RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 SCYL3Q8IZE3 742 aa21.17■□□□□ 0.98
CPNE1-224ENST00000483359 CNKSR2Q8WXI2 1034 aa21.17■□□□□ 0.98
CPNE1-224ENST00000483359 TAF6LQ9Y6J9 622 aa21.17■□□□□ 0.98
CPNE1-224ENST00000483359 CTNND1O60716 968 aaKnown RBP21.17■□□□□ 0.98
CPNE1-224ENST00000483359 ZNF157P51786 506 aaPredicted RBP21.17■□□□□ 0.98
CPNE1-224ENST00000483359 MKRN3Q13064 507 aaKnown RBP21.17■□□□□ 0.98
CPNE1-224ENST00000483359 RRP12Q5JTH9 1297 aaKnown RBP21.17■□□□□ 0.98
CPNE1-224ENST00000483359 GH2P01242 217 aa21.16■□□□□ 0.98
CPNE1-224ENST00000483359 AKR1B1P15121 316 aa21.16■□□□□ 0.98
CPNE1-224ENST00000483359 RGMBQ6NW40 437 aa21.16■□□□□ 0.98
CPNE1-224ENST00000483359 NEDD4P46934 1319 aa21.16■□□□□ 0.98
CPNE1-224ENST00000483359 SEC24BO95487 1268 aa21.16■□□□□ 0.98
CPNE1-224ENST00000483359 RASA1P20936 1047 aa21.16■□□□□ 0.98
CPNE1-224ENST00000483359 ABCB5Q2M3G0 1257 aa21.16■□□□□ 0.98
CPNE1-224ENST00000483359 CYP4F22Q6NT55 531 aa21.16■□□□□ 0.98
CPNE1-224ENST00000483359 SLC10A4Q96EP9 437 aa21.16■□□□□ 0.98
CPNE1-224ENST00000483359 PICK1Q9NRD5 415 aa21.16■□□□□ 0.98
CPNE1-224ENST00000483359 ZBTB21Q9ULJ3 1066 aa21.16■□□□□ 0.98
CPNE1-224ENST00000483359 CEP350Q5VT06 3117 aa21.15■□□□□ 0.98
CPNE1-224ENST00000483359 RAB3GAP1Q15042 981 aa21.15■□□□□ 0.98
CPNE1-224ENST00000483359 AKNAD1Q5T1N1 836 aa21.15■□□□□ 0.98
CPNE1-224ENST00000483359 MFSD6Q6ZSS7 791 aa21.15■□□□□ 0.98
CPNE1-224ENST00000483359 OTUD5Q96G74 571 aa21.15■□□□□ 0.98
CPNE1-224ENST00000483359 ZNF287Q9HBT7 754 aa21.15■□□□□ 0.98
CPNE1-224ENST00000483359 DEFB115Q30KQ5 88 aa21.14■□□□□ 0.98
CPNE1-224ENST00000483359 FAM47AQ5JRC9 791 aa21.14■□□□□ 0.98
CPNE1-224ENST00000483359 NOL9Q5SY16 702 aaKnown RBP21.14■□□□□ 0.98
CPNE1-224ENST00000483359 CREB3L3Q68CJ9 461 aa21.14■□□□□ 0.98
CPNE1-224ENST00000483359 STAG1Q8WVM7 1258 aa21.14■□□□□ 0.98
CPNE1-224ENST00000483359 OPTNQ96CV9 577 aa21.14■□□□□ 0.98
CPNE1-224ENST00000483359 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.14■□□□□ 0.98
CPNE1-224ENST00000483359 RASSF10A6NK89 507 aa21.14■□□□□ 0.97
CPNE1-224ENST00000483359 SLC27A2O14975 620 aa21.14■□□□□ 0.97
CPNE1-224ENST00000483359 NECTIN1Q15223 517 aa21.14■□□□□ 0.97
CPNE1-224ENST00000483359 CLEC10AQ8IUN9 316 aa21.14■□□□□ 0.97
CPNE1-224ENST00000483359 ZNF444Q8N0Y2 327 aaPredicted RBP21.14■□□□□ 0.97
CPNE1-224ENST00000483359 RANBP6O60518 1105 aaKnown RBP21.13■□□□□ 0.97
CPNE1-224ENST00000483359 ASNSP08243 561 aa21.13■□□□□ 0.97
CPNE1-224ENST00000483359 RASAL3Q86YV0 1011 aa21.13■□□□□ 0.97
CPNE1-224ENST00000483359 NKX2-3Q8TAU0 364 aa21.13■□□□□ 0.97
CPNE1-224ENST00000483359 CABP5Q9NP86 173 aa21.13■□□□□ 0.97
CPNE1-224ENST00000483359 PTPRAP18433 802 aa21.12■□□□□ 0.97
CPNE1-224ENST00000483359 RNF41Q9H4P4 317 aaPredicted RBP21.12■□□□□ 0.97
CPNE1-224ENST00000483359 TSPY2A6NKD2 308 aa21.12■□□□□ 0.97
CPNE1-224ENST00000483359 TSPY3P0CV98 308 aa21.12■□□□□ 0.97
CPNE1-224ENST00000483359 TSPY8P0CW00 308 aa21.12■□□□□ 0.97
CPNE1-224ENST00000483359 SEPT2Q15019 361 aa21.12■□□□□ 0.97
CPNE1-224ENST00000483359 TAOK2Q9UL54 1235 aa21.12■□□□□ 0.97
CPNE1-224ENST00000483359 ZHX2Q9Y6X8 837 aa21.12■□□□□ 0.97
CPNE1-224ENST00000483359 PCNTO95613 3336 aa21.11■□□□□ 0.97
CPNE1-224ENST00000483359 SPDYE5A6NIY4 337 aa21.11■□□□□ 0.97
CPNE1-224ENST00000483359 UNCXA6NJT0 531 aa21.11■□□□□ 0.97
CPNE1-224ENST00000483359 GJA5P36382 358 aa21.11■□□□□ 0.97
CPNE1-224ENST00000483359 TFAP4Q01664 338 aa21.11■□□□□ 0.97
CPNE1-224ENST00000483359 STOX1Q6ZVD7 989 aa21.11■□□□□ 0.97
CPNE1-224ENST00000483359 ERO1BQ86YB8 467 aa21.11■□□□□ 0.97
CPNE1-224ENST00000483359 WNK4Q96J92 1243 aa21.11■□□□□ 0.97
CPNE1-224ENST00000483359 HHIPL1Q96JK4 782 aa21.11■□□□□ 0.97
CPNE1-224ENST00000483359 B4E1Z4 1266 aa21.1■□□□□ 0.97
CPNE1-224ENST00000483359 E7EWF7 191 aa21.1■□□□□ 0.97
CPNE1-224ENST00000483359 FGRP09769 529 aa21.1■□□□□ 0.97
CPNE1-224ENST00000483359 GUCY1A2P33402 732 aa21.1■□□□□ 0.97
CPNE1-224ENST00000483359 RNF20Q5VTR2 975 aa21.1■□□□□ 0.97
CPNE1-224ENST00000483359 TMEM179Q6ZVK1 233 aa21.1■□□□□ 0.97
CPNE1-224ENST00000483359 CAPNS2Q96L46 248 aa21.1■□□□□ 0.97
CPNE1-224ENST00000483359 CCDC17Q96LX7 622 aa21.1■□□□□ 0.97
CPNE1-224ENST00000483359 USP26Q9BXU7 913 aa21.1■□□□□ 0.97
CPNE1-224ENST00000483359 PHIPQ8WWQ0 1821 aa21.1■□□□□ 0.97
CPNE1-224ENST00000483359 TRIM75PA6NK02 468 aa21.1■□□□□ 0.97
CPNE1-224ENST00000483359 ORC4O43929 436 aa21.1■□□□□ 0.97
CPNE1-224ENST00000483359 SLC10A3P09131 477 aa21.1■□□□□ 0.97
CPNE1-224ENST00000483359 FAM155AB1AL88 458 aaPredicted RBP21.09■□□□□ 0.97
CPNE1-224ENST00000483359 IRF6O14896 467 aa21.09■□□□□ 0.97
CPNE1-224ENST00000483359 KDM4AO75164 1064 aa21.09■□□□□ 0.97
CPNE1-224ENST00000483359 RASEFQ8IZ41 740 aa21.09■□□□□ 0.97
CPNE1-224ENST00000483359 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.09■□□□□ 0.97
CPNE1-224ENST00000483359 USP17L5A8MUK1 530 aa21.08■□□□□ 0.97
CPNE1-224ENST00000483359 NMT2O60551 498 aa21.08■□□□□ 0.97
CPNE1-224ENST00000483359 HSPA4P34932 840 aa21.08■□□□□ 0.97
CPNE1-224ENST00000483359 ATP2B2Q01814 1243 aa21.08■□□□□ 0.97
CPNE1-224ENST00000483359 PPATQ06203 517 aa21.08■□□□□ 0.97
CPNE1-224ENST00000483359 SPRYD7Q5W111 196 aa21.08■□□□□ 0.97
CPNE1-224ENST00000483359 GREB1LQ9C091 1923 aaPredicted RBP21.08■□□□□ 0.97
CPNE1-224ENST00000483359 AOC2O75106 756 aa21.08■□□□□ 0.96
CPNE1-224ENST00000483359 PCP11498 1178 aaKnown RBP21.08■□□□□ 0.96
CPNE1-224ENST00000483359 VEGFBP49765 207 aa21.08■□□□□ 0.96
CPNE1-224ENST00000483359 ICA1Q05084 483 aa21.08■□□□□ 0.96
CPNE1-224ENST00000483359 TRDNQ13061 729 aa21.08■□□□□ 0.96
CPNE1-224ENST00000483359 RALYLQ86SE5 291 aaKnown RBP21.08■□□□□ 0.96
CPNE1-224ENST00000483359 ESR2Q92731 530 aa21.08■□□□□ 0.96
CPNE1-224ENST00000483359 CCDC102AQ96A19 550 aa21.08■□□□□ 0.96
CPNE1-224ENST00000483359 ZKSCAN3Q9BRR0 538 aa21.08■□□□□ 0.96
CPNE1-224ENST00000483359 ZKSCAN1P17029 563 aaPredicted RBP21.07■□□□□ 0.96
CPNE1-224ENST00000483359 SPP2Q13103 211 aa21.07■□□□□ 0.96
CPNE1-224ENST00000483359 ZIC5Q96T25 663 aa21.07■□□□□ 0.96
CPNE1-224ENST00000483359 KRT23Q9C075 422 aa21.07■□□□□ 0.96
CPNE1-224ENST00000483359 CNNM2Q9H8M5 875 aa21.07■□□□□ 0.96
CPNE1-224ENST00000483359 WDR33Q9C0J8 1336 aaKnown RBP21.07■□□□□ 0.96
CPNE1-224ENST00000483359 ECE1P42892 770 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 PPIL2Q13356 520 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms