RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 PLA2G4DQ86XP0 818 aa15.03■□□□□ -0
SEC13-216ENST00000479868 WDR66Q8TBY9 1149 aa15.03■□□□□ -0
SEC13-216ENST00000479868 FBXW7Q969H0 707 aa15.03■□□□□ -0
SEC13-216ENST00000479868 CLIC6Q96NY7 704 aa15.03■□□□□ -0
SEC13-216ENST00000479868 RNF26Q9BY78 433 aaPredicted RBP15.03■□□□□ -0
SEC13-216ENST00000479868 TRIM5Q9C035 493 aa15.03■□□□□ -0
SEC13-216ENST00000479868 KIAA1468Q9P260 1216 aa15.03■□□□□ -0
SEC13-216ENST00000479868 USP17L8P0C7I0 530 aa15.02■□□□□ -0
SEC13-216ENST00000479868 DIXDC1Q155Q3 683 aa15.02■□□□□ -0
SEC13-216ENST00000479868 PKN1Q16512 942 aa15.02■□□□□ -0
SEC13-216ENST00000479868 SBK1Q52WX2 424 aa15.02■□□□□ -0
SEC13-216ENST00000479868 TMED8Q6PL24 325 aaPredicted RBP15.02■□□□□ -0
SEC13-216ENST00000479868 JMYQ8N9B5 988 aa15.02■□□□□ -0
SEC13-216ENST00000479868 OXER1Q8TDS5 423 aa15.02■□□□□ -0
SEC13-216ENST00000479868 FOXP1Q9H334 677 aaPredicted RBP15.02■□□□□ -0
SEC13-216ENST00000479868 KCNF1Q9H3M0 494 aa15.02■□□□□ -0
SEC13-216ENST00000479868 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.02■□□□□ -0
SEC13-216ENST00000479868 MCM9Q9NXL9 1143 aa15.02■□□□□ -0
SEC13-216ENST00000479868 hCG_1642624A0A1W2PR95 340 aa15.02□□□□□ -0.01
SEC13-216ENST00000479868 TRIM37O94972 964 aa15.02□□□□□ -0.01
SEC13-216ENST00000479868 ZNF75DP51815 510 aa15.02□□□□□ -0.01
SEC13-216ENST00000479868 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.02□□□□□ -0.01
SEC13-216ENST00000479868 ZNF804AQ7Z570 1209 aa15.02□□□□□ -0.01
SEC13-216ENST00000479868 DHX40Q8IX18 779 aaKnown RBP15.02□□□□□ -0.01
SEC13-216ENST00000479868 MKRN1Q9UHC7 482 aaKnown RBP15.02□□□□□ -0.01
SEC13-216ENST00000479868 HPSEQ9Y251 543 aa15.02□□□□□ -0.01
SEC13-216ENST00000479868 GOLGA6L19H0YKK7 550 aa15.01□□□□□ -0.01
SEC13-216ENST00000479868 ST5P78524 1137 aa15.01□□□□□ -0.01
SEC13-216ENST00000479868 SLC27A3Q5K4L6 730 aa15.01□□□□□ -0.01
SEC13-216ENST00000479868 BAZ2BQ9UIF8 2168 aaKnown RBP15.01□□□□□ -0.01
SEC13-216ENST00000479868 UFL1O94874 794 aa15□□□□□ -0.01
SEC13-216ENST00000479868 SYKP43405 635 aa15□□□□□ -0.01
SEC13-216ENST00000479868 DDR1Q08345 913 aa15□□□□□ -0.01
SEC13-216ENST00000479868 C15orf52Q6ZUT6 534 aaKnown RBP15□□□□□ -0.01
SEC13-216ENST00000479868 SH3RF3Q8TEJ3 882 aaPredicted RBP15□□□□□ -0.01
SEC13-216ENST00000479868 VPS54Q9P1Q0 977 aa15□□□□□ -0.01
SEC13-216ENST00000479868 SLC3A2P08195 630 aaKnown RBP15□□□□□ -0.01
SEC13-216ENST00000479868 DPCR1Q3MIW9 517 aa15□□□□□ -0.01
SEC13-216ENST00000479868 RESP18Q5W5W9 173 aa15□□□□□ -0.01
SEC13-216ENST00000479868 CEP57L1Q8IYX8 460 aa15□□□□□ -0.01
SEC13-216ENST00000479868 C17orf53Q8N3J3 647 aaPredicted RBP15□□□□□ -0.01
SEC13-216ENST00000479868 V9GY48 417 aaPredicted RBP15□□□□□ -0.01
SEC13-216ENST00000479868 GOLGA6L6A8MZA4 724 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 PRPF3O43395 683 aaKnown RBP14.99□□□□□ -0.01
SEC13-216ENST00000479868 DDAH1O94760 285 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 AKAP17AQ02040 695 aaKnown RBP14.99□□□□□ -0.01
SEC13-216ENST00000479868 PDE4BQ07343 736 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 PIBF1Q8WXW3 757 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 RBM28Q9NW13 759 aaKnown RBP14.99□□□□□ -0.01
SEC13-216ENST00000479868 FAM237AA0A1B0GTK4 181 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 TSPY2A6NKD2 308 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 BECN2A8MW95 431 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 BIN1O00499 593 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 CUTAO60888 179 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 CALM1P0DP23 149 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 CALM2P0DP24 149 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 CALM3P0DP25 149 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 USP5P45974 858 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 RILPL1Q5EBL4 403 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 TMTC3Q6ZXV5 915 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 KRT27Q7Z3Y8 459 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 AOPEPQ8N6M6 819 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 RBM17Q96I25 401 aaKnown RBP14.99□□□□□ -0.01
SEC13-216ENST00000479868 TIGD1Q96MW7 591 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 CD209Q9NNX6 404 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 NRBP1Q9UHY1 535 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 PCDHB6Q9Y5E3 794 aa14.99□□□□□ -0.01
SEC13-216ENST00000479868 POLRMTO00411 1230 aaKnown RBP14.98□□□□□ -0.01
SEC13-216ENST00000479868 PTGS1P23219 599 aa14.98□□□□□ -0.01
SEC13-216ENST00000479868 GRIN1Q05586 938 aa14.98□□□□□ -0.01
SEC13-216ENST00000479868 SPECC1Q5M775 1068 aa14.98□□□□□ -0.01
SEC13-216ENST00000479868 C12orf60Q5U649 245 aa14.98□□□□□ -0.01
SEC13-216ENST00000479868 RCSD1Q6JBY9 416 aa14.98□□□□□ -0.01
SEC13-216ENST00000479868 SARM1Q6SZW1 724 aa14.98□□□□□ -0.01
SEC13-216ENST00000479868 PROM2Q8N271 834 aa14.98□□□□□ -0.01
SEC13-216ENST00000479868 KRI1Q8N9T8 703 aaKnown RBP14.98□□□□□ -0.01
SEC13-216ENST00000479868 DYNLL2Q96FJ2 89 aa14.98□□□□□ -0.01
SEC13-216ENST00000479868 PHF20Q9BVI0 1012 aa14.98□□□□□ -0.01
SEC13-216ENST00000479868 GGA1Q9UJY5 639 aa14.98□□□□□ -0.01
SEC13-216ENST00000479868 FAM205CA6NFA0 338 aa14.98□□□□□ -0.01
SEC13-216ENST00000479868 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.98□□□□□ -0.01
SEC13-216ENST00000479868 DRC7Q8IY82 874 aa14.98□□□□□ -0.01
SEC13-216ENST00000479868 SRBD1Q8N5C6 995 aaKnown RBP14.98□□□□□ -0.01
SEC13-216ENST00000479868 CABP5Q9NP86 173 aa14.98□□□□□ -0.01
SEC13-216ENST00000479868 CNTNAP5Q8WYK1 1306 aa14.98□□□□□ -0.01
SEC13-216ENST00000479868 CDK5RAP2Q96SN8 1893 aa14.97□□□□□ -0.01
SEC13-216ENST00000479868 TPM3P06753 285 aa14.97□□□□□ -0.01
SEC13-216ENST00000479868 ATP2B4P23634 1241 aa14.97□□□□□ -0.01
SEC13-216ENST00000479868 GSTO1P78417 241 aa14.97□□□□□ -0.01
SEC13-216ENST00000479868 EARS2Q5JPH6 523 aaKnown RBP14.97□□□□□ -0.01
SEC13-216ENST00000479868 CCDC186Q7Z3E2 898 aa14.97□□□□□ -0.01
SEC13-216ENST00000479868 TGFBRAP1Q8WUH2 860 aa14.97□□□□□ -0.01
SEC13-216ENST00000479868 NAT10Q9H0A0 1025 aaKnown RBP14.97□□□□□ -0.01
SEC13-216ENST00000479868 POLLQ9UGP5 575 aa14.97□□□□□ -0.01
SEC13-216ENST00000479868 PYCARDQ9ULZ3 195 aa14.97□□□□□ -0.01
SEC13-216ENST00000479868 NAV1Q8NEY1 1877 aa14.97□□□□□ -0.01
SEC13-216ENST00000479868 IL1R1P14778 569 aa14.97□□□□□ -0.01
SEC13-216ENST00000479868 XBP1P17861 261 aa14.97□□□□□ -0.01
SEC13-216ENST00000479868 ATP2B1P20020 1258 aa14.97□□□□□ -0.01
SEC13-216ENST00000479868 PPP4CP60510 307 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms