RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 MFSD6Q6ZSS7 791 aa23.61■■□□□ 1.37
TRAPPC12-220ENST00000482645 PICK1Q9NRD5 415 aa23.61■■□□□ 1.37
TRAPPC12-220ENST00000482645 ATAD5Q96QE3 1844 aa23.6■■□□□ 1.37
TRAPPC12-220ENST00000482645 GRM1Q13255 1194 aa23.6■■□□□ 1.37
TRAPPC12-220ENST00000482645 AKNAD1Q5T1N1 836 aa23.6■■□□□ 1.37
TRAPPC12-220ENST00000482645 CREB3L3Q68CJ9 461 aa23.6■■□□□ 1.37
TRAPPC12-220ENST00000482645 SCYL3Q8IZE3 742 aa23.6■■□□□ 1.37
TRAPPC12-220ENST00000482645 ZNF444Q8N0Y2 327 aaPredicted RBP23.6■■□□□ 1.37
TRAPPC12-220ENST00000482645 SLC10A4Q96EP9 437 aa23.6■■□□□ 1.37
TRAPPC12-220ENST00000482645 C22orf23Q9BZE7 217 aa23.6■■□□□ 1.37
TRAPPC12-220ENST00000482645 TACC3Q9Y6A5 838 aa23.6■■□□□ 1.37
TRAPPC12-220ENST00000482645 DOCK1Q14185 1865 aa23.6■■□□□ 1.37
TRAPPC12-220ENST00000482645 SLC27A2O14975 620 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 GH2P01242 217 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 AKR1B1P15121 316 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 HSPA6P17066 643 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 ZNF157P51786 506 aaPredicted RBP23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 ABCB5Q2M3G0 1257 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 STAG1Q8WVM7 1258 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 RNF41Q9H4P4 317 aaPredicted RBP23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 SNCAIPQ9Y6H5 919 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 TAF6LQ9Y6J9 622 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 RASA1P20936 1047 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 JAG1P78504 1218 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 RAB3GAP1Q15042 981 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 NECTIN1Q15223 517 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 CCDC84Q86UT8 332 aaPredicted RBP23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 CABP5Q9NP86 173 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 TAOK2Q9UL54 1235 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 ZBTB21Q9ULJ3 1066 aa23.59■■□□□ 1.37
TRAPPC12-220ENST00000482645 NEDD4P46934 1319 aa23.58■■□□□ 1.37
TRAPPC12-220ENST00000482645 RANBP6O60518 1105 aaKnown RBP23.58■■□□□ 1.36
TRAPPC12-220ENST00000482645 MCCP23508 829 aa23.58■■□□□ 1.36
TRAPPC12-220ENST00000482645 MKRN3Q13064 507 aaKnown RBP23.58■■□□□ 1.36
TRAPPC12-220ENST00000482645 FAM47AQ5JRC9 791 aa23.58■■□□□ 1.36
TRAPPC12-220ENST00000482645 NOL9Q5SY16 702 aaKnown RBP23.58■■□□□ 1.36
TRAPPC12-220ENST00000482645 RNF20Q5VTR2 975 aa23.58■■□□□ 1.36
TRAPPC12-220ENST00000482645 RGMBQ6NW40 437 aa23.58■■□□□ 1.36
TRAPPC12-220ENST00000482645 CNKSR2Q8WXI2 1034 aa23.58■■□□□ 1.36
TRAPPC12-220ENST00000482645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.58■■□□□ 1.36
TRAPPC12-220ENST00000482645 EPB41L2O43491 1005 aaKnown RBP23.57■■□□□ 1.36
TRAPPC12-220ENST00000482645 OTUD5Q96G74 571 aa23.57■■□□□ 1.36
TRAPPC12-220ENST00000482645 TBC1D32Q96NH3 1257 aa23.57■■□□□ 1.36
TRAPPC12-220ENST00000482645 TSPY2A6NKD2 308 aa23.56■■□□□ 1.36
TRAPPC12-220ENST00000482645 ASNSP08243 561 aa23.56■■□□□ 1.36
TRAPPC12-220ENST00000482645 TSPY3P0CV98 308 aa23.56■■□□□ 1.36
TRAPPC12-220ENST00000482645 TSPY8P0CW00 308 aa23.56■■□□□ 1.36
TRAPPC12-220ENST00000482645 OPTNQ96CV9 577 aa23.56■■□□□ 1.36
TRAPPC12-220ENST00000482645 CCDC17Q96LX7 622 aa23.56■■□□□ 1.36
TRAPPC12-220ENST00000482645 TSHZ2Q9NRE2 1034 aa23.56■■□□□ 1.36
TRAPPC12-220ENST00000482645 UNCXA6NJT0 531 aa23.55■■□□□ 1.36
TRAPPC12-220ENST00000482645 E7EWF7 191 aa23.55■■□□□ 1.36
TRAPPC12-220ENST00000482645 ORC4O43929 436 aa23.55■■□□□ 1.36
TRAPPC12-220ENST00000482645 PTPRAP18433 802 aa23.55■■□□□ 1.36
TRAPPC12-220ENST00000482645 TFAP4Q01664 338 aa23.55■■□□□ 1.36
TRAPPC12-220ENST00000482645 SEPT2Q15019 361 aa23.55■■□□□ 1.36
TRAPPC12-220ENST00000482645 DEFB115Q30KQ5 88 aa23.55■■□□□ 1.36
TRAPPC12-220ENST00000482645 CYP4F22Q6NT55 531 aa23.55■■□□□ 1.36
TRAPPC12-220ENST00000482645 B4E1Z4 1266 aa23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 PCP11498 1178 aaKnown RBP23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 ZKSCAN1P17029 563 aaPredicted RBP23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 TRDNQ13061 729 aa23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 STOX1Q6ZVD7 989 aa23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 TMEM179Q6ZVK1 233 aa23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 CLEC10AQ8IUN9 316 aa23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 ZHX2Q9Y6X8 837 aa23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 FGRP09769 529 aa23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 HSPA4P34932 840 aa23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 RALYLQ86SE5 291 aaKnown RBP23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 ERO1BQ86YB8 467 aa23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 RASAL3Q86YV0 1011 aa23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 ESR2Q92731 530 aa23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 CNNM2Q9H8M5 875 aa23.54■■□□□ 1.36
TRAPPC12-220ENST00000482645 SPDYE5A6NIY4 337 aa23.53■■□□□ 1.36
TRAPPC12-220ENST00000482645 RASSF10A6NK89 507 aa23.53■■□□□ 1.36
TRAPPC12-220ENST00000482645 USP17L5A8MUK1 530 aa23.53■■□□□ 1.36
TRAPPC12-220ENST00000482645 KDM4AO75164 1064 aa23.53■■□□□ 1.36
TRAPPC12-220ENST00000482645 RBM25P49756 843 aaKnown RBP23.53■■□□□ 1.36
TRAPPC12-220ENST00000482645 ATP2B2Q01814 1243 aa23.53■■□□□ 1.36
TRAPPC12-220ENST00000482645 RASEFQ8IZ41 740 aa23.53■■□□□ 1.36
TRAPPC12-220ENST00000482645 NKX2-3Q8TAU0 364 aa23.53■■□□□ 1.36
TRAPPC12-220ENST00000482645 HHIPL1Q96JK4 782 aa23.53■■□□□ 1.36
TRAPPC12-220ENST00000482645 KRT23Q9C075 422 aa23.53■■□□□ 1.36
TRAPPC12-220ENST00000482645 GUCY1A2P33402 732 aa23.52■■□□□ 1.36
TRAPPC12-220ENST00000482645 WNK4Q96J92 1243 aa23.52■■□□□ 1.36
TRAPPC12-220ENST00000482645 TRIM75PA6NK02 468 aa23.51■■□□□ 1.35
TRAPPC12-220ENST00000482645 GJA5P36382 358 aa23.51■■□□□ 1.35
TRAPPC12-220ENST00000482645 NCOA7Q8NI08 942 aa23.51■■□□□ 1.35
TRAPPC12-220ENST00000482645 GINM1Q9NU53 330 aa23.51■■□□□ 1.35
TRAPPC12-220ENST00000482645 IRF6O14896 467 aa23.5■■□□□ 1.35
TRAPPC12-220ENST00000482645 NMT2O60551 498 aa23.5■■□□□ 1.35
TRAPPC12-220ENST00000482645 SLC10A3P09131 477 aa23.5■■□□□ 1.35
TRAPPC12-220ENST00000482645 ICA1Q05084 483 aa23.5■■□□□ 1.35
TRAPPC12-220ENST00000482645 PPATQ06203 517 aa23.5■■□□□ 1.35
TRAPPC12-220ENST00000482645 SPRYD7Q5W111 196 aa23.5■■□□□ 1.35
TRAPPC12-220ENST00000482645 NEDD1Q8NHV4 660 aa23.5■■□□□ 1.35
TRAPPC12-220ENST00000482645 CCDC102AQ96A19 550 aa23.5■■□□□ 1.35
TRAPPC12-220ENST00000482645 CAPNS2Q96L46 248 aa23.5■■□□□ 1.35
TRAPPC12-220ENST00000482645 ZKSCAN3Q9BRR0 538 aa23.5■■□□□ 1.35
TRAPPC12-220ENST00000482645 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms