RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 SH3D19Q5HYK7 790 aa17.05■□□□□ 0.32
VARS-226ENST00000483275 MIGA1Q8NAN2 632 aa17.05■□□□□ 0.32
VARS-226ENST00000483275 SSH3Q8TE77 659 aa17.05■□□□□ 0.32
VARS-226ENST00000483275 TRIB2Q92519 343 aa17.05■□□□□ 0.32
VARS-226ENST00000483275 P2RX7Q99572 595 aaKnown RBP17.05■□□□□ 0.32
VARS-226ENST00000483275 TRIM34Q9BYJ4 488 aa17.05■□□□□ 0.32
VARS-226ENST00000483275 CRISPLD2Q9H0B8 497 aa17.05■□□□□ 0.32
VARS-226ENST00000483275 CCDC8Q9H0W5 538 aaPredicted RBP17.05■□□□□ 0.32
VARS-226ENST00000483275 AS3MTQ9HBK9 375 aa17.05■□□□□ 0.32
VARS-226ENST00000483275 GJD2Q9UKL4 321 aa17.05■□□□□ 0.32
VARS-226ENST00000483275 ZBTB21Q9ULJ3 1066 aa17.05■□□□□ 0.32
VARS-226ENST00000483275 DNAH12Q6ZR08 3092 aa17.05■□□□□ 0.32
VARS-226ENST00000483275 COL6A3P12111 3177 aa17.04■□□□□ 0.32
VARS-226ENST00000483275 BAG3O95817 575 aa17.04■□□□□ 0.32
VARS-226ENST00000483275 CYP2B6P20813 491 aa17.04■□□□□ 0.32
VARS-226ENST00000483275 BACE1P56817 501 aa17.04■□□□□ 0.32
VARS-226ENST00000483275 PABPC4Q13310 644 aaKnown RBP eCLIP17.04■□□□□ 0.32
VARS-226ENST00000483275 ZYXQ15942 572 aaKnown RBP17.04■□□□□ 0.32
VARS-226ENST00000483275 CCDC158Q5M9N0 1113 aa17.04■□□□□ 0.32
VARS-226ENST00000483275 ITPRIPQ8IWB1 547 aa17.04■□□□□ 0.32
VARS-226ENST00000483275 C7orf61Q8IZ16 206 aa17.04■□□□□ 0.32
VARS-226ENST00000483275 WDR18Q9BV38 432 aa17.04■□□□□ 0.32
VARS-226ENST00000483275 TMOD4Q9NZQ9 345 aa17.04■□□□□ 0.32
VARS-226ENST00000483275 SOX1O00570 391 aaPredicted RBP17.03■□□□□ 0.32
VARS-226ENST00000483275 IDH1O75874 414 aaKnown RBP17.03■□□□□ 0.32
VARS-226ENST00000483275 ASNSP08243 561 aa17.03■□□□□ 0.32
VARS-226ENST00000483275 PLCG2P16885 1265 aa17.03■□□□□ 0.32
VARS-226ENST00000483275 CYP7A1P22680 504 aa17.03■□□□□ 0.32
VARS-226ENST00000483275 PPP4CP60510 307 aa17.03■□□□□ 0.32
VARS-226ENST00000483275 HERVK_113P62684 666 aa17.03■□□□□ 0.32
VARS-226ENST00000483275 ATP8B2P98198 1209 aa17.03■□□□□ 0.32
VARS-226ENST00000483275 POTEEQ6S8J3 1075 aa17.03■□□□□ 0.32
VARS-226ENST00000483275 PAGR1Q9BTK6 254 aa17.03■□□□□ 0.32
VARS-226ENST00000483275 TBC1D2Q9BYX2 928 aa17.03■□□□□ 0.32
VARS-226ENST00000483275 DHX36Q9H2U1 1008 aaKnown RBP17.03■□□□□ 0.32
VARS-226ENST00000483275 GPR108Q9NPR9 543 aa17.03■□□□□ 0.32
VARS-226ENST00000483275 MORF4L1Q9UBU8 362 aa17.03■□□□□ 0.32
VARS-226ENST00000483275 STAP2Q9UGK3 403 aa17.03■□□□□ 0.32
VARS-226ENST00000483275 ZMYND8Q9ULU4 1186 aaPredicted RBP17.03■□□□□ 0.32
VARS-226ENST00000483275 GH2P01242 217 aa17.02■□□□□ 0.32
VARS-226ENST00000483275 FTSJ3Q8IY81 847 aaKnown RBP17.02■□□□□ 0.32
VARS-226ENST00000483275 EAF2Q96CJ1 260 aaPredicted RBP17.02■□□□□ 0.32
VARS-226ENST00000483275 PORCNQ9H237 461 aa17.02■□□□□ 0.32
VARS-226ENST00000483275 ANTXR1Q9H6X2 564 aa17.02■□□□□ 0.32
VARS-226ENST00000483275 PRKAR2AP13861 404 aaKnown RBP17.01■□□□□ 0.31
VARS-226ENST00000483275 NECAB2Q7Z6G3 386 aa17.01■□□□□ 0.31
VARS-226ENST00000483275 MAGEB6Q8N7X4 407 aa17.01■□□□□ 0.31
VARS-226ENST00000483275 LRCH3Q96II8 777 aa17.01■□□□□ 0.31
VARS-226ENST00000483275 EMILIN3Q9NT22 766 aa17.01■□□□□ 0.31
VARS-226ENST00000483275 USP17L10C9JJH3 530 aa17■□□□□ 0.31
VARS-226ENST00000483275 HLA-DOAP06340 250 aa17■□□□□ 0.31
VARS-226ENST00000483275 SYN1P17600 705 aa17■□□□□ 0.31
VARS-226ENST00000483275 MNX1P50219 401 aaPredicted RBP17■□□□□ 0.31
VARS-226ENST00000483275 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.31
VARS-226ENST00000483275 EVX2Q03828 476 aa17■□□□□ 0.31
VARS-226ENST00000483275 CCL14Q16627 93 aa17■□□□□ 0.31
VARS-226ENST00000483275 Q3C1V9 767 aa17■□□□□ 0.31
VARS-226ENST00000483275 METTL16Q86W50 562 aaKnown RBP17■□□□□ 0.31
VARS-226ENST00000483275 BCL11AQ9H165 835 aa17■□□□□ 0.31
VARS-226ENST00000483275 HMX1Q9NP08 348 aaPredicted RBP17■□□□□ 0.31
VARS-226ENST00000483275 RBPJLQ9UBG7 517 aa17■□□□□ 0.31
VARS-226ENST00000483275 EXOC6BQ9Y2D4 811 aa17■□□□□ 0.31
VARS-226ENST00000483275 MYH8P13535 1937 aa17■□□□□ 0.31
VARS-226ENST00000483275 RPTORQ8N122 1335 aa16.99■□□□□ 0.31
VARS-226ENST00000483275 HOXA7P31268 230 aaPredicted RBP16.99■□□□□ 0.31
VARS-226ENST00000483275 USP5P45974 858 aa16.99■□□□□ 0.31
VARS-226ENST00000483275 GPRC5AQ8NFJ5 357 aa16.99■□□□□ 0.31
VARS-226ENST00000483275 FEZ1Q99689 392 aa16.99■□□□□ 0.31
VARS-226ENST00000483275 ERVK-9P63128 1117 aa16.98■□□□□ 0.31
VARS-226ENST00000483275 ERVK-24P63145 666 aa16.98■□□□□ 0.31
VARS-226ENST00000483275 FOXP4Q8IVH2 680 aaPredicted RBP16.98■□□□□ 0.31
VARS-226ENST00000483275 ZNF512BQ96KM6 892 aaPredicted RBP16.98■□□□□ 0.31
VARS-226ENST00000483275 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
VARS-226ENST00000483275 LAMA2P24043 3122 aaKnown RBP16.98■□□□□ 0.31
VARS-226ENST00000483275 C19orf81C9J6K1 198 aa16.97■□□□□ 0.31
VARS-226ENST00000483275 ZKSCAN1P17029 563 aaPredicted RBP16.97■□□□□ 0.31
VARS-226ENST00000483275 CCND3P30281 292 aaPredicted RBP16.97■□□□□ 0.31
VARS-226ENST00000483275 RAB3GAP1Q15042 981 aa16.97■□□□□ 0.31
VARS-226ENST00000483275 MAP3K21Q5TCX8 1036 aa16.97■□□□□ 0.31
VARS-226ENST00000483275 CEP85Q6P2H3 762 aa16.97■□□□□ 0.31
VARS-226ENST00000483275 GPR142Q7Z601 462 aa16.97■□□□□ 0.31
VARS-226ENST00000483275 AACSQ86V21 672 aa16.97■□□□□ 0.31
VARS-226ENST00000483275 ACER1Q8TDN7 264 aa16.97■□□□□ 0.31
VARS-226ENST00000483275 PANK1Q8TE04 598 aa16.97■□□□□ 0.31
VARS-226ENST00000483275 NUDT12Q9BQG2 462 aa16.97■□□□□ 0.31
VARS-226ENST00000483275 NBPF3Q9H094 633 aa16.97■□□□□ 0.31
VARS-226ENST00000483275 BAZ2AQ9UIF9 1905 aaKnown RBP16.97■□□□□ 0.31
VARS-226ENST00000483275 PFASO15067 1338 aa16.96■□□□□ 0.31
VARS-226ENST00000483275 APBB1O00213 710 aa16.96■□□□□ 0.31
VARS-226ENST00000483275 CNMDO75829 334 aa16.96■□□□□ 0.31
VARS-226ENST00000483275 CACNB2Q08289 660 aaPredicted RBP16.96■□□□□ 0.31
VARS-226ENST00000483275 PDE3AQ14432 1141 aa16.96■□□□□ 0.31
VARS-226ENST00000483275 WDR78Q5VTH9 848 aa16.96■□□□□ 0.31
VARS-226ENST00000483275 USP17L2Q6R6M4 530 aa16.96■□□□□ 0.31
VARS-226ENST00000483275 SOCS4Q8WXH5 440 aa16.96■□□□□ 0.31
VARS-226ENST00000483275 C11orf49Q9H6J7 331 aa16.96■□□□□ 0.31
VARS-226ENST00000483275 IL1RAPL2Q9NP60 686 aa16.96■□□□□ 0.31
VARS-226ENST00000483275 A0A0C4DFX4 3053 aa16.95■□□□□ 0.3
VARS-226ENST00000483275 MAPK4P31152 587 aa16.95■□□□□ 0.3
VARS-226ENST00000483275 CCAR1Q8IX12 1150 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms