RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 SGMS1Q86VZ5 419 aa14.71□□□□□ -0.05
IFT88-206ENST00000482172 CRACR2BQ8N4Y2 399 aaPredicted RBP14.71□□□□□ -0.05
IFT88-206ENST00000482172 NKX2-3Q8TAU0 364 aa14.71□□□□□ -0.05
IFT88-206ENST00000482172 TRPM4Q8TD43 1214 aa14.71□□□□□ -0.05
IFT88-206ENST00000482172 BRF1Q92994 677 aa14.71□□□□□ -0.05
IFT88-206ENST00000482172 ZNF274Q96GC6 653 aaPredicted RBP14.71□□□□□ -0.05
IFT88-206ENST00000482172 CCDC17Q96LX7 622 aa14.71□□□□□ -0.05
IFT88-206ENST00000482172 CSRNP1Q96S65 589 aa14.71□□□□□ -0.05
IFT88-206ENST00000482172 UBAC1Q9BSL1 405 aa14.71□□□□□ -0.05
IFT88-206ENST00000482172 WDR90Q96KV7 1748 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 TSPY2A6NKD2 308 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 IFIT3O14879 490 aaKnown RBP14.7□□□□□ -0.06
IFT88-206ENST00000482172 SHMT1P34896 483 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 HIRAP54198 1017 aaPredicted RBP14.7□□□□□ -0.06
IFT88-206ENST00000482172 TFAP4Q01664 338 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 MAP3K10Q02779 954 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 CUL4AQ13619 759 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 RASA3Q14644 834 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 SEC23AQ15436 765 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 TMEM67Q5HYA8 995 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 TATDN1Q6P1N9 297 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 SLC44A5Q8NCS7 719 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 NEDD1Q8NHV4 660 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 ANKS1AQ92625 1134 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 CHMP4CQ96CF2 233 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 ZSCAN10Q96SZ4 725 aaPredicted RBP14.7□□□□□ -0.06
IFT88-206ENST00000482172 LRRC2Q9BYS8 371 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 TPCN1Q9ULQ1 816 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 PPP2R3BQ9Y5P8 575 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 SIPA1L1O43166 1804 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 SCN4AP35499 1836 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 PLIN4Q96Q06 1357 aa14.7□□□□□ -0.06
IFT88-206ENST00000482172 TSPY3P0CV98 308 aa14.69□□□□□ -0.06
IFT88-206ENST00000482172 TSPY8P0CW00 308 aa14.69□□□□□ -0.06
IFT88-206ENST00000482172 WTAPQ15007 396 aa14.69□□□□□ -0.06
IFT88-206ENST00000482172 ANGEL2Q5VTE6 544 aaKnown RBP14.69□□□□□ -0.06
IFT88-206ENST00000482172 DGKHQ86XP1 1220 aa14.69□□□□□ -0.06
IFT88-206ENST00000482172 ZC3H15Q8WU90 426 aaKnown RBP14.69□□□□□ -0.06
IFT88-206ENST00000482172 INTS4Q96HW7 963 aaKnown RBP14.69□□□□□ -0.06
IFT88-206ENST00000482172 TRIM34Q9BYJ4 488 aa14.69□□□□□ -0.06
IFT88-206ENST00000482172 LY9Q9HBG7 655 aa14.69□□□□□ -0.06
IFT88-206ENST00000482172 TNKSO95271 1327 aa14.68□□□□□ -0.06
IFT88-206ENST00000482172 EPHX2P34913 555 aa14.68□□□□□ -0.06
IFT88-206ENST00000482172 RCAN1P53805 252 aa14.68□□□□□ -0.06
IFT88-206ENST00000482172 APOBRQ0VD83 1088 aa14.68□□□□□ -0.06
IFT88-206ENST00000482172 ME3Q16798 604 aa14.68□□□□□ -0.06
IFT88-206ENST00000482172 FAM47AQ5JRC9 791 aa14.68□□□□□ -0.06
IFT88-206ENST00000482172 PPP4R3BQ5MIZ7 849 aa14.68□□□□□ -0.06
IFT88-206ENST00000482172 NOL8Q76FK4 1167 aaKnown RBP14.68□□□□□ -0.06
IFT88-206ENST00000482172 HOOK2Q96ED9 719 aa14.68□□□□□ -0.06
IFT88-206ENST00000482172 TEPSINQ96N21 525 aa14.68□□□□□ -0.06
IFT88-206ENST00000482172 TMEM39BQ9GZU3 492 aa14.68□□□□□ -0.06
IFT88-206ENST00000482172 DEFB129Q9H1M3 183 aa14.68□□□□□ -0.06
IFT88-206ENST00000482172 DNAJC18Q9H819 358 aa14.68□□□□□ -0.06
IFT88-206ENST00000482172 ASTN2O75129 1339 aaPredicted RBP14.67□□□□□ -0.06
IFT88-206ENST00000482172 GOLGB1Q14789 3259 aaKnown RBP14.67□□□□□ -0.06
IFT88-206ENST00000482172 PFKFB2O60825 505 aa14.67□□□□□ -0.06
IFT88-206ENST00000482172 PDIA3P30101 505 aaKnown RBP14.67□□□□□ -0.06
IFT88-206ENST00000482172 NOVP48745 357 aa14.67□□□□□ -0.06
IFT88-206ENST00000482172 SLC4A3P48751 1232 aa14.67□□□□□ -0.06
IFT88-206ENST00000482172 PNMA8AQ86V59 439 aaPredicted RBP14.67□□□□□ -0.06
IFT88-206ENST00000482172 ENAHQ8N8S7 591 aaPredicted RBP14.67□□□□□ -0.06
IFT88-206ENST00000482172 ZKSCAN3Q9BRR0 538 aa14.67□□□□□ -0.06
IFT88-206ENST00000482172 LARP6Q9BRS8 491 aaKnown RBP14.67□□□□□ -0.06
IFT88-206ENST00000482172 SLKQ9H2G2 1235 aaPredicted RBP14.67□□□□□ -0.06
IFT88-206ENST00000482172 GPHNQ9NQX3 736 aaPredicted RBP14.67□□□□□ -0.06
IFT88-206ENST00000482172 IL17RBQ9NRM6 502 aa14.67□□□□□ -0.06
IFT88-206ENST00000482172 GGA3Q9NZ52 723 aa14.67□□□□□ -0.06
IFT88-206ENST00000482172 IGKV6D-41A0A0C4DH26 115 aa14.66□□□□□ -0.06
IFT88-206ENST00000482172 KLF18A0A0U1RQI7 1052 aa14.66□□□□□ -0.06
IFT88-206ENST00000482172 CCDC69A6NI79 296 aa14.66□□□□□ -0.06
IFT88-206ENST00000482172 LARGE1O95461 756 aa14.66□□□□□ -0.06
IFT88-206ENST00000482172 HSP90AA1P07900 732 aaKnown RBP14.66□□□□□ -0.06
IFT88-206ENST00000482172 CERKLQ49MI3 558 aaPredicted RBP14.66□□□□□ -0.06
IFT88-206ENST00000482172 IFIT1BQ5T764 474 aaKnown RBP14.66□□□□□ -0.06
IFT88-206ENST00000482172 SYNE3Q6ZMZ3 975 aa14.66□□□□□ -0.06
IFT88-206ENST00000482172 NFXL1Q6ZNB6 911 aa14.66□□□□□ -0.06
IFT88-206ENST00000482172 DCPSQ96C86 337 aaKnown RBP14.66□□□□□ -0.06
IFT88-206ENST00000482172 TAF1DQ9H5J8 278 aaPredicted RBP14.66□□□□□ -0.06
IFT88-206ENST00000482172 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.66□□□□□ -0.06
IFT88-206ENST00000482172 BRPF3Q9ULD4 1205 aa14.66□□□□□ -0.06
IFT88-206ENST00000482172 SLC12A7Q9Y666 1083 aa14.66□□□□□ -0.06
IFT88-206ENST00000482172 MYH8P13535 1937 aa14.66□□□□□ -0.06
IFT88-206ENST00000482172 NID2Q14112 1375 aa14.65□□□□□ -0.06
IFT88-206ENST00000482172 POTECB2RU33 542 aa14.65□□□□□ -0.06
IFT88-206ENST00000482172 AKR1B1P15121 316 aa14.65□□□□□ -0.06
IFT88-206ENST00000482172 PPP2R5BQ15173 497 aa14.65□□□□□ -0.06
IFT88-206ENST00000482172 RCSD1Q6JBY9 416 aa14.65□□□□□ -0.06
IFT88-206ENST00000482172 APOA5Q6Q788 366 aa14.65□□□□□ -0.06
IFT88-206ENST00000482172 GTF3C6Q969F1 213 aa14.65□□□□□ -0.06
IFT88-206ENST00000482172 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.65□□□□□ -0.06
IFT88-206ENST00000482172 CWC22Q9HCG8 908 aaKnown RBP14.65□□□□□ -0.06
IFT88-206ENST00000482172 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.65□□□□□ -0.06
IFT88-206ENST00000482172 GREB1LQ9C091 1923 aaPredicted RBP14.64□□□□□ -0.07
IFT88-206ENST00000482172 ZBTB43O43298 467 aa14.64□□□□□ -0.07
IFT88-206ENST00000482172 DHX16O60231 1041 aaKnown RBP14.64□□□□□ -0.07
IFT88-206ENST00000482172 NMT2O60551 498 aa14.64□□□□□ -0.07
IFT88-206ENST00000482172 DDAH1O94760 285 aa14.64□□□□□ -0.07
IFT88-206ENST00000482172 CALM1P0DP23 149 aa14.64□□□□□ -0.07
IFT88-206ENST00000482172 CALM2P0DP24 149 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms