RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 FAM196BA6NMK8 535 aa14.7□□□□□ -0.06
FAM3D-202ENST00000482623 XRCC5P13010 732 aaKnown RBP14.7□□□□□ -0.06
FAM3D-202ENST00000482623 USP5P45974 858 aa14.7□□□□□ -0.06
FAM3D-202ENST00000482623 USP14P54578 494 aa14.7□□□□□ -0.06
FAM3D-202ENST00000482623 PDE3AQ14432 1141 aa14.7□□□□□ -0.06
FAM3D-202ENST00000482623 HABP4Q5JVS0 413 aaKnown RBP14.7□□□□□ -0.06
FAM3D-202ENST00000482623 USP17L2Q6R6M4 530 aa14.7□□□□□ -0.06
FAM3D-202ENST00000482623 MAGEB6Q8N7X4 407 aa14.7□□□□□ -0.06
FAM3D-202ENST00000482623 U2AF1L4Q8WU68 220 aaKnown RBP14.7□□□□□ -0.06
FAM3D-202ENST00000482623 C12orf42Q96LP6 360 aa14.7□□□□□ -0.06
FAM3D-202ENST00000482623 DNAJC18Q9H819 358 aa14.7□□□□□ -0.06
FAM3D-202ENST00000482623 TLR7Q9NYK1 1049 aaKnown RBP14.7□□□□□ -0.06
FAM3D-202ENST00000482623 GJD2Q9UKL4 321 aa14.7□□□□□ -0.06
FAM3D-202ENST00000482623 ZBTB21Q9ULJ3 1066 aa14.7□□□□□ -0.06
FAM3D-202ENST00000482623 EXOC6BQ9Y2D4 811 aa14.7□□□□□ -0.06
FAM3D-202ENST00000482623 IRX3P78415 501 aaPredicted RBP14.69□□□□□ -0.06
FAM3D-202ENST00000482623 GPRC5AQ8NFJ5 357 aa14.69□□□□□ -0.06
FAM3D-202ENST00000482623 SHISA4Q96DD7 197 aa14.69□□□□□ -0.06
FAM3D-202ENST00000482623 RIOK1Q9BRS2 568 aaKnown RBP14.69□□□□□ -0.06
FAM3D-202ENST00000482623 PAK6Q9NQU5 681 aaPredicted RBP14.69□□□□□ -0.06
FAM3D-202ENST00000482623 DOCK1Q14185 1865 aa14.69□□□□□ -0.06
FAM3D-202ENST00000482623 IFIT2P09913 472 aaKnown RBP14.68□□□□□ -0.06
FAM3D-202ENST00000482623 MAPK4P31152 587 aa14.68□□□□□ -0.06
FAM3D-202ENST00000482623 DYNLL1P63167 89 aaKnown RBP14.68□□□□□ -0.06
FAM3D-202ENST00000482623 MTMR2Q13614 643 aa14.68□□□□□ -0.06
FAM3D-202ENST00000482623 CCDC84Q86UT8 332 aaPredicted RBP14.68□□□□□ -0.06
FAM3D-202ENST00000482623 ANKLE1Q8NAG6 615 aa14.68□□□□□ -0.06
FAM3D-202ENST00000482623 P2RX7Q99572 595 aaKnown RBP14.68□□□□□ -0.06
FAM3D-202ENST00000482623 CRISPLD2Q9H0B8 497 aa14.68□□□□□ -0.06
FAM3D-202ENST00000482623 CABP5Q9NP86 173 aa14.68□□□□□ -0.06
FAM3D-202ENST00000482623 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.68□□□□□ -0.06
FAM3D-202ENST00000482623 NR2E3Q9Y5X4 410 aa14.68□□□□□ -0.06
FAM3D-202ENST00000482623 MAGEB6P1A0A0J9YX57 407 aa14.67□□□□□ -0.06
FAM3D-202ENST00000482623 HMGCRP04035 888 aa14.67□□□□□ -0.06
FAM3D-202ENST00000482623 INHAP05111 366 aa14.67□□□□□ -0.06
FAM3D-202ENST00000482623 HERVK_113P62684 666 aa14.67□□□□□ -0.06
FAM3D-202ENST00000482623 CERKLQ49MI3 558 aaPredicted RBP14.67□□□□□ -0.06
FAM3D-202ENST00000482623 SLC9C2Q5TAH2 1124 aa14.67□□□□□ -0.06
FAM3D-202ENST00000482623 LBX2Q6XYB7 198 aa14.67□□□□□ -0.06
FAM3D-202ENST00000482623 SOCS4Q8WXH5 440 aa14.67□□□□□ -0.06
FAM3D-202ENST00000482623 CRNKL1Q9BZJ0 848 aaKnown RBP14.67□□□□□ -0.06
FAM3D-202ENST00000482623 KIAA1683Q9H0B3 1180 aa14.67□□□□□ -0.06
FAM3D-202ENST00000482623 UNC93B1Q9H1C4 597 aa14.67□□□□□ -0.06
FAM3D-202ENST00000482623 ANTXR1Q9H6X2 564 aa14.67□□□□□ -0.06
FAM3D-202ENST00000482623 RPTORQ8N122 1335 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 PHIPQ8WWQ0 1821 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 USP17L15C9J2P7 530 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 USP17L13C9JLJ4 530 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 USP17L11C9JVI0 530 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 USP17L18D6R9N7 530 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 USP17L22D6RA61 530 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 USP17L17D6RBQ6 530 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 USP17L19D6RCP7 530 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 USP17L20D6RJB6 530 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 MYCP01106 439 aaPredicted RBP14.66□□□□□ -0.06
FAM3D-202ENST00000482623 ATP5JP18859 108 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 JAG1P78504 1218 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 GABPAQ06546 454 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 USP17L24Q0WX57 530 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 SIRT2Q8IXJ6 389 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 MIGA1Q8NAN2 632 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 EMILIN3Q9NT22 766 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 RBPJLQ9UBG7 517 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 RCAN3Q9UKA8 241 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 RABGAP1Q9Y3P9 1069 aa14.66□□□□□ -0.06
FAM3D-202ENST00000482623 GLRX3O76003 335 aaKnown RBP14.65□□□□□ -0.06
FAM3D-202ENST00000482623 GH2P01242 217 aa14.65□□□□□ -0.06
FAM3D-202ENST00000482623 TFRCP02786 760 aaKnown RBP14.65□□□□□ -0.06
FAM3D-202ENST00000482623 PDE6AP16499 860 aa14.65□□□□□ -0.06
FAM3D-202ENST00000482623 CCNA1P78396 465 aa14.65□□□□□ -0.06
FAM3D-202ENST00000482623 ABCB5Q2M3G0 1257 aa14.65□□□□□ -0.06
FAM3D-202ENST00000482623 DPF3Q92784 378 aa14.65□□□□□ -0.06
FAM3D-202ENST00000482623 NUDT12Q9BQG2 462 aa14.65□□□□□ -0.06
FAM3D-202ENST00000482623 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.65□□□□□ -0.06
FAM3D-202ENST00000482623 IL1RAPL2Q9NP60 686 aa14.65□□□□□ -0.06
FAM3D-202ENST00000482623 ATP8A2Q9NTI2 1148 aa14.65□□□□□ -0.06
FAM3D-202ENST00000482623 SWAP70Q9UH65 585 aa14.65□□□□□ -0.06
FAM3D-202ENST00000482623 SAP30BPQ9UHR5 308 aaKnown RBP14.65□□□□□ -0.06
FAM3D-202ENST00000482623 CEP290O15078 2479 aa14.64□□□□□ -0.07
FAM3D-202ENST00000482623 TCRBV5S4A2TA0A5A2 114 aa14.64□□□□□ -0.07
FAM3D-202ENST00000482623 FARP2O94887 1054 aaPredicted RBP14.64□□□□□ -0.07
FAM3D-202ENST00000482623 GDF11O95390 407 aa14.64□□□□□ -0.07
FAM3D-202ENST00000482623 POLR3DP05423 398 aaPredicted RBP14.64□□□□□ -0.07
FAM3D-202ENST00000482623 ELNP15502 786 aa14.64□□□□□ -0.07
FAM3D-202ENST00000482623 ERVK-9P63128 1117 aa14.64□□□□□ -0.07
FAM3D-202ENST00000482623 ERVK-24P63145 666 aa14.64□□□□□ -0.07
FAM3D-202ENST00000482623 CATSPERGQ6ZRH7 1159 aa14.64□□□□□ -0.07
FAM3D-202ENST00000482623 USP6NLQ92738 828 aa14.64□□□□□ -0.07
FAM3D-202ENST00000482623 HMX1Q9NP08 348 aaPredicted RBP14.64□□□□□ -0.07
FAM3D-202ENST00000482623 COG6Q9Y2V7 657 aa14.64□□□□□ -0.07
FAM3D-202ENST00000482623 PTPRFP10586 1907 aa14.64□□□□□ -0.07
FAM3D-202ENST00000482623 MAST2Q6P0Q8 1798 aa14.63□□□□□ -0.07
FAM3D-202ENST00000482623 H0YGN5 161 aa14.63□□□□□ -0.07
FAM3D-202ENST00000482623 ECM2O94769 699 aaPredicted RBP14.63□□□□□ -0.07
FAM3D-202ENST00000482623 PLCD1P51178 756 aa14.63□□□□□ -0.07
FAM3D-202ENST00000482623 UBE3CQ15386 1083 aa14.63□□□□□ -0.07
FAM3D-202ENST00000482623 MAP3K21Q5TCX8 1036 aa14.63□□□□□ -0.07
FAM3D-202ENST00000482623 ZSCAN25Q6NSZ9 544 aa14.63□□□□□ -0.07
FAM3D-202ENST00000482623 CCAR1Q8IX12 1150 aaKnown RBP14.63□□□□□ -0.07
FAM3D-202ENST00000482623 DEFB118Q96PH6 123 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms