RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 ECM2O94769 699 aaPredicted RBP12.08□□□□□ -0.47
HLA-DQA1-206ENST00000482745 GDF11O95390 407 aa12.08□□□□□ -0.47
HLA-DQA1-206ENST00000482745 CAP1Q01518 475 aa12.08□□□□□ -0.47
HLA-DQA1-206ENST00000482745 SLFNL1Q499Z3 407 aa12.08□□□□□ -0.47
HLA-DQA1-206ENST00000482745 FOXP4Q8IVH2 680 aaPredicted RBP12.08□□□□□ -0.47
HLA-DQA1-206ENST00000482745 PARK7Q99497 189 aaKnown RBP12.08□□□□□ -0.47
HLA-DQA1-206ENST00000482745 CRNKL1Q9BZJ0 848 aaKnown RBP12.08□□□□□ -0.47
HLA-DQA1-206ENST00000482745 CPA4Q9UI42 421 aa12.08□□□□□ -0.47
HLA-DQA1-206ENST00000482745 HTTP42858 3142 aa12.08□□□□□ -0.48
HLA-DQA1-206ENST00000482745 CYP2C8P10632 490 aa12.08□□□□□ -0.48
HLA-DQA1-206ENST00000482745 SOX10P56693 466 aa12.08□□□□□ -0.48
HLA-DQA1-206ENST00000482745 GPAT2Q6NUI2 795 aa12.08□□□□□ -0.48
HLA-DQA1-206ENST00000482745 LCORLQ8N3X6 602 aa12.08□□□□□ -0.48
HLA-DQA1-206ENST00000482745 LOC285556D6RIA3 1793 aa12.08□□□□□ -0.48
HLA-DQA1-206ENST00000482745 USP17L5A8MUK1 530 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 ADD2P35612 726 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 SPP2Q13103 211 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 KIF22Q14807 665 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 SHROOM1Q2M3G4 852 aaPredicted RBP12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 METTL16Q86W50 562 aaKnown RBP12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 ZNF280CQ8ND82 737 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 SDR42E1Q8WUS8 393 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 ARMT1Q9H993 441 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 MBD4O95243 580 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 CHGBP05060 677 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 POLR3DP05423 398 aaPredicted RBP12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 ASNSP08243 561 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 HMGCS2P54868 508 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 TTC6Q86TZ1 520 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 ARHGAP39Q9C0H5 1083 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 AS3MTQ9HBK9 375 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 SERPINB13Q9UIV8 391 aa12.07□□□□□ -0.48
HLA-DQA1-206ENST00000482745 BAZ2AQ9UIF9 1905 aaKnown RBP12.06□□□□□ -0.48
HLA-DQA1-206ENST00000482745 ADGRA2Q96PE1 1338 aa12.06□□□□□ -0.48
HLA-DQA1-206ENST00000482745 XRCC6P12956 609 aaKnown RBP eCLIP12.06□□□□□ -0.48
HLA-DQA1-206ENST00000482745 JAG1P78504 1218 aa12.06□□□□□ -0.48
HLA-DQA1-206ENST00000482745 LACTBP83111 547 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQA1-206ENST00000482745 ARHGEF6Q15052 776 aa12.06□□□□□ -0.48
HLA-DQA1-206ENST00000482745 C17orf99Q6UX52 265 aa12.06□□□□□ -0.48
HLA-DQA1-206ENST00000482745 TBC1D2Q9BYX2 928 aa12.06□□□□□ -0.48
HLA-DQA1-206ENST00000482745 MCM9Q9NXL9 1143 aa12.06□□□□□ -0.48
HLA-DQA1-206ENST00000482745 ZBTB21Q9ULJ3 1066 aa12.06□□□□□ -0.48
HLA-DQA1-206ENST00000482745 AGTPBP1Q9UPW5 1226 aa12.06□□□□□ -0.48
HLA-DQA1-206ENST00000482745 PTPN22Q9Y2R2 807 aa12.06□□□□□ -0.48
HLA-DQA1-206ENST00000482745 TREML2Q5T2D2 321 aa12.05□□□□□ -0.48
HLA-DQA1-206ENST00000482745 EHD4Q9H223 541 aa12.05□□□□□ -0.48
HLA-DQA1-206ENST00000482745 CENPFP49454 3210 aa12.05□□□□□ -0.48
HLA-DQA1-206ENST00000482745 MYH8P13535 1937 aa12.05□□□□□ -0.48
HLA-DQA1-206ENST00000482745 PLCD1P51178 756 aa12.05□□□□□ -0.48
HLA-DQA1-206ENST00000482745 MTMR2Q13614 643 aa12.05□□□□□ -0.48
HLA-DQA1-206ENST00000482745 ZSCAN25Q6NSZ9 544 aa12.05□□□□□ -0.48
HLA-DQA1-206ENST00000482745 PROCA1Q8NCQ7 364 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQA1-206ENST00000482745 OTUD7AQ8TE49 926 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQA1-206ENST00000482745 SMCR8Q8TEV9 937 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQA1-206ENST00000482745 DCP1AQ9NPI6 582 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQA1-206ENST00000482745 ISY1Q9ULR0 285 aaKnown RBP12.05□□□□□ -0.48
HLA-DQA1-206ENST00000482745 PRKAB2O43741 272 aa12.04□□□□□ -0.48
HLA-DQA1-206ENST00000482745 GH2P01242 217 aa12.04□□□□□ -0.48
HLA-DQA1-206ENST00000482745 EVX2Q03828 476 aa12.04□□□□□ -0.48
HLA-DQA1-206ENST00000482745 UBE3CQ15386 1083 aa12.04□□□□□ -0.48
HLA-DQA1-206ENST00000482745 SLC45A1Q9Y2W3 748 aa12.04□□□□□ -0.48
HLA-DQA1-206ENST00000482745 MGAMO43451 1857 aa12.04□□□□□ -0.48
HLA-DQA1-206ENST00000482745 CERKLQ49MI3 558 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQA1-206ENST00000482745 TATDN1Q6P1N9 297 aa12.04□□□□□ -0.48
HLA-DQA1-206ENST00000482745 KBTBD3Q8NAB2 608 aa12.04□□□□□ -0.48
HLA-DQA1-206ENST00000482745 WDR18Q9BV38 432 aa12.04□□□□□ -0.48
HLA-DQA1-206ENST00000482745 GINM1Q9NU53 330 aa12.04□□□□□ -0.48
HLA-DQA1-206ENST00000482745 PNMA3Q9UL41 463 aa12.04□□□□□ -0.48
HLA-DQA1-206ENST00000482745 PTCH2Q9Y6C5 1203 aa12.04□□□□□ -0.48
HLA-DQA1-206ENST00000482745 TTC41PQ6P2S7 1318 aa12.03□□□□□ -0.48
HLA-DQA1-206ENST00000482745 ERC2O15083 957 aa12.03□□□□□ -0.48
HLA-DQA1-206ENST00000482745 FMNL1O95466 1100 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQA1-206ENST00000482745 CYP2D6P10635 497 aa12.03□□□□□ -0.48
HLA-DQA1-206ENST00000482745 BCRP11274 1271 aa12.03□□□□□ -0.48
HLA-DQA1-206ENST00000482745 PSMC4P43686 418 aa12.03□□□□□ -0.48
HLA-DQA1-206ENST00000482745 MRE11P49959 708 aa12.03□□□□□ -0.48
HLA-DQA1-206ENST00000482745 RAB3GAP1Q15042 981 aa12.03□□□□□ -0.48
HLA-DQA1-206ENST00000482745 ANKRD45Q5TZF3 282 aa12.03□□□□□ -0.48
HLA-DQA1-206ENST00000482745 PUS7LQ9H0K6 701 aaKnown RBP12.03□□□□□ -0.48
HLA-DQA1-206ENST00000482745 SLKQ9H2G2 1235 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQA1-206ENST00000482745 TMOD4Q9NZQ9 345 aa12.03□□□□□ -0.48
HLA-DQA1-206ENST00000482745 SLC4A4Q9Y6R1 1079 aa12.03□□□□□ -0.48
HLA-DQA1-206ENST00000482745 MX1P20591 662 aa12.02□□□□□ -0.48
HLA-DQA1-206ENST00000482745 CTGFP29279 349 aa12.02□□□□□ -0.48
HLA-DQA1-206ENST00000482745 SHMT1P34896 483 aa12.02□□□□□ -0.48
HLA-DQA1-206ENST00000482745 BACE1P56817 501 aa12.02□□□□□ -0.48
HLA-DQA1-206ENST00000482745 MLLT1Q03111 559 aaPredicted RBP12.02□□□□□ -0.48
HLA-DQA1-206ENST00000482745 PABPC4Q13310 644 aaKnown RBP eCLIP12.02□□□□□ -0.48
HLA-DQA1-206ENST00000482745 ABCB5Q2M3G0 1257 aa12.02□□□□□ -0.48
HLA-DQA1-206ENST00000482745 SH3D19Q5HYK7 790 aa12.02□□□□□ -0.48
HLA-DQA1-206ENST00000482745 TRIM47Q96LD4 638 aa12.02□□□□□ -0.48
HLA-DQA1-206ENST00000482745 UPF2Q9HAU5 1272 aaKnown RBP12.02□□□□□ -0.48
HLA-DQA1-206ENST00000482745 ATP8A2Q9NTI2 1148 aa12.02□□□□□ -0.48
HLA-DQA1-206ENST00000482745 USP17L10C9JJH3 530 aa12.02□□□□□ -0.49
HLA-DQA1-206ENST00000482745 RGS19P49795 217 aa12.02□□□□□ -0.49
HLA-DQA1-206ENST00000482745 HDAC1Q13547 482 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQA1-206ENST00000482745 SLC9C1Q4G0N8 1177 aa12.02□□□□□ -0.49
HLA-DQA1-206ENST00000482745 ANKRD13CQ8N6S4 541 aa12.02□□□□□ -0.49
HLA-DQA1-206ENST00000482745 PI4K2BQ8TCG2 481 aa12.02□□□□□ -0.49
HLA-DQA1-206ENST00000482745 GCC1Q96CN9 775 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms