RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 IQUBQ8NA54 791 aa21.9■■□□□ 1.1
CCM2-214ENST00000481194 PLS1Q14651 629 aa21.9■■□□□ 1.1
CCM2-214ENST00000481194 PNPLA7Q6ZV29 1317 aa21.9■■□□□ 1.1
CCM2-214ENST00000481194 C21orf2O43822 256 aa21.9■■□□□ 1.1
CCM2-214ENST00000481194 KLHL10Q6JEL2 608 aa21.9■■□□□ 1.1
CCM2-214ENST00000481194 FAM43AQ8N2R8 423 aa21.9■■□□□ 1.1
CCM2-214ENST00000481194 FAM84BQ96KN1 310 aaPredicted RBP21.9■■□□□ 1.1
CCM2-214ENST00000481194 LMO7Q8WWI1 1683 aa21.9■■□□□ 1.1
CCM2-214ENST00000481194 STAG1Q8WVM7 1258 aa21.9■■□□□ 1.1
CCM2-214ENST00000481194 USP25Q9UHP3 1055 aa21.9■■□□□ 1.1
CCM2-214ENST00000481194 RGPD8O14715 1765 aaPredicted RBP21.89■■□□□ 1.1
CCM2-214ENST00000481194 ECE2O60344 883 aa21.89■■□□□ 1.1
CCM2-214ENST00000481194 GPATCH4Q5T3I0 446 aaKnown RBP21.89■■□□□ 1.1
CCM2-214ENST00000481194 SERPINB13Q9UIV8 391 aa21.89■■□□□ 1.1
CCM2-214ENST00000481194 MROH7-TTC4A0A0A0MT08 1334 aa21.89■■□□□ 1.1
CCM2-214ENST00000481194 ZNF165P49910 485 aa21.89■■□□□ 1.1
CCM2-214ENST00000481194 TTC38Q5R3I4 469 aa21.89■■□□□ 1.1
CCM2-214ENST00000481194 FOXP4Q8IVH2 680 aaPredicted RBP21.89■■□□□ 1.1
CCM2-214ENST00000481194 DEF6Q9H4E7 631 aa21.89■■□□□ 1.1
CCM2-214ENST00000481194 PI4KBQ9UBF8 816 aa21.89■■□□□ 1.1
CCM2-214ENST00000481194 IDEP14735 1019 aa21.89■■□□□ 1.09
CCM2-214ENST00000481194 PPP1R2P41236 205 aa21.89■■□□□ 1.09
CCM2-214ENST00000481194 FAM160A1Q05DH4 1040 aa21.89■■□□□ 1.09
CCM2-214ENST00000481194 LIFRP42702 1097 aa21.89■■□□□ 1.09
CCM2-214ENST00000481194 FERMT2Q96AC1 680 aa21.88■■□□□ 1.09
CCM2-214ENST00000481194 SH2B2O14492 632 aaPredicted RBP21.88■■□□□ 1.09
CCM2-214ENST00000481194 YEATS4O95619 227 aa21.88■■□□□ 1.09
CCM2-214ENST00000481194 SULF1Q8IWU6 871 aa21.88■■□□□ 1.09
CCM2-214ENST00000481194 PHKBQ93100 1093 aa21.88■■□□□ 1.09
CCM2-214ENST00000481194 UBN2Q6ZU65 1347 aa21.88■■□□□ 1.09
CCM2-214ENST00000481194 SPAG1Q07617 926 aa21.88■■□□□ 1.09
CCM2-214ENST00000481194 ADCK5Q3MIX3 580 aa21.88■■□□□ 1.09
CCM2-214ENST00000481194 NEMFO60524 1076 aa21.88■■□□□ 1.09
CCM2-214ENST00000481194 TTLL1O95922 423 aa21.88■■□□□ 1.09
CCM2-214ENST00000481194 PIK3AP1Q6ZUJ8 805 aa21.88■■□□□ 1.09
CCM2-214ENST00000481194 FBXO41Q8TF61 875 aa21.87■■□□□ 1.09
CCM2-214ENST00000481194 KANSL2Q9H9L4 492 aa21.87■■□□□ 1.09
CCM2-214ENST00000481194 JAK2O60674 1132 aa21.87■■□□□ 1.09
CCM2-214ENST00000481194 SUPT20HL1Q3ZLR7 823 aa21.87■■□□□ 1.09
CCM2-214ENST00000481194 RNF26Q9BY78 433 aaPredicted RBP21.87■■□□□ 1.09
CCM2-214ENST00000481194 PANK2Q9BZ23 570 aa21.87■■□□□ 1.09
CCM2-214ENST00000481194 RCAN1P53805 252 aa21.87■■□□□ 1.09
CCM2-214ENST00000481194 CSRNP1Q96S65 589 aa21.87■■□□□ 1.09
CCM2-214ENST00000481194 UBA5Q9GZZ9 404 aa21.87■■□□□ 1.09
CCM2-214ENST00000481194 PRKAB2O43741 272 aa21.86■■□□□ 1.09
CCM2-214ENST00000481194 PABPC4Q13310 644 aaKnown RBP eCLIP21.86■■□□□ 1.09
CCM2-214ENST00000481194 CUL4AQ13619 759 aa21.86■■□□□ 1.09
CCM2-214ENST00000481194 LETM2Q2VYF4 491 aa21.86■■□□□ 1.09
CCM2-214ENST00000481194 TRIM21P19474 475 aaKnown RBP21.86■■□□□ 1.09
CCM2-214ENST00000481194 HAUS3Q68CZ6 603 aa21.86■■□□□ 1.09
CCM2-214ENST00000481194 APOA5Q6Q788 366 aa21.86■■□□□ 1.09
CCM2-214ENST00000481194 SCLT1Q96NL6 688 aa21.86■■□□□ 1.09
CCM2-214ENST00000481194 CTAGE1Q96RT6 745 aa21.86■■□□□ 1.09
CCM2-214ENST00000481194 TTC14Q96N46 770 aa21.86■■□□□ 1.09
CCM2-214ENST00000481194 ROBO1Q9Y6N7 1651 aa21.86■■□□□ 1.09
CCM2-214ENST00000481194 SCG2P13521 617 aa21.86■■□□□ 1.09
CCM2-214ENST00000481194 GSDMDP57764 484 aa21.86■■□□□ 1.09
CCM2-214ENST00000481194 REXO1Q8N1G1 1221 aaKnown RBP21.86■■□□□ 1.09
CCM2-214ENST00000481194 TBC1D16Q8TBP0 767 aa21.86■■□□□ 1.09
CCM2-214ENST00000481194 FAM200AQ8TCP9 573 aa21.86■■□□□ 1.09
CCM2-214ENST00000481194 CRKP46108 304 aa21.85■■□□□ 1.09
CCM2-214ENST00000481194 DHX58Q96C10 678 aa21.85■■□□□ 1.09
CCM2-214ENST00000481194 USP14P54578 494 aa21.85■■□□□ 1.09
CCM2-214ENST00000481194 CETN1Q12798 172 aa21.85■■□□□ 1.09
CCM2-214ENST00000481194 DKC1O60832 514 aaKnown RBP eCLIP21.85■■□□□ 1.09
CCM2-214ENST00000481194 FMNL1O95466 1100 aaPredicted RBP21.85■■□□□ 1.09
CCM2-214ENST00000481194 USP17L8P0C7I0 530 aa21.85■■□□□ 1.09
CCM2-214ENST00000481194 ZNF174Q15697 407 aa21.85■■□□□ 1.09
CCM2-214ENST00000481194 CDC37L1Q7L3B6 337 aa21.85■■□□□ 1.09
CCM2-214ENST00000481194 CCAR2Q8N163 923 aaKnown RBP21.85■■□□□ 1.09
CCM2-214ENST00000481194 KLRF2D3W0D1 207 aa21.84■■□□□ 1.09
CCM2-214ENST00000481194 ODF2Q5BJF6 829 aa21.84■■□□□ 1.09
CCM2-214ENST00000481194 PSMA7O14818 248 aa21.84■■□□□ 1.09
CCM2-214ENST00000481194 DIXDC1Q155Q3 683 aa21.84■■□□□ 1.09
CCM2-214ENST00000481194 SCRN1Q12765 414 aa21.84■■□□□ 1.09
CCM2-214ENST00000481194 MNS1Q8NEH6 495 aa21.84■■□□□ 1.09
CCM2-214ENST00000481194 ALDH8A1Q9H2A2 487 aaPredicted RBP21.84■■□□□ 1.09
CCM2-214ENST00000481194 BIN1O00499 593 aa21.84■■□□□ 1.09
CCM2-214ENST00000481194 RAD17O75943 681 aa21.84■■□□□ 1.09
CCM2-214ENST00000481194 GYS1P13807 737 aa21.84■■□□□ 1.09
CCM2-214ENST00000481194 SLFN13Q68D06 897 aa21.84■■□□□ 1.09
CCM2-214ENST00000481194 PLSCR1O15162 318 aa21.83■■□□□ 1.09
CCM2-214ENST00000481194 SFPQP23246 707 aaKnown RBP eCLIP21.83■■□□□ 1.09
CCM2-214ENST00000481194 MRPL11Q9Y3B7 192 aaKnown RBP21.83■■□□□ 1.09
CCM2-214ENST00000481194 ASIC1P78348 528 aa21.83■■□□□ 1.09
CCM2-214ENST00000481194 ZBTB7AO95365 584 aa21.83■■□□□ 1.09
CCM2-214ENST00000481194 LEO1Q8WVC0 666 aaPredicted RBP21.83■■□□□ 1.09
CCM2-214ENST00000481194 PDCL3Q9H2J4 239 aa21.83■■□□□ 1.09
CCM2-214ENST00000481194 AFMP43652 599 aa21.83■■□□□ 1.08
CCM2-214ENST00000481194 DGKHQ86XP1 1220 aa21.83■■□□□ 1.08
CCM2-214ENST00000481194 CCNT1O60563 726 aaKnown RBP21.82■■□□□ 1.08
CCM2-214ENST00000481194 MTIF2P46199 727 aaKnown RBP21.82■■□□□ 1.08
CCM2-214ENST00000481194 TSGA10IPQ3SY00 556 aa21.82■■□□□ 1.08
CCM2-214ENST00000481194 BLIDQ8IZY5 108 aa21.82■■□□□ 1.08
CCM2-214ENST00000481194 GPR101Q96P66 508 aaPredicted RBP21.82■■□□□ 1.08
CCM2-214ENST00000481194 BICDL2A1A5D9 508 aa21.82■■□□□ 1.08
CCM2-214ENST00000481194 USP37Q86T82 979 aa21.82■■□□□ 1.08
CCM2-214ENST00000481194 NOSTRINQ8IVI9 506 aa21.82■■□□□ 1.08
CCM2-214ENST00000481194 CCDC40Q4G0X9 1142 aa21.82■■□□□ 1.08
CCM2-214ENST00000481194 PRDX5P30044 214 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms