RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 VWA3AA6NCI4 1184 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 KLRK1P26718 216 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 CFAP100Q494V2 611 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 TICAM2Q86XR7 235 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 OXER1Q8TDS5 423 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.44■□□□□ 0.38
DDR1-244ENST00000482873 NUP98P52948 1817 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 TMEM232C9JQI7 657 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 NTSR2O95665 410 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 SERPINC1P01008 464 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 LONRF3Q496Y0 759 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 TEX35Q5T0J7 233 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 SMARCE1Q969G3 411 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 TMEM87BQ96K49 555 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 LRP6O75581 1613 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 ABCC12Q96J65 1359 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 SPEF2Q9C093 1822 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 CDKL5O76039 1030 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 CMA1P23946 247 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 WTAPQ15007 396 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 GRAMD1CQ8IYS0 662 aa17.44■□□□□ 0.38
DDR1-244ENST00000482873 FAM205CA6NFA0 338 aa17.43■□□□□ 0.38
DDR1-244ENST00000482873 RAD51AP2Q09MP3 1159 aa17.43■□□□□ 0.38
DDR1-244ENST00000482873 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
DDR1-244ENST00000482873 PTPAQ15257 358 aa17.43■□□□□ 0.38
DDR1-244ENST00000482873 TMEM139Q8IV31 216 aa17.43■□□□□ 0.38
DDR1-244ENST00000482873 DIS3L2Q8IYB7 885 aaKnown RBP17.43■□□□□ 0.38
DDR1-244ENST00000482873 COL4A1P02462 1669 aa17.43■□□□□ 0.38
DDR1-244ENST00000482873 CC2D1AQ6P1N0 951 aaPredicted RBP17.43■□□□□ 0.38
DDR1-244ENST00000482873 VSTM4Q8IW00 320 aa17.43■□□□□ 0.38
DDR1-244ENST00000482873 WDR24Q96S15 920 aa17.43■□□□□ 0.38
DDR1-244ENST00000482873 OAS2P29728 719 aaKnown RBP17.42■□□□□ 0.38
DDR1-244ENST00000482873 ZNF827Q17R98 1081 aa17.42■□□□□ 0.38
DDR1-244ENST00000482873 CCDC34Q96HJ3 373 aa17.42■□□□□ 0.38
DDR1-244ENST00000482873 MAP3K14Q99558 947 aa17.42■□□□□ 0.38
DDR1-244ENST00000482873 TFCP2L1Q9NZI6 479 aa17.42■□□□□ 0.38
DDR1-244ENST00000482873 TUBE1Q9UJT0 475 aa17.42■□□□□ 0.38
DDR1-244ENST00000482873 MYL5Q02045 173 aa17.42■□□□□ 0.38
DDR1-244ENST00000482873 RTN1Q16799 776 aa17.42■□□□□ 0.38
DDR1-244ENST00000482873 FOXP4Q8IVH2 680 aaPredicted RBP17.42■□□□□ 0.38
DDR1-244ENST00000482873 CELF1Q92879 486 aaKnown RBP17.42■□□□□ 0.38
DDR1-244ENST00000482873 NACAP1Q9BZK3 213 aa17.42■□□□□ 0.38
DDR1-244ENST00000482873 RNF216Q9NWF9 866 aaPredicted RBP17.42■□□□□ 0.38
DDR1-244ENST00000482873 PPP2R2CQ9Y2T4 447 aa17.42■□□□□ 0.38
DDR1-244ENST00000482873 TOP1P11387 765 aaKnown RBP17.41■□□□□ 0.38
DDR1-244ENST00000482873 TOB1P50616 345 aaPredicted RBP17.41■□□□□ 0.38
DDR1-244ENST00000482873 PPARAQ07869 468 aa17.41■□□□□ 0.38
DDR1-244ENST00000482873 PCDHB6Q9Y5E3 794 aa17.41■□□□□ 0.38
DDR1-244ENST00000482873 ERICH2A1L162 156 aa17.41■□□□□ 0.38
DDR1-244ENST00000482873 ATP8B1O43520 1251 aa17.41■□□□□ 0.38
DDR1-244ENST00000482873 SMC1AQ14683 1233 aaKnown RBP17.41■□□□□ 0.38
DDR1-244ENST00000482873 USP49Q70CQ1 688 aa17.41■□□□□ 0.38
DDR1-244ENST00000482873 SGMS1Q86VZ5 419 aa17.41■□□□□ 0.38
DDR1-244ENST00000482873 MYH7P12883 1935 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 FAM98CQ17RN3 349 aaKnown RBP17.4■□□□□ 0.38
DDR1-244ENST00000482873 CNNM3Q8NE01 707 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 UBAC1Q9BSL1 405 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 CABP5Q9NP86 173 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 INTS13Q9NVM9 706 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 FANCLQ9NW38 375 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 VPS54Q9P1Q0 977 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 BAZ2BQ9UIF8 2168 aaKnown RBP17.4■□□□□ 0.38
DDR1-244ENST00000482873 ARHGAP6O43182 974 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 ZSCAN12O43309 604 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 CBFA2T2O43439 604 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 NMT2O60551 498 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 TPM1P09493 284 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 MAP3K9P80192 1104 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 SPATA31A1Q5TZJ5 1347 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 WDR19Q8NEZ3 1342 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 ATRNO75882 1429 aa17.4■□□□□ 0.38
DDR1-244ENST00000482873 GNG11P61952 73 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 NOM1Q5C9Z4 860 aaKnown RBP17.39■□□□□ 0.37
DDR1-244ENST00000482873 METTL16Q86W50 562 aaKnown RBP17.39■□□□□ 0.37
DDR1-244ENST00000482873 NOSTRINQ8IVI9 506 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 ZNF654Q8IZM8 581 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 TXLNBQ8N3L3 684 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 GPR161Q8N6U8 529 aaKnown RBP17.39■□□□□ 0.37
DDR1-244ENST00000482873 KRT23Q9C075 422 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 SRP68Q9UHB9 627 aaKnown RBP17.39■□□□□ 0.37
DDR1-244ENST00000482873 FEZ2Q9UHY8 353 aaPredicted RBP17.39■□□□□ 0.37
DDR1-244ENST00000482873 KCNH3Q9ULD8 1083 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 TAF1P21675 1872 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 MAGEB6P1A0A0J9YX57 407 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 FMNL1O95466 1100 aaPredicted RBP17.39■□□□□ 0.37
DDR1-244ENST00000482873 LIFRP42702 1097 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 GYS2P54840 703 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 KRBA2Q6ZNG9 492 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 FCHSD1Q86WN1 690 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 HPSEQ9Y251 543 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 PCDHA5Q9Y5H7 936 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 TNKSO95271 1327 aa17.39■□□□□ 0.37
DDR1-244ENST00000482873 CASP1P29466 404 aa17.38■□□□□ 0.37
DDR1-244ENST00000482873 PPP2R3AQ06190 1150 aa17.38■□□□□ 0.37
DDR1-244ENST00000482873 PDE4BQ07343 736 aa17.38■□□□□ 0.37
DDR1-244ENST00000482873 ALX1Q15699 326 aa17.38■□□□□ 0.37
DDR1-244ENST00000482873 ANKRD18AQ8IVF6 992 aa17.38■□□□□ 0.37
DDR1-244ENST00000482873 FANCBQ8NB91 859 aa17.38■□□□□ 0.37
DDR1-244ENST00000482873 LINC00116Q8NCU8 138 aa17.38■□□□□ 0.37
DDR1-244ENST00000482873 SHISA4Q96DD7 197 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms