99■■□□□ 1.43
HPS4-213ENST00000483631 DCTPP1Q9H773 170 aa23.99■■□□□ 1.43
HPS4-213ENST00000483631 DCP1AQ9NPI6 582 aaPredicted RBP23.99■■□□□ 1.43
HPS4-213ENST00000483631 EMILIN3Q9NT22 766 aa23.99■■□□□ 1.43
HPS4-213ENST00000483631 MCM9Q9NXL9 1143 aa23.99■■□□□ 1.43
HPS4-213ENST00000483631 HERVK_113P62684 666 aa23.98■■□□□ 1.43
HPS4-213ENST00000483631 ZSCAN25Q6NSZ9 544 aa23.98■■□□□ 1.43
HPS4-213ENST00000483631 EDC3Q96F86 508 aaKnown RBP23.98■■□□□ 1.43
HPS4-213ENST00000483631 P2RX7Q99572 595 aaKnown RBP23.98■■□□□ 1.43
HPS4-213ENST00000483631 KIAA1683Q9H0B3 1180 aa23.98■■□□□ 1.43
HPS4-213ENST00000483631 RNF208Q9H0X6 261 aa23.98■■□□□ 1.43
HPS4-213ENST00000483631 ATP8A2Q9NTI2 1148 aa23.98■■□□□ 1.43
HPS4-213ENST00000483631 MYH8P13535 1937 aa23.98■■□□□ 1.43
HPS4-213ENST00000483631 LCORLQ8N3X6 602 aa23.97■■□□□ 1.43
HPS4-213ENST00000483631 SHISA4Q96DD7 197 aa23.97■■□□□ 1.43
HPS4-213ENST00000483631 GPRC5AQ8NFJ5 357 aa23.96■■□□□ 1.43
HPS4-213ENST00000483631 FEZ1Q99689 392 aa23.96■■□□□ 1.43
HPS4-213ENST00000483631 SWAP70Q9UH65 585 aa23.96■■□□□ 1.43
HPS4-213ENST00000483631 GJD2Q9UKL4 321 aa23.96■■□□□ 1.43
HPS4-213ENST00000483631 INHAP05111 366 aa23.95■■□□□ 1.42
HPS4-213ENST00000483631 RAB3GAP1Q15042 981 aa23.95■■□□□ 1.42
HPS4-213ENST00000483631 SDR42E1Q8WUS8 393 aa23.95■■□□□ 1.42
HPS4-213ENST00000483631 ECHDC1Q9NTX5 307 aa23.95■■□□□ 1.42
HPS4-213ENST00000483631 BAZ2AQ9UIF9 1905 aaKnown RBP23.94■■□□□ 1.42
HPS4-213ENST00000483631 PLXNB2O15031 1838 aa23.94■■□□□ 1.42
HPS4-213ENST00000483631 USP17L15C9J2P7 530 aa23.94■■□□□ 1.42
HPS4-213ENST00000483631 USP17L13C9JLJ4 530 aa23.94■■□□□ 1.42
HPS4-213ENST00000483631 USP17L11C9JVI0 530 aa23.94■■□□□ 1.42
HPS4-213ENST00000483631 USP17L18D6R9N7 530 aa23.94■■□□□ 1.42
HPS4-213ENST00000483631 USP17L22D6RA61 530 aa23.94■■□□□ 1.42
HPS4-213ENST00000483631 USP17L17D6RBQ6 530 aa23.94■■□□□ 1.42
HPS4-213ENST00000483631 USP17L19D6RCP7 530 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms