RNA–Protein interactions for RNA: ENST00000480911.5

CACNA1C-225, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5 BASIC

Gene CACNA1C, Length 6,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-225ENST00000480911 SSRP1Q08945 709 aaKnown RBP10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 ACBD5Q5T8D3 534 aaPredicted RBP10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 XAGE3Q8WTP9 111 aa10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 NMIQ13287 307 aaPredicted RBP10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 VPS52Q8N1B4 723 aa10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 IL17RAQ96F46 866 aa10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 CARD10Q9BWT7 1032 aa10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 STMN1P16949 149 aa10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 NBPF11Q86T75 865 aa10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 PFKFB2O60825 505 aa10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 MYCP01106 439 aaPredicted RBP10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 OSBPP22059 807 aa10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 ECE1P42892 770 aa10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 CCDC12Q8WUD4 166 aaPredicted RBP10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 TFIP11Q9UBB9 837 aaKnown RBP10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 PHLPP2Q6ZVD8 1323 aa10.35□□□□□ -0.75
CACNA1C-225ENST00000480911 TMEM110-MUSTN1A8MSY1 372 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 ERVV-2B6SEH9 535 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 NLRP12P59046 1061 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 PLCB3Q01970 1234 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 UBE3BQ7Z3V4 1068 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 CCDC170Q8IYT3 715 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 VAT1LQ9HCJ6 419 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 MTIF2P46199 727 aaKnown RBP10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 IFI16Q16666 785 aaKnown RBP10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 PTPDC1A2A3K4 754 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 HMGB1P1B2RPK0 211 aaPredicted RBP10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 RNF113AO15541 343 aaKnown RBP10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 TMTC1Q8IUR5 882 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 CHMP6Q96FZ7 201 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 BAG1Q99933 345 aaPredicted RBP10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 MTA3Q9BTC8 594 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 ARHGEF10LQ9HCE6 1279 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 MED4Q9NPJ6 270 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 RCOR1Q9UKL0 485 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 PXDNLA1KZ92 1463 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 CASQ2O14958 399 aaPredicted RBP10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 SLC27A2O14975 620 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 IRX5P78411 483 aaPredicted RBP10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 LRRC43Q8N309 656 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 TBC1D5Q92609 795 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 TBC1D31Q96DN5 1066 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 MAP3K19Q56UN5 1328 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 RNMTO43148 476 aaKnown RBP10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 SKIV2LQ15477 1246 aaKnown RBP10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 TSGA10IPQ3SY00 556 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 AOPEPQ8N6M6 819 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 RABGGTAQ92696 567 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 NUF2Q9BZD4 464 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 LSG1Q9H089 658 aaKnown RBP10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 RABGAP1Q9Y3P9 1069 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 SLC12A7Q9Y666 1083 aa10.34□□□□□ -0.75
CACNA1C-225ENST00000480911 IGSF1Q8N6C5 1336 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 POLA2Q14181 598 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 COPS6Q7L5N1 327 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 POTEDQ86YR6 584 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 ATP2A3Q93084 1043 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 SLC10A4Q96EP9 437 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 CTAGE9A4FU28 777 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 PPEF1O14829 653 aaPredicted RBP10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 KRT86O43790 486 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 BPIFA3Q9BQP9 254 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 USP42Q9H9J4 1324 aaKnown RBP10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 M0QZ92 97 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 STK25O00506 426 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 IREB2P48200 963 aaKnown RBP10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 GNAQP50148 359 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 LCA5Q86VQ0 697 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 CCDC110Q8TBZ0 833 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 NCAPD2Q15021 1401 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 IQGAP1P46940 1657 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 TSPY2A6NKD2 308 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 APBA1Q02410 837 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 CCDC50Q8IVM0 306 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 KBTBD3Q8NAB2 608 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 TRIM7Q9C029 511 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 TSPY3P0CV98 308 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 TSPY8P0CW00 308 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 METAP2P50579 478 aaKnown RBP eCLIP10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 ARID5AQ03989 594 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 SLC9A5Q14940 896 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 WHAMMP3Q1A5X7 153 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 AKNAD1Q5T1N1 836 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 PPP1R21Q6ZMI0 780 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 EYA1Q99502 592 aa10.33□□□□□ -0.76
CACNA1C-225ENST00000480911 ZEB2O60315 1214 aa10.32□□□□□ -0.76
CACNA1C-225ENST00000480911 STX10O60499 249 aa10.32□□□□□ -0.76
CACNA1C-225ENST00000480911 PPP2R5DQ14738 602 aa10.32□□□□□ -0.76
CACNA1C-225ENST00000480911 DDX27Q96GQ7 796 aaKnown RBP10.32□□□□□ -0.76
CACNA1C-225ENST00000480911 KIF2CQ99661 725 aa10.32□□□□□ -0.76
CACNA1C-225ENST00000480911 USP44Q9H0E7 712 aa10.32□□□□□ -0.76
CACNA1C-225ENST00000480911 KDRP35968 1356 aa10.32□□□□□ -0.76
CACNA1C-225ENST00000480911 CLTCL1P53675 1640 aa10.32□□□□□ -0.76
CACNA1C-225ENST00000480911 CMA1P23946 247 aa10.32□□□□□ -0.76
CACNA1C-225ENST00000480911 Q6ZUG5 572 aa10.32□□□□□ -0.76
CACNA1C-225ENST00000480911 CCDC24Q8N4L8 307 aa10.32□□□□□ -0.76
CACNA1C-225ENST00000480911 KAT14Q9H8E8 782 aa10.32□□□□□ -0.76
CACNA1C-225ENST00000480911 ABCC3O15438 1527 aa10.32□□□□□ -0.76
CACNA1C-225ENST00000480911 PPFIA2O75334 1257 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms