RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 TBC1D12O60347 775 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 TSPY3P0CV98 308 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 TSPY8P0CW00 308 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 SHMT1P34896 483 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 LIFRP42702 1097 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 TMEM67Q5HYA8 995 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 TATDN1Q6P1N9 297 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 PNMA8AQ86V59 439 aaPredicted RBP16.68■□□□□ 0.26
RPP40-205ENST00000479782 TMTC2Q8N394 836 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 NKX2-3Q8TAU0 364 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 IGDCC4Q8TDY8 1250 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 ZC3H15Q8WU90 426 aaKnown RBP16.68■□□□□ 0.26
RPP40-205ENST00000479782 BRF1Q92994 677 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 HOOK2Q96ED9 719 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 CCDC17Q96LX7 622 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 ZSCAN10Q96SZ4 725 aaPredicted RBP16.68■□□□□ 0.26
RPP40-205ENST00000479782 LRRC2Q9BYS8 371 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 DEFB129Q9H1M3 183 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 SH2B1Q9NRF2 756 aaPredicted RBP16.68■□□□□ 0.26
RPP40-205ENST00000479782 TCP11L1Q9NUJ3 509 aa16.68■□□□□ 0.26
RPP40-205ENST00000479782 EVCP57679 992 aa16.67■□□□□ 0.26
RPP40-205ENST00000479782 TFAP4Q01664 338 aa16.67■□□□□ 0.26
RPP40-205ENST00000479782 FAM47AQ5JRC9 791 aa16.67■□□□□ 0.26
RPP40-205ENST00000479782 NOL8Q76FK4 1167 aaKnown RBP16.67■□□□□ 0.26
RPP40-205ENST00000479782 SGMS1Q86VZ5 419 aa16.67■□□□□ 0.26
RPP40-205ENST00000479782 DCPSQ96C86 337 aaKnown RBP16.67■□□□□ 0.26
RPP40-205ENST00000479782 TEPSINQ96N21 525 aa16.67■□□□□ 0.26
RPP40-205ENST00000479782 TAF1DQ9H5J8 278 aaPredicted RBP16.67■□□□□ 0.26
RPP40-205ENST00000479782 DNAJC18Q9H819 358 aa16.67■□□□□ 0.26
RPP40-205ENST00000479782 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.67■□□□□ 0.26
RPP40-205ENST00000479782 TNKSO95271 1327 aa16.67■□□□□ 0.26
RPP40-205ENST00000479782 GREB1LQ9C091 1923 aaPredicted RBP16.66■□□□□ 0.26
RPP40-205ENST00000479782 POTECB2RU33 542 aa16.66■□□□□ 0.26
RPP40-205ENST00000479782 MAP3K10Q02779 954 aa16.66■□□□□ 0.26
RPP40-205ENST00000479782 WTAPQ15007 396 aa16.66■□□□□ 0.26
RPP40-205ENST00000479782 NEDD1Q8NHV4 660 aa16.66■□□□□ 0.26
RPP40-205ENST00000479782 ZNF274Q96GC6 653 aaPredicted RBP16.66■□□□□ 0.26
RPP40-205ENST00000479782 TMX3Q96JJ7 454 aa16.66■□□□□ 0.26
RPP40-205ENST00000479782 LY9Q9HBG7 655 aa16.66■□□□□ 0.26
RPP40-205ENST00000479782 APOBRQ0VD83 1088 aa16.65■□□□□ 0.26
RPP40-205ENST00000479782 SEC23AQ15436 765 aa16.65■□□□□ 0.26
RPP40-205ENST00000479782 CERKLQ49MI3 558 aaPredicted RBP16.65■□□□□ 0.26
RPP40-205ENST00000479782 PPP4R3BQ5MIZ7 849 aa16.65■□□□□ 0.26
RPP40-205ENST00000479782 ZKSCAN3Q9BRR0 538 aa16.65■□□□□ 0.26
RPP40-205ENST00000479782 TPCN1Q9ULQ1 816 aa16.65■□□□□ 0.26
RPP40-205ENST00000479782 SRCAPQ6ZRS2 3230 aa16.64■□□□□ 0.25
RPP40-205ENST00000479782 CCDC69A6NI79 296 aa16.64■□□□□ 0.25
RPP40-205ENST00000479782 ME3Q16798 604 aa16.64■□□□□ 0.25
RPP40-205ENST00000479782 IFIT1BQ5T764 474 aaKnown RBP16.64■□□□□ 0.25
RPP40-205ENST00000479782 DCAF15Q66K64 600 aa16.64■□□□□ 0.25
RPP40-205ENST00000479782 NFXL1Q6ZNB6 911 aa16.64■□□□□ 0.25
RPP40-205ENST00000479782 DGKHQ86XP1 1220 aa16.64■□□□□ 0.25
RPP40-205ENST00000479782 SULF1Q8IWU6 871 aa16.64■□□□□ 0.25
RPP40-205ENST00000479782 ENAHQ8N8S7 591 aaPredicted RBP16.64■□□□□ 0.25
RPP40-205ENST00000479782 CHMP4CQ96CF2 233 aa16.64■□□□□ 0.25
RPP40-205ENST00000479782 KLF18A0A0U1RQI7 1052 aa16.63■□□□□ 0.25
RPP40-205ENST00000479782 FAM196BA6NMK8 535 aa16.63■□□□□ 0.25
RPP40-205ENST00000479782 HSP90AA1P07900 732 aaKnown RBP16.63■□□□□ 0.25
RPP40-205ENST00000479782 RCAN1P53805 252 aa16.63■□□□□ 0.25
RPP40-205ENST00000479782 CUL4AQ13619 759 aa16.63■□□□□ 0.25
RPP40-205ENST00000479782 ANKS1AQ92625 1134 aa16.63■□□□□ 0.25
RPP40-205ENST00000479782 LARP6Q9BRS8 491 aaKnown RBP16.63■□□□□ 0.25
RPP40-205ENST00000479782 GPHNQ9NQX3 736 aaPredicted RBP16.63■□□□□ 0.25
RPP40-205ENST00000479782 IL17RBQ9NRM6 502 aa16.63■□□□□ 0.25
RPP40-205ENST00000479782 IGKV6D-41A0A0C4DH26 115 aa16.62■□□□□ 0.25
RPP40-205ENST00000479782 PFKFB2O60825 505 aa16.62■□□□□ 0.25
RPP40-205ENST00000479782 AKR1B1P15121 316 aa16.62■□□□□ 0.25
RPP40-205ENST00000479782 VEGFAP15692 232 aaPredicted RBP16.62■□□□□ 0.25
RPP40-205ENST00000479782 PDIA3P30101 505 aaKnown RBP16.62■□□□□ 0.25
RPP40-205ENST00000479782 SUPT20HL1Q3ZLR7 823 aa16.62■□□□□ 0.25
RPP40-205ENST00000479782 EAPPQ56P03 285 aaPredicted RBP16.62■□□□□ 0.25
RPP40-205ENST00000479782 APOA5Q6Q788 366 aa16.62■□□□□ 0.25
RPP40-205ENST00000479782 SYNE3Q6ZMZ3 975 aa16.62■□□□□ 0.25
RPP40-205ENST00000479782 TMEM179Q6ZVK1 233 aa16.62■□□□□ 0.25
RPP40-205ENST00000479782 CDAN1Q8IWY9 1227 aa16.62■□□□□ 0.25
RPP40-205ENST00000479782 INTS4Q96HW7 963 aaKnown RBP16.62■□□□□ 0.25
RPP40-205ENST00000479782 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
RPP40-205ENST00000479782 BRPF3Q9ULD4 1205 aa16.62■□□□□ 0.25
RPP40-205ENST00000479782 SCAF8Q9UPN6 1271 aaKnown RBP16.62■□□□□ 0.25
RPP40-205ENST00000479782 SLC12A7Q9Y666 1083 aa16.62■□□□□ 0.25
RPP40-205ENST00000479782 UTRNP46939 3433 aa16.61■□□□□ 0.25
RPP40-205ENST00000479782 MPHOSPH10O00566 681 aaKnown RBP16.61■□□□□ 0.25
RPP40-205ENST00000479782 NMT2O60551 498 aa16.61■□□□□ 0.25
RPP40-205ENST00000479782 LARGE1O95461 756 aa16.61■□□□□ 0.25
RPP40-205ENST00000479782 NOVP48745 357 aa16.61■□□□□ 0.25
RPP40-205ENST00000479782 ABCB5Q2M3G0 1257 aa16.61■□□□□ 0.25
RPP40-205ENST00000479782 NBPF12Q5TAG4 269 aaPredicted RBP16.61■□□□□ 0.25
RPP40-205ENST00000479782 RCSD1Q6JBY9 416 aa16.61■□□□□ 0.25
RPP40-205ENST00000479782 KRT26Q7Z3Y9 468 aa16.61■□□□□ 0.25
RPP40-205ENST00000479782 GTF3C6Q969F1 213 aa16.61■□□□□ 0.25
RPP40-205ENST00000479782 CABP5Q9NP86 173 aa16.61■□□□□ 0.25
RPP40-205ENST00000479782 NID2Q14112 1375 aa16.61■□□□□ 0.25
RPP40-205ENST00000479782 GOLGA8BA8MQT2 603 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 CALM1P0DP23 149 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 CALM2P0DP24 149 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 CALM3P0DP25 149 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 SLURP2P0DP57 97 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 SLC4A3P48751 1232 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 MIGA2Q7L4E1 593 aa16.6■□□□□ 0.25
RPP40-205ENST00000479782 CATIPQ7Z7H3 387 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms