RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 PABPC4Q13310 644 aaKnown RBP eCLIP28.51■■■□□ 2.15
TTC3-217ENST00000481605 SLC9C2Q5TAH2 1124 aa28.51■■■□□ 2.15
TTC3-217ENST00000481605 RIOK1Q9BRS2 568 aaKnown RBP28.51■■■□□ 2.15
TTC3-217ENST00000481605 GINM1Q9NU53 330 aa28.51■■■□□ 2.15
TTC3-217ENST00000481605 MGAMO43451 1857 aa28.51■■■□□ 2.15
TTC3-217ENST00000481605 BACE1P56817 501 aa28.5■■■□□ 2.15
TTC3-217ENST00000481605 ZBTB21Q9ULJ3 1066 aa28.5■■■□□ 2.15
TTC3-217ENST00000481605 GABRQQ9UN88 632 aa28.5■■■□□ 2.15
TTC3-217ENST00000481605 MAGEB6P1A0A0J9YX57 407 aa28.49■■■□□ 2.15
TTC3-217ENST00000481605 PDE6AP16499 860 aa28.49■■■□□ 2.15
TTC3-217ENST00000481605 MYH1P12882 1939 aa28.49■■■□□ 2.15
TTC3-217ENST00000481605 MTFR1Q15390 333 aa28.48■■■□□ 2.15
TTC3-217ENST00000481605 FAM110CQ1W6H9 321 aa28.48■■■□□ 2.15
TTC3-217ENST00000481605 ASCC2Q9H1I8 757 aaPredicted RBP28.48■■■□□ 2.15
TTC3-217ENST00000481605 SERPINB13Q9UIV8 391 aa28.48■■■□□ 2.15
TTC3-217ENST00000481605 TNPO2O14787 897 aaKnown RBP28.48■■■□□ 2.15
TTC3-217ENST00000481605 EDC3Q96F86 508 aaKnown RBP28.48■■■□□ 2.15
TTC3-217ENST00000481605 TMOD4Q9NZQ9 345 aa28.48■■■□□ 2.15
TTC3-217ENST00000481605 ZNF532Q9HCE3 1301 aa28.47■■■□□ 2.15
TTC3-217ENST00000481605 GCLCP48506 637 aaPredicted RBP28.47■■■□□ 2.15
TTC3-217ENST00000481605 TTC6Q86TZ1 520 aa28.47■■■□□ 2.15
TTC3-217ENST00000481605 EHD4Q9H223 541 aa28.47■■■□□ 2.15
TTC3-217ENST00000481605 BOLA2Q9H3K6 86 aa28.47■■■□□ 2.15
TTC3-217ENST00000481605 BIN2Q9UBW5 565 aaPredicted RBP28.47■■■□□ 2.15
TTC3-217ENST00000481605 C19orf81C9J6K1 198 aa28.46■■■□□ 2.15
TTC3-217ENST00000481605 USP17L10C9JJH3 530 aa28.46■■■□□ 2.15
TTC3-217ENST00000481605 FLT3LGP49771 235 aa28.46■■■□□ 2.15
TTC3-217ENST00000481605 TATDN1Q6P1N9 297 aa28.46■■■□□ 2.15
TTC3-217ENST00000481605 GH2P01242 217 aa28.45■■■□□ 2.15
TTC3-217ENST00000481605 SLAIN1Q8ND83 568 aa28.45■■■□□ 2.15
TTC3-217ENST00000481605 CRNKL1Q9BZJ0 848 aaKnown RBP28.45■■■□□ 2.15
TTC3-217ENST00000481605 PAG1Q9NWQ8 432 aa28.45■■■□□ 2.15
TTC3-217ENST00000481605 TCRBV5S4A2TA0A5A2 114 aa28.44■■■□□ 2.14
TTC3-217ENST00000481605 ATP5JP18859 108 aa28.44■■■□□ 2.14
TTC3-217ENST00000481605 LRRCC1Q9C099 1032 aa28.44■■■□□ 2.14
TTC3-217ENST00000481605 PLCD1P51178 756 aa28.43■■■□□ 2.14
TTC3-217ENST00000481605 IRX3P78415 501 aaPredicted RBP28.43■■■□□ 2.14
TTC3-217ENST00000481605 COA7Q96BR5 231 aa28.43■■■□□ 2.14
TTC3-217ENST00000481605 ADCY3O60266 1144 aa28.43■■■□□ 2.14
TTC3-217ENST00000481605 POLR3DP05423 398 aaPredicted RBP28.43■■■□□ 2.14
TTC3-217ENST00000481605 HOXA7P31268 230 aaPredicted RBP28.43■■■□□ 2.14
TTC3-217ENST00000481605 UBXN2AP68543 259 aa28.43■■■□□ 2.14
TTC3-217ENST00000481605 CCL5P13501 91 aa28.42■■■□□ 2.14
TTC3-217ENST00000481605 CERKLQ49MI3 558 aaPredicted RBP28.42■■■□□ 2.14
TTC3-217ENST00000481605 HAUS7Q99871 368 aa28.42■■■□□ 2.14
TTC3-217ENST00000481605 SMARCA5O60264 1052 aaPredicted RBP28.41■■■□□ 2.14
TTC3-217ENST00000481605 IRF5Q13568 498 aa28.41■■■□□ 2.14
TTC3-217ENST00000481605 LCORLQ8N3X6 602 aa28.41■■■□□ 2.14
TTC3-217ENST00000481605 MCM9Q9NXL9 1143 aa28.41■■■□□ 2.14
TTC3-217ENST00000481605 DDX60LQ5H9U9 1706 aaKnown RBP28.41■■■□□ 2.14
TTC3-217ENST00000481605 ELNP15502 786 aa28.4■■■□□ 2.14
TTC3-217ENST00000481605 RAB3GAP1Q15042 981 aa28.4■■■□□ 2.14
TTC3-217ENST00000481605 SDR42E1Q8WUS8 393 aa28.4■■■□□ 2.14
TTC3-217ENST00000481605 P2RX7Q99572 595 aaKnown RBP28.4■■■□□ 2.14
TTC3-217ENST00000481605 RNF208Q9H0X6 261 aa28.4■■■□□ 2.14
TTC3-217ENST00000481605 EMILIN3Q9NT22 766 aa28.4■■■□□ 2.14
TTC3-217ENST00000481605 TAOK2Q9UL54 1235 aa28.4■■■□□ 2.14
TTC3-217ENST00000481605 SHMT1P34896 483 aa28.39■■■□□ 2.14
TTC3-217ENST00000481605 ADD2P35612 726 aa28.39■■■□□ 2.14
TTC3-217ENST00000481605 ABCB5Q2M3G0 1257 aa28.39■■■□□ 2.14
TTC3-217ENST00000481605 SLFNL1Q499Z3 407 aa28.39■■■□□ 2.14
TTC3-217ENST00000481605 USP17L2Q6R6M4 530 aa28.39■■■□□ 2.14
TTC3-217ENST00000481605 PXYLP1Q8TE99 480 aa28.39■■■□□ 2.14
TTC3-217ENST00000481605 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.39■■■□□ 2.149e-9■□□□□ 10.8
TTC3-217ENST00000481605 NAV1Q8NEY1 1877 aa28.39■■■□□ 2.14
TTC3-217ENST00000481605 HERVK_113P62684 666 aa28.38■■■□□ 2.13
TTC3-217ENST00000481605 SHISA4Q96DD7 197 aa28.38■■■□□ 2.13
TTC3-217ENST00000481605 ARMT1Q9H993 441 aa28.38■■■□□ 2.13
TTC3-217ENST00000481605 DCP1AQ9NPI6 582 aaPredicted RBP28.38■■■□□ 2.13
TTC3-217ENST00000481605 MORF4L1Q9UBU8 362 aa28.38■■■□□ 2.13
TTC3-217ENST00000481605 GJB1P08034 283 aa28.38■■■□□ 2.13
TTC3-217ENST00000481605 EVX2Q03828 476 aa28.38■■■□□ 2.13
TTC3-217ENST00000481605 GABPAQ06546 454 aa28.38■■■□□ 2.13
TTC3-217ENST00000481605 NKX2-3Q8TAU0 364 aa28.38■■■□□ 2.13
TTC3-217ENST00000481605 FEZ1Q99689 392 aa28.38■■■□□ 2.13
TTC3-217ENST00000481605 CABP5Q9NP86 173 aa28.38■■■□□ 2.13
TTC3-217ENST00000481605 INHAP05111 366 aa28.37■■■□□ 2.13
TTC3-217ENST00000481605 GJA8P48165 433 aa28.37■■■□□ 2.13
TTC3-217ENST00000481605 ZYXQ15942 572 aaKnown RBP28.37■■■□□ 2.13
TTC3-217ENST00000481605 MBD4O95243 580 aa28.36■■■□□ 2.13
TTC3-217ENST00000481605 SLC34A2O95436 690 aa28.36■■■□□ 2.13
TTC3-217ENST00000481605 UNC93B1Q9H1C4 597 aa28.36■■■□□ 2.13
TTC3-217ENST00000481605 PEX10O60683 326 aa28.35■■■□□ 2.13
TTC3-217ENST00000481605 C12orf42Q96LP6 360 aa28.35■■■□□ 2.13
TTC3-217ENST00000481605 TXNRD2Q9NNW7 524 aa28.35■■■□□ 2.13
TTC3-217ENST00000481605 DOCK3Q8IZD9 2030 aa28.35■■■□□ 2.13
TTC3-217ENST00000481605 CHGBP05060 677 aa28.34■■■□□ 2.13
TTC3-217ENST00000481605 GPRC5AQ8NFJ5 357 aa28.34■■■□□ 2.13
TTC3-217ENST00000481605 DCTPP1Q9H773 170 aa28.34■■■□□ 2.13
TTC3-217ENST00000481605 PRKAB2O43741 272 aa28.33■■■□□ 2.13
TTC3-217ENST00000481605 USP14P54578 494 aa28.33■■■□□ 2.13
TTC3-217ENST00000481605 ACER1Q8TDN7 264 aa28.33■■■□□ 2.13
TTC3-217ENST00000481605 KIAA1683Q9H0B3 1180 aa28.33■■■□□ 2.13
TTC3-217ENST00000481605 RBPJLQ9UBG7 517 aa28.33■■■□□ 2.13
TTC3-217ENST00000481605 GJD2Q9UKL4 321 aa28.33■■■□□ 2.13
TTC3-217ENST00000481605 CYP2D6P10635 497 aa28.33■■■□□ 2.13
TTC3-217ENST00000481605 GUCY1A2P33402 732 aa28.33■■■□□ 2.13
TTC3-217ENST00000481605 UBE3CQ15386 1083 aa28.33■■■□□ 2.13
TTC3-217ENST00000481605 U2AF1L4Q8WU68 220 aaKnown RBP28.33■■■□□ 2.13
TTC3-217ENST00000481605 ATP8A2Q9NTI2 1148 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms