RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 GNAT2P19087 354 aa21.62■■□□□ 1.05
HDAC6-225ENST00000483506 C12orf60Q5U649 245 aa21.62■■□□□ 1.05
HDAC6-225ENST00000483506 ZNF280CQ8ND82 737 aa21.62■■□□□ 1.05
HDAC6-225ENST00000483506 DDRGK1Q96HY6 314 aa21.62■■□□□ 1.05
HDAC6-225ENST00000483506 WDR18Q9BV38 432 aa21.62■■□□□ 1.05
HDAC6-225ENST00000483506 ZBTB21Q9ULJ3 1066 aa21.62■■□□□ 1.05
HDAC6-225ENST00000483506 CYP2D6P10635 497 aa21.61■■□□□ 1.05
HDAC6-225ENST00000483506 EVX2Q03828 476 aa21.61■■□□□ 1.05
HDAC6-225ENST00000483506 GPAT2Q6NUI2 795 aa21.61■■□□□ 1.05
HDAC6-225ENST00000483506 FASTKD5Q7L8L6 764 aaKnown RBP21.61■■□□□ 1.05
HDAC6-225ENST00000483506 CCDC84Q86UT8 332 aaPredicted RBP21.61■■□□□ 1.05
HDAC6-225ENST00000483506 ZNF296Q8WUU4 475 aaPredicted RBP21.61■■□□□ 1.05
HDAC6-225ENST00000483506 SWAP70Q9UH65 585 aa21.61■■□□□ 1.05
HDAC6-225ENST00000483506 USP17L12C9JPN9 530 aa21.6■■□□□ 1.05
HDAC6-225ENST00000483506 USP17L21D6R901 530 aa21.6■■□□□ 1.05
HDAC6-225ENST00000483506 GDF11O95390 407 aa21.6■■□□□ 1.05
HDAC6-225ENST00000483506 PDE4AP27815 886 aa21.6■■□□□ 1.05
HDAC6-225ENST00000483506 TAF1CQ15572 869 aaPredicted RBP21.6■■□□□ 1.05
HDAC6-225ENST00000483506 SHROOM1Q2M3G4 852 aaPredicted RBP21.6■■□□□ 1.05
HDAC6-225ENST00000483506 SBK1Q52WX2 424 aa21.6■■□□□ 1.05
HDAC6-225ENST00000483506 CTR9Q6PD62 1173 aa21.6■■□□□ 1.05
HDAC6-225ENST00000483506 TNS4Q8IZW8 715 aa21.6■■□□□ 1.05
HDAC6-225ENST00000483506 SEC62Q99442 399 aaKnown RBP21.6■■□□□ 1.05
HDAC6-225ENST00000483506 AS3MTQ9HBK9 375 aa21.6■■□□□ 1.05
HDAC6-225ENST00000483506 ZFYVE28Q9HCC9 887 aa21.6■■□□□ 1.05
HDAC6-225ENST00000483506 ARPP21Q9UBL0 812 aaPredicted RBP21.6■■□□□ 1.05
HDAC6-225ENST00000483506 SLC45A1Q9Y2W3 748 aa21.6■■□□□ 1.05
HDAC6-225ENST00000483506 MYH8P13535 1937 aa21.59■■□□□ 1.05
HDAC6-225ENST00000483506 TRIM75PA6NK02 468 aa21.59■■□□□ 1.05
HDAC6-225ENST00000483506 FKTNO75072 461 aa21.59■■□□□ 1.05
HDAC6-225ENST00000483506 CERKLQ49MI3 558 aaPredicted RBP21.59■■□□□ 1.05
HDAC6-225ENST00000483506 SH3D19Q5HYK7 790 aa21.59■■□□□ 1.05
HDAC6-225ENST00000483506 AMOTL1Q8IY63 956 aa21.59■■□□□ 1.05
HDAC6-225ENST00000483506 PROCA1Q8NCQ7 364 aaPredicted RBP21.59■■□□□ 1.05
HDAC6-225ENST00000483506 EPB41L4AQ9HCS5 686 aaPredicted RBP21.59■■□□□ 1.05
HDAC6-225ENST00000483506 GH2P01242 217 aa21.58■■□□□ 1.05
HDAC6-225ENST00000483506 SPP2Q13103 211 aa21.58■■□□□ 1.05
HDAC6-225ENST00000483506 C16orf86Q6ZW13 317 aa21.58■■□□□ 1.05
HDAC6-225ENST00000483506 HELLSQ9NRZ9 838 aa21.58■■□□□ 1.05
HDAC6-225ENST00000483506 ROBO3Q96MS0 1386 aa21.58■■□□□ 1.04
HDAC6-225ENST00000483506 ADGRA2Q96PE1 1338 aa21.57■■□□□ 1.04
HDAC6-225ENST00000483506 CYP2D7A0A087X1C5 515 aa21.57■■□□□ 1.04
HDAC6-225ENST00000483506 PATL2C9JE40 543 aaKnown RBP21.57■■□□□ 1.04
HDAC6-225ENST00000483506 PDHXO00330 501 aa21.57■■□□□ 1.04
HDAC6-225ENST00000483506 TLR2O60603 784 aa21.57■■□□□ 1.04
HDAC6-225ENST00000483506 ABCB5Q2M3G0 1257 aa21.57■■□□□ 1.04
HDAC6-225ENST00000483506 TRIM6-TRIM34B2RNG4 842 aa21.56■■□□□ 1.04
HDAC6-225ENST00000483506 BACE1P56817 501 aa21.56■■□□□ 1.04
HDAC6-225ENST00000483506 SLC44A5Q8NCS7 719 aa21.56■■□□□ 1.04
HDAC6-225ENST00000483506 DYNLL2Q96FJ2 89 aa21.56■■□□□ 1.04
HDAC6-225ENST00000483506 AGTPBP1Q9UPW5 1226 aa21.56■■□□□ 1.04
HDAC6-225ENST00000483506 SMIM22K7EJ46 135 aa21.55■■□□□ 1.04
HDAC6-225ENST00000483506 FOXP2O15409 715 aa21.55■■□□□ 1.04
HDAC6-225ENST00000483506 GUCY1A2P33402 732 aa21.55■■□□□ 1.04
HDAC6-225ENST00000483506 GADL1Q6ZQY3 521 aa21.55■■□□□ 1.04
HDAC6-225ENST00000483506 CTU1Q7Z7A3 348 aaKnown RBP21.55■■□□□ 1.04
HDAC6-225ENST00000483506 PARK7Q99497 189 aaKnown RBP21.55■■□□□ 1.04
HDAC6-225ENST00000483506 CABP5Q9NP86 173 aa21.55■■□□□ 1.04
HDAC6-225ENST00000483506 A0A0D9SFI3 127 aa21.54■■□□□ 1.04
HDAC6-225ENST00000483506 C19orf81C9J6K1 198 aa21.54■■□□□ 1.04
HDAC6-225ENST00000483506 CDK8P49336 464 aa21.54■■□□□ 1.04
HDAC6-225ENST00000483506 HMGCS2P54868 508 aa21.54■■□□□ 1.04
HDAC6-225ENST00000483506 MTMR2Q13614 643 aa21.54■■□□□ 1.04
HDAC6-225ENST00000483506 IFNL3Q8IZI9 196 aa21.54■■□□□ 1.04
HDAC6-225ENST00000483506 RILPL2Q969X0 211 aa21.54■■□□□ 1.04
HDAC6-225ENST00000483506 CCDC17Q96LX7 622 aa21.54■■□□□ 1.04
HDAC6-225ENST00000483506 NACAP1Q9BZK3 213 aa21.54■■□□□ 1.04
HDAC6-225ENST00000483506 GREB1LQ9C091 1923 aaPredicted RBP21.53■■□□□ 1.04
HDAC6-225ENST00000483506 USP17L10C9JJH3 530 aa21.53■■□□□ 1.04
HDAC6-225ENST00000483506 SP3Q02447 781 aa21.53■■□□□ 1.04
HDAC6-225ENST00000483506 MCMDC2Q4G0Z9 681 aa21.53■■□□□ 1.04
HDAC6-225ENST00000483506 TREML2Q5T2D2 321 aa21.53■■□□□ 1.04
HDAC6-225ENST00000483506 TTC22Q5TAA0 569 aa21.53■■□□□ 1.04
HDAC6-225ENST00000483506 C17orf99Q6UX52 265 aa21.53■■□□□ 1.04
HDAC6-225ENST00000483506 FAM227BQ96M60 508 aa21.53■■□□□ 1.04
HDAC6-225ENST00000483506 SDSP20132 328 aa21.52■■□□□ 1.04
HDAC6-225ENST00000483506 TDO2P48775 406 aa21.52■■□□□ 1.04
HDAC6-225ENST00000483506 CCDC129Q6ZRS4 1044 aa21.52■■□□□ 1.04
HDAC6-225ENST00000483506 TMEM179Q6ZVK1 233 aa21.52■■□□□ 1.04
HDAC6-225ENST00000483506 ERO1AQ96HE7 468 aa21.52■■□□□ 1.04
HDAC6-225ENST00000483506 C12orf42Q96LP6 360 aa21.52■■□□□ 1.04
HDAC6-225ENST00000483506 MCOLN1Q9GZU1 580 aa21.52■■□□□ 1.04
HDAC6-225ENST00000483506 APPP05067 770 aa21.51■■□□□ 1.03
HDAC6-225ENST00000483506 GSPT1P15170 499 aaKnown RBP21.51■■□□□ 1.03
HDAC6-225ENST00000483506 NMIQ13287 307 aaPredicted RBP21.51■■□□□ 1.03
HDAC6-225ENST00000483506 DGKZQ13574 1117 aa21.51■■□□□ 1.03
HDAC6-225ENST00000483506 RAB3GAP1Q15042 981 aa21.51■■□□□ 1.03
HDAC6-225ENST00000483506 KIAA1683Q9H0B3 1180 aa21.51■■□□□ 1.03
HDAC6-225ENST00000483506 HIP1O00291 1037 aa21.5■■□□□ 1.03
HDAC6-225ENST00000483506 CYP2C8P10632 490 aa21.5■■□□□ 1.03
HDAC6-225ENST00000483506 BCRP11274 1271 aa21.5■■□□□ 1.03
HDAC6-225ENST00000483506 AKR1B1P15121 316 aa21.5■■□□□ 1.03
HDAC6-225ENST00000483506 HOXA7P31268 230 aaPredicted RBP21.5■■□□□ 1.03
HDAC6-225ENST00000483506 PABPC4Q13310 644 aaKnown RBP eCLIP21.5■■□□□ 1.03
HDAC6-225ENST00000483506 SEPT2Q15019 361 aa21.5■■□□□ 1.03
HDAC6-225ENST00000483506 ALX1Q15699 326 aa21.5■■□□□ 1.03
HDAC6-225ENST00000483506 PKN2Q16513 984 aaKnown RBP21.5■■□□□ 1.03
HDAC6-225ENST00000483506 USP17L2Q6R6M4 530 aa21.5■■□□□ 1.03
HDAC6-225ENST00000483506 CENPQQ7L2Z9 268 aaPredicted RBP21.5■■□□□ 1.03
HDAC6-225ENST00000483506 NAPBQ9H115 298 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms