RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 GNAT2P19087 354 aa16.06■□□□□ 0.16
SSR1-208ENST00000483409 SHMT1P34896 483 aa16.06■□□□□ 0.16
SSR1-208ENST00000483409 GABPAQ06546 454 aa16.06■□□□□ 0.16
SSR1-208ENST00000483409 C12orf60Q5U649 245 aa16.06■□□□□ 0.16
SSR1-208ENST00000483409 TATDN1Q6P1N9 297 aa16.06■□□□□ 0.16
SSR1-208ENST00000483409 AMOTL1Q8IY63 956 aa16.06■□□□□ 0.16
SSR1-208ENST00000483409 DYNLL2Q96FJ2 89 aa16.06■□□□□ 0.16
SSR1-208ENST00000483409 EPB41L4AQ9HCS5 686 aaPredicted RBP16.06■□□□□ 0.16
SSR1-208ENST00000483409 ZBTB21Q9ULJ3 1066 aa16.06■□□□□ 0.16
SSR1-208ENST00000483409 A0A0D9SFI3 127 aa16.05■□□□□ 0.16
SSR1-208ENST00000483409 USP17L5A8MUK1 530 aa16.05■□□□□ 0.16
SSR1-208ENST00000483409 BTBD19C9JJ37 291 aa16.05■□□□□ 0.16
SSR1-208ENST00000483409 CXCL11O14625 94 aa16.05■□□□□ 0.16
SSR1-208ENST00000483409 GH2P01242 217 aa16.05■□□□□ 0.16
SSR1-208ENST00000483409 ASNSP08243 561 aa16.05■□□□□ 0.16
SSR1-208ENST00000483409 CERKLQ49MI3 558 aaPredicted RBP16.05■□□□□ 0.16
SSR1-208ENST00000483409 CTR9Q6PD62 1173 aa16.05■□□□□ 0.16
SSR1-208ENST00000483409 GADL1Q6ZQY3 521 aa16.05■□□□□ 0.16
SSR1-208ENST00000483409 FAM227BQ96M60 508 aa16.05■□□□□ 0.16
SSR1-208ENST00000483409 A0A0G2JLL6 359 aaPredicted RBP16.04■□□□□ 0.16
SSR1-208ENST00000483409 TDO2P48775 406 aa16.04■□□□□ 0.16
SSR1-208ENST00000483409 SPP2Q13103 211 aa16.04■□□□□ 0.16
SSR1-208ENST00000483409 NMIQ13287 307 aaPredicted RBP16.04■□□□□ 0.16
SSR1-208ENST00000483409 CRHR2Q13324 411 aa16.04■□□□□ 0.16
SSR1-208ENST00000483409 MOGSQ13724 837 aa16.04■□□□□ 0.16
SSR1-208ENST00000483409 TAF1CQ15572 869 aaPredicted RBP16.04■□□□□ 0.16
SSR1-208ENST00000483409 TTC22Q5TAA0 569 aa16.04■□□□□ 0.16
SSR1-208ENST00000483409 GIMAP6Q6P9H5 292 aa16.04■□□□□ 0.16
SSR1-208ENST00000483409 CENPQQ7L2Z9 268 aaPredicted RBP16.04■□□□□ 0.16
SSR1-208ENST00000483409 PRRT2Q7Z6L0 340 aaPredicted RBP16.04■□□□□ 0.16
SSR1-208ENST00000483409 ZNF280CQ8ND82 737 aa16.04■□□□□ 0.16
SSR1-208ENST00000483409 CFHR5Q9BXR6 569 aa16.04■□□□□ 0.16
SSR1-208ENST00000483409 ARPP21Q9UBL0 812 aaPredicted RBP16.04■□□□□ 0.16
SSR1-208ENST00000483409 MINDY4BA8MYZ0 360 aa16.03■□□□□ 0.16
SSR1-208ENST00000483409 PATL2C9JE40 543 aaKnown RBP16.03■□□□□ 0.16
SSR1-208ENST00000483409 GSPT1P15170 499 aaKnown RBP16.03■□□□□ 0.16
SSR1-208ENST00000483409 SDSP20132 328 aa16.03■□□□□ 0.16
SSR1-208ENST00000483409 RAB3GAP1Q15042 981 aa16.03■□□□□ 0.16
SSR1-208ENST00000483409 ABCB5Q2M3G0 1257 aa16.03■□□□□ 0.16
SSR1-208ENST00000483409 IFNL3Q8IZI9 196 aa16.03■□□□□ 0.16
SSR1-208ENST00000483409 STK11IPQ8N1F8 1099 aa16.03■□□□□ 0.16
SSR1-208ENST00000483409 TBC1D2Q9BYX2 928 aa16.03■□□□□ 0.16
SSR1-208ENST00000483409 AS3MTQ9HBK9 375 aa16.03■□□□□ 0.16
SSR1-208ENST00000483409 HELLSQ9NRZ9 838 aa16.03■□□□□ 0.16
SSR1-208ENST00000483409 GINM1Q9NU53 330 aa16.03■□□□□ 0.16
SSR1-208ENST00000483409 SWAP70Q9UH65 585 aa16.03■□□□□ 0.16
SSR1-208ENST00000483409 GPR25O00155 361 aa16.02■□□□□ 0.16
SSR1-208ENST00000483409 MPHOSPH10O00566 681 aaKnown RBP16.02■□□□□ 0.16
SSR1-208ENST00000483409 CDK8P49336 464 aa16.02■□□□□ 0.16
SSR1-208ENST00000483409 DGKZQ13574 1117 aa16.02■□□□□ 0.16
SSR1-208ENST00000483409 MCMDC2Q4G0Z9 681 aa16.02■□□□□ 0.16
SSR1-208ENST00000483409 GPAT2Q6NUI2 795 aa16.02■□□□□ 0.16
SSR1-208ENST00000483409 FASTKD5Q7L8L6 764 aaKnown RBP16.02■□□□□ 0.16
SSR1-208ENST00000483409 ANKRD23Q86SG2 305 aa16.02■□□□□ 0.16
SSR1-208ENST00000483409 TICAM2Q86XR7 235 aa16.02■□□□□ 0.16
SSR1-208ENST00000483409 ZNF296Q8WUU4 475 aaPredicted RBP16.02■□□□□ 0.16
SSR1-208ENST00000483409 CCDC136Q96JN2 1154 aa16.02■□□□□ 0.16
SSR1-208ENST00000483409 NACAP1Q9BZK3 213 aa16.02■□□□□ 0.16
SSR1-208ENST00000483409 ZFYVE28Q9HCC9 887 aa16.02■□□□□ 0.16
SSR1-208ENST00000483409 PDHXO00330 501 aa16.01■□□□□ 0.15
SSR1-208ENST00000483409 FOXP2O15409 715 aa16.01■□□□□ 0.15
SSR1-208ENST00000483409 HMGCS2P54868 508 aa16.01■□□□□ 0.15
SSR1-208ENST00000483409 MTMR2Q13614 643 aa16.01■□□□□ 0.15
SSR1-208ENST00000483409 SBK1Q52WX2 424 aa16.01■□□□□ 0.15
SSR1-208ENST00000483409 VPS53Q5VIR6 699 aa16.01■□□□□ 0.15
SSR1-208ENST00000483409 C16orf86Q6ZW13 317 aa16.01■□□□□ 0.15
SSR1-208ENST00000483409 ZNF589Q86UQ0 364 aaPredicted RBP16.01■□□□□ 0.15
SSR1-208ENST00000483409 SKAP1Q86WV1 359 aa16.01■□□□□ 0.15
SSR1-208ENST00000483409 WDR18Q9BV38 432 aa16.01■□□□□ 0.15
SSR1-208ENST00000483409 NAPBQ9H115 298 aa16.01■□□□□ 0.15
SSR1-208ENST00000483409 ZCCHC17Q9NP64 241 aaKnown RBP16.01■□□□□ 0.15
SSR1-208ENST00000483409 CABP5Q9NP86 173 aa16.01■□□□□ 0.15
SSR1-208ENST00000483409 DIAPH3Q9NSV4 1193 aa16.01■□□□□ 0.15
SSR1-208ENST00000483409 GREB1LQ9C091 1923 aaPredicted RBP16■□□□□ 0.15
SSR1-208ENST00000483409 AKR1B1P15121 316 aa16■□□□□ 0.15
SSR1-208ENST00000483409 GUCY1A2P33402 732 aa16■□□□□ 0.15
SSR1-208ENST00000483409 CWC27Q6UX04 472 aaKnown RBP16■□□□□ 0.15
SSR1-208ENST00000483409 TAOK2Q9UL54 1235 aa16■□□□□ 0.15
SSR1-208ENST00000483409 ZSWIM8A7E2V4 1837 aa16■□□□□ 0.15
SSR1-208ENST00000483409 ROBO3Q96MS0 1386 aa16■□□□□ 0.15
SSR1-208ENST00000483409 CCDC171Q6TFL3 1326 aa15.99■□□□□ 0.15
SSR1-208ENST00000483409 FKTNO75072 461 aa15.99■□□□□ 0.15
SSR1-208ENST00000483409 BACE1P56817 501 aa15.99■□□□□ 0.15
SSR1-208ENST00000483409 SEPT2Q15019 361 aa15.99■□□□□ 0.15
SSR1-208ENST00000483409 NOM1Q5C9Z4 860 aaKnown RBP15.99■□□□□ 0.15
SSR1-208ENST00000483409 TREML2Q5T2D2 321 aa15.99■□□□□ 0.15
SSR1-208ENST00000483409 TNS4Q8IZW8 715 aa15.99■□□□□ 0.15
SSR1-208ENST00000483409 MYH4Q9Y623 1939 aa15.99■□□□□ 0.15
SSR1-208ENST00000483409 LAMA4Q16363 1823 aa15.98■□□□□ 0.15
SSR1-208ENST00000483409 USP17L10C9JJH3 530 aa15.98■□□□□ 0.15
SSR1-208ENST00000483409 HIP1O00291 1037 aa15.98■□□□□ 0.15
SSR1-208ENST00000483409 CYP2C8P10632 490 aa15.98■□□□□ 0.15
SSR1-208ENST00000483409 ZYXQ15942 572 aaKnown RBP15.98■□□□□ 0.15
SSR1-208ENST00000483409 SH3D19Q5HYK7 790 aa15.98■□□□□ 0.15
SSR1-208ENST00000483409 TMEM179Q6ZVK1 233 aa15.98■□□□□ 0.15
SSR1-208ENST00000483409 CLEC10AQ8IUN9 316 aa15.98■□□□□ 0.15
SSR1-208ENST00000483409 PROCA1Q8NCQ7 364 aaPredicted RBP15.98■□□□□ 0.15
SSR1-208ENST00000483409 ACER1Q8TDN7 264 aa15.98■□□□□ 0.15
SSR1-208ENST00000483409 PARK7Q99497 189 aaKnown RBP15.98■□□□□ 0.15
SSR1-208ENST00000483409 FEZ1Q99689 392 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms