RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CNBD1Q8NA66 436 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 SLC5A4Q9NY91 659 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 KRT25Q7Z3Z0 450 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 PBRM1Q86U86 1689 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 GCC2Q8IWJ2 1684 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 N4BP1O75113 896 aaKnown RBP10.58□□□□□ -0.72
VEGFA-212ENST00000480614 RIOK1Q9BRS2 568 aaKnown RBP10.58□□□□□ -0.72
VEGFA-212ENST00000480614 BIN2Q9UBW5 565 aaPredicted RBP10.58□□□□□ -0.72
VEGFA-212ENST00000480614 ASIC3Q9UHC3 531 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 CCDC169A6NNP5 214 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 CCNT1O60563 726 aaKnown RBP10.58□□□□□ -0.72
VEGFA-212ENST00000480614 SECISBP2LQ93073 1101 aaKnown RBP10.58□□□□□ -0.72
VEGFA-212ENST00000480614 CD2APQ9Y5K6 639 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 DISP3Q9P2K9 1392 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 AK2P54819 239 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 CSGALNACT2Q8N6G5 542 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 CCDC51Q96ER9 411 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 Q9H521 79 aa10.58□□□□□ -0.72
VEGFA-212ENST00000480614 GOLGA8QA0A0J9YX86 632 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 GOLGA8OA6NCC3 632 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 GOLGA8NF8WBI6 632 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 WDR46O15213 610 aaKnown RBP10.57□□□□□ -0.72
VEGFA-212ENST00000480614 PIK3C2GO75747 1445 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 PARP10Q53GL7 1025 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 HOXB7P09629 217 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 CCDC170Q8IYT3 715 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 MICAL3Q7RTP6 2002 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 PAK1Q13153 545 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 CASC4Q6P4E1 433 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 YTHDC2Q9H6S0 1430 aaKnown RBP10.57□□□□□ -0.72
VEGFA-212ENST00000480614 ADGRF5Q8IZF2 1346 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 ADCY7P51828 1080 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 CALCRLQ16602 461 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 SFMBT2Q5VUG0 894 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 TEX11Q8IYF3 940 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 IVNS1ABPQ9Y6Y0 642 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 TBC1D22AQ8WUA7 517 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 AFG3L2Q9Y4W6 797 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 SYCP2Q9BX26 1530 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 SYT10Q6XYQ8 523 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 IQSEC3Q9UPP2 1182 aaPredicted RBP10.57□□□□□ -0.72
VEGFA-212ENST00000480614 KRT9P35527 623 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 PPP1R21Q6ZMI0 780 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 IPO11Q9UI26 975 aaKnown RBP10.57□□□□□ -0.72
VEGFA-212ENST00000480614 TRPC6Q9Y210 931 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 NPATQ14207 1427 aa10.57□□□□□ -0.72
VEGFA-212ENST00000480614 PRIM1P49642 420 aaKnown RBP10.56□□□□□ -0.72
VEGFA-212ENST00000480614 PHLDB3Q6NSJ2 640 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 REXO1Q8N1G1 1221 aaKnown RBP10.56□□□□□ -0.72
VEGFA-212ENST00000480614 NT5C3AQ9H0P0 336 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 DNM3Q9UQ16 869 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 GOLGA8CPA6NN73 597 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 PPFIA4O75335 1185 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 MEIS3Q99687 375 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 RPS6KB1P23443 525 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 STX17P56962 302 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 ZBTB21Q9ULJ3 1066 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 A2MP01023 1474 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 AKNAD1Q5T1N1 836 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 PEX26Q7Z412 305 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 DCTPP1Q9H773 170 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 SPC25Q9HBM1 224 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 FAN1Q9Y2M0 1017 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 PSDA5PKW4 1024 aaPredicted RBP10.56□□□□□ -0.72
VEGFA-212ENST00000480614 APOBRQ0VD83 1088 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 CEP85Q6P2H3 762 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 TPCN1Q9ULQ1 816 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 TTC38Q5R3I4 469 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 ARHGEF2Q92974 986 aaKnown RBP10.56□□□□□ -0.72
VEGFA-212ENST00000480614 HSPA8P11142 646 aaKnown RBP10.56□□□□□ -0.72
VEGFA-212ENST00000480614 RPS6KA2Q15349 733 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 SUPT20HQ8NEM7 779 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 PRAG1Q86YV5 1406 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 ARHGAP6O43182 974 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 KRT3P12035 628 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 LETM2Q2VYF4 491 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 SPATS2Q86XZ4 545 aaKnown RBP10.56□□□□□ -0.72
VEGFA-212ENST00000480614 PDE4DQ08499 809 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 VSIG1Q86XK7 387 aa10.56□□□□□ -0.72
VEGFA-212ENST00000480614 UGGT2Q9NYU1 1516 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 FAM8A1Q9UBU6 413 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 SH3TC1Q8TE82 1336 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 HARSP12081 509 aaKnown RBP10.55□□□□□ -0.72
VEGFA-212ENST00000480614 ARHGAP4P98171 946 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 RPS6KA1Q15418 735 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 MRPL44Q9H9J2 332 aaKnown RBP10.55□□□□□ -0.72
VEGFA-212ENST00000480614 SHANK2Q9UPX8 1470 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 SLC1A4P43007 532 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 CLNS1AP54105 237 aaKnown RBP10.55□□□□□ -0.72
VEGFA-212ENST00000480614 TRAPPC3LQ5T215 181 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 CTTNBP2NLQ9P2B4 639 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.55□□□□□ -0.721e-11■□□□□ 9.4
VEGFA-212ENST00000480614 ZMYM4Q5VZL5 1548 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 RNF10Q8N5U6 811 aaKnown RBP10.55□□□□□ -0.72
VEGFA-212ENST00000480614 TCEANC2Q96MN5 208 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 ZBED4O75132 1171 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 PPFIA3O75145 1194 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 SND1Q7KZF4 910 aaKnown RBP eCLIP10.55□□□□□ -0.723e-9■■□□□ 11.6
VEGFA-212ENST00000480614 ATF7P17544 494 aaPredicted RBP10.55□□□□□ -0.72
VEGFA-212ENST00000480614 RFC1P35251 1148 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms