RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 DCAF15Q66K64 600 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 C16orf86Q6ZW13 317 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 METTL16Q86W50 562 aaKnown RBP13.7□□□□□ -0.22
HPS4-212ENST00000481910 TBC1D10CQ8IV04 446 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 RASEFQ8IZ41 740 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 SLC44A5Q8NCS7 719 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 SMC1BQ8NDV3 1235 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 C22orf23Q9BZE7 217 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 RNF41Q9H4P4 317 aaPredicted RBP13.7□□□□□ -0.22
HPS4-212ENST00000481910 MKNK2Q9HBH9 465 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 ZNF287Q9HBT7 754 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 SWAP70Q9UH65 585 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 TAF6LQ9Y6J9 622 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 ROBO3Q96MS0 1386 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 SIPA1L1O43166 1804 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 STAG1Q8WVM7 1258 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 DNAJC18Q9H819 358 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 ZNF408Q9H9D4 720 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 LAMA4Q16363 1823 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 E7EWF7 191 aa13.69□□□□□ -0.22
HPS4-212ENST00000481910 PPP1R12BO60237 982 aaPredicted RBP13.69□□□□□ -0.22
HPS4-212ENST00000481910 MAP3K10Q02779 954 aa13.69□□□□□ -0.22
HPS4-212ENST00000481910 TRDNQ13061 729 aa13.69□□□□□ -0.22
HPS4-212ENST00000481910 TSGA10IPQ3SY00 556 aa13.69□□□□□ -0.22
HPS4-212ENST00000481910 RRP12Q5JTH9 1297 aaKnown RBP13.69□□□□□ -0.22
HPS4-212ENST00000481910 RBM46Q8TBY0 533 aaKnown RBP13.69□□□□□ -0.22
HPS4-212ENST00000481910 KCNB2Q92953 911 aa13.69□□□□□ -0.22
HPS4-212ENST00000481910 FZD1Q9UP38 647 aa13.69□□□□□ -0.22
HPS4-212ENST00000481910 SNX14Q9Y5W7 946 aa13.69□□□□□ -0.22
HPS4-212ENST00000481910 TACC3Q9Y6A5 838 aa13.69□□□□□ -0.22
HPS4-212ENST00000481910 FGRP09769 529 aa13.68□□□□□ -0.22
HPS4-212ENST00000481910 PCP11498 1178 aaKnown RBP13.68□□□□□ -0.22
HPS4-212ENST00000481910 SHMT1P34896 483 aa13.68□□□□□ -0.22
HPS4-212ENST00000481910 TATDN1Q6P1N9 297 aa13.68□□□□□ -0.22
HPS4-212ENST00000481910 ZNF444Q8N0Y2 327 aaPredicted RBP13.68□□□□□ -0.22
HPS4-212ENST00000481910 ZNF341Q9BYN7 854 aa13.68□□□□□ -0.22
HPS4-212ENST00000481910 CNNM2Q9H8M5 875 aa13.68□□□□□ -0.22
HPS4-212ENST00000481910 MYH8P13535 1937 aa13.68□□□□□ -0.22
HPS4-212ENST00000481910 PTMSP20962 102 aa13.68□□□□□ -0.22
HPS4-212ENST00000481910 TTLL12Q14166 644 aaPredicted RBP13.68□□□□□ -0.22
HPS4-212ENST00000481910 KRT32Q14532 448 aa13.68□□□□□ -0.22
HPS4-212ENST00000481910 CERKLQ49MI3 558 aaPredicted RBP13.68□□□□□ -0.22
HPS4-212ENST00000481910 STOX1Q6ZVD7 989 aa13.68□□□□□ -0.22
HPS4-212ENST00000481910 NCOA7Q8NI08 942 aa13.68□□□□□ -0.22
HPS4-212ENST00000481910 KRT23Q9C075 422 aa13.68□□□□□ -0.22
HPS4-212ENST00000481910 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.68□□□□□ -0.22
HPS4-212ENST00000481910 SSC5DA1L4H1 1573 aa13.67□□□□□ -0.22
HPS4-212ENST00000481910 NEDD4P46934 1319 aa13.67□□□□□ -0.22
HPS4-212ENST00000481910 ORC4O43929 436 aa13.67□□□□□ -0.22
HPS4-212ENST00000481910 RANBP6O60518 1105 aaKnown RBP13.67□□□□□ -0.22
HPS4-212ENST00000481910 USP2O75604 605 aaPredicted RBP13.67□□□□□ -0.22
HPS4-212ENST00000481910 CELF2O95319 508 aaKnown RBP13.67□□□□□ -0.22
HPS4-212ENST00000481910 ANAPC15P60006 121 aa13.67□□□□□ -0.22
HPS4-212ENST00000481910 ADCK5Q3MIX3 580 aa13.67□□□□□ -0.22
HPS4-212ENST00000481910 RALYLQ86SE5 291 aaKnown RBP13.67□□□□□ -0.22
HPS4-212ENST00000481910 PHF20L1A8MW92 1017 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 B4E1Z4 1266 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 RASA1P20936 1047 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 RBM25P49756 843 aaKnown RBP13.66□□□□□ -0.22
HPS4-212ENST00000481910 ESR2Q92731 530 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 KLRG1Q96E93 195 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 NEK1Q96PY6 1258 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 WRNIP1Q96S55 665 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 ANGEL1Q9UNK9 670 aaKnown RBP13.66□□□□□ -0.22
HPS4-212ENST00000481910 TSPY2A6NKD2 308 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 MPHOSPH10O00566 681 aaKnown RBP13.66□□□□□ -0.22
HPS4-212ENST00000481910 CLGNO14967 610 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 KDM4AO75164 1064 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 GDF11O95390 407 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 PSMA5P28066 241 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 IREB2P48200 963 aaKnown RBP13.66□□□□□ -0.22
HPS4-212ENST00000481910 FAM47AQ5JRC9 791 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 ARMC9Q7Z3E5 817 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 CNPY4Q8N129 248 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 CCDC17Q96LX7 622 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 JAKMIP1Q96N16 626 aaKnown RBP13.66□□□□□ -0.22
HPS4-212ENST00000481910 TBC1D32Q96NH3 1257 aa13.66□□□□□ -0.22
HPS4-212ENST00000481910 CTNND1O60716 968 aaKnown RBP13.65□□□□□ -0.22
HPS4-212ENST00000481910 TSPY3P0CV98 308 aa13.65□□□□□ -0.22
HPS4-212ENST00000481910 TSPY8P0CW00 308 aa13.65□□□□□ -0.22
HPS4-212ENST00000481910 INPP5BP32019 993 aa13.65□□□□□ -0.22
HPS4-212ENST00000481910 CAP2P40123 477 aa13.65□□□□□ -0.22
HPS4-212ENST00000481910 TFAP4Q01664 338 aa13.65□□□□□ -0.22
HPS4-212ENST00000481910 FSTL1Q12841 308 aa13.65□□□□□ -0.22
HPS4-212ENST00000481910 RRP1BQ14684 758 aaKnown RBP13.65□□□□□ -0.22
HPS4-212ENST00000481910 ABCB5Q2M3G0 1257 aa13.65□□□□□ -0.22
HPS4-212ENST00000481910 CST9Q5W186 159 aa13.65□□□□□ -0.22
HPS4-212ENST00000481910 MOB2Q70IA6 237 aa13.65□□□□□ -0.22
HPS4-212ENST00000481910 C2orf69Q8N8R5 385 aa13.65□□□□□ -0.22
HPS4-212ENST00000481910 CABP5Q9NP86 173 aa13.65□□□□□ -0.22
HPS4-212ENST00000481910 ZSWIM5Q9P217 1185 aa13.65□□□□□ -0.22
HPS4-212ENST00000481910 ZNF112Q9UJU3 913 aa13.65□□□□□ -0.22
HPS4-212ENST00000481910 PASKQ96RG2 1323 aa13.65□□□□□ -0.23
HPS4-212ENST00000481910 AKR1B1P15121 316 aa13.64□□□□□ -0.23
HPS4-212ENST00000481910 CASTP20810 708 aaKnown RBP13.64□□□□□ -0.23
HPS4-212ENST00000481910 NKX2-3Q8TAU0 364 aa13.64□□□□□ -0.23
HPS4-212ENST00000481910 ANP32BQ92688 251 aaKnown RBP13.64□□□□□ -0.23
HPS4-212ENST00000481910 ZKSCAN4Q969J2 545 aaPredicted RBP13.64□□□□□ -0.23
HPS4-212ENST00000481910 GBA2Q9HCG7 927 aaPredicted RBP13.64□□□□□ -0.23
HPS4-212ENST00000481910 TRPM7Q96QT4 1865 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms