RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CRKLP46109 303 aaKnown RBP28.17■■■□□ 2.1
SYNGAP1-206ENST00000479510 AKAP17AQ02040 695 aaKnown RBP28.17■■■□□ 2.1
SYNGAP1-206ENST00000479510 ZKSCAN3Q9BRR0 538 aa28.17■■■□□ 2.1
SYNGAP1-206ENST00000479510 AATFQ9NY61 560 aaKnown RBP eCLIP28.17■■■□□ 2.1
SYNGAP1-206ENST00000479510 SERTAD1Q9UHV2 236 aa28.17■■■□□ 2.1
SYNGAP1-206ENST00000479510 PCDHB6Q9Y5E3 794 aa28.17■■■□□ 2.1
SYNGAP1-206ENST00000479510 MAGEB6P1A0A0J9YX57 407 aa28.17■■■□□ 2.1
SYNGAP1-206ENST00000479510 ACTN4O43707 911 aaKnown RBP28.17■■■□□ 2.1
SYNGAP1-206ENST00000479510 KMT5BQ4FZB7 885 aa28.17■■■□□ 2.1
SYNGAP1-206ENST00000479510 HOMER1Q86YM7 354 aa28.17■■■□□ 2.1
SYNGAP1-206ENST00000479510 NUTM2AQ8IVF1 878 aaPredicted RBP28.17■■■□□ 2.1
SYNGAP1-206ENST00000479510 PRDM10Q9NQV6 1147 aa28.17■■■□□ 2.1
SYNGAP1-206ENST00000479510 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.17■■■□□ 2.11e-6■■■■■ 26.9
SYNGAP1-206ENST00000479510 RBM28Q9NW13 759 aaKnown RBP28.16■■■□□ 2.1
SYNGAP1-206ENST00000479510 FOXN1O15353 648 aa28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 ELF2Q15723 593 aa28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 MIGA1Q8NAN2 632 aa28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 BRIP1Q9BX63 1249 aa28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 INTS13Q9NVM9 706 aa28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 TNKSO95271 1327 aa28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 TRIM75PA6NK02 468 aa28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 PRPF3O43395 683 aaKnown RBP28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 CALM1P0DP23 149 aa28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 CALM2P0DP24 149 aa28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 CALM3P0DP25 149 aa28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 GABPB1Q06547 395 aaPredicted RBP28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 NR5A1Q13285 461 aa28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 TMEM139Q8IV31 216 aa28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 NUP133Q8WUM0 1156 aa28.15■■■□□ 2.1
SYNGAP1-206ENST00000479510 STX10O60499 249 aa28.14■■■□□ 2.1
SYNGAP1-206ENST00000479510 PLCD1P51178 756 aa28.14■■■□□ 2.1
SYNGAP1-206ENST00000479510 UBE4AQ14139 1066 aa28.14■■■□□ 2.1
SYNGAP1-206ENST00000479510 FAM53CQ9NYF3 392 aa28.14■■■□□ 2.1
SYNGAP1-206ENST00000479510 NFE2L3Q9Y4A8 694 aa28.14■■■□□ 2.1
SYNGAP1-206ENST00000479510 FGRP09769 529 aa28.14■■■□□ 2.09
SYNGAP1-206ENST00000479510 GRIN1Q05586 938 aa28.14■■■□□ 2.09
SYNGAP1-206ENST00000479510 SPECC1Q5M775 1068 aa28.14■■■□□ 2.09
SYNGAP1-206ENST00000479510 SPECC1LQ69YQ0 1117 aa28.14■■■□□ 2.09
SYNGAP1-206ENST00000479510 TRIM65Q6PJ69 517 aa28.14■■■□□ 2.09
SYNGAP1-206ENST00000479510 REXO1L1PQ8IX06 675 aa28.14■■■□□ 2.09
SYNGAP1-206ENST00000479510 FERMT2Q96AC1 680 aa28.14■■■□□ 2.09
SYNGAP1-206ENST00000479510 TAOK2Q9UL54 1235 aa28.14■■■□□ 2.09
SYNGAP1-206ENST00000479510 NIP7Q9Y221 180 aaKnown RBP eCLIP28.14■■■□□ 2.09
SYNGAP1-206ENST00000479510 TMEM232C9JQI7 657 aa28.13■■■□□ 2.09
SYNGAP1-206ENST00000479510 ATP6V1AP38606 617 aa28.13■■■□□ 2.09
SYNGAP1-206ENST00000479510 FBXO38Q6PIJ6 1188 aa28.13■■■□□ 2.09
SYNGAP1-206ENST00000479510 ZSCAN10Q96SZ4 725 aaPredicted RBP28.13■■■□□ 2.09
SYNGAP1-206ENST00000479510 RIOK1Q9BRS2 568 aaKnown RBP28.13■■■□□ 2.09
SYNGAP1-206ENST00000479510 PHF20Q9BVI0 1012 aa28.13■■■□□ 2.09
SYNGAP1-206ENST00000479510 BCL11BQ9C0K0 894 aaPredicted RBP28.13■■■□□ 2.09
SYNGAP1-206ENST00000479510 CABP5Q9NP86 173 aa28.13■■■□□ 2.09
SYNGAP1-206ENST00000479510 ZNF652Q9Y2D9 606 aa28.13■■■□□ 2.09
SYNGAP1-206ENST00000479510 KRT2P35908 639 aa28.12■■■□□ 2.09
SYNGAP1-206ENST00000479510 TMED8Q6PL24 325 aaPredicted RBP28.12■■■□□ 2.09
SYNGAP1-206ENST00000479510 PRR29P0C7W0 189 aa28.12■■■□□ 2.09
SYNGAP1-206ENST00000479510 FUT2Q10981 343 aa28.12■■■□□ 2.09
SYNGAP1-206ENST00000479510 CATIPQ7Z7H3 387 aa28.12■■■□□ 2.09
SYNGAP1-206ENST00000479510 OXER1Q8TDS5 423 aa28.12■■■□□ 2.09
SYNGAP1-206ENST00000479510 CSRNP2Q9H175 543 aa28.12■■■□□ 2.09
SYNGAP1-206ENST00000479510 THRAP3Q9Y2W1 955 aaKnown RBP28.12■■■□□ 2.09
SYNGAP1-206ENST00000479510 COL16A1Q07092 1604 aaPredicted RBP28.11■■■□□ 2.09
SYNGAP1-206ENST00000479510 H2AFXP16104 143 aaPredicted RBP28.11■■■□□ 2.09
SYNGAP1-206ENST00000479510 CDK11BP21127 795 aaKnown RBP28.11■■■□□ 2.09
SYNGAP1-206ENST00000479510 FMR1Q06787 632 aaKnown RBP eCLIP28.11■■■□□ 2.09
SYNGAP1-206ENST00000479510 BAG1Q99933 345 aaPredicted RBP28.11■■■□□ 2.09
SYNGAP1-206ENST00000479510 RAI14Q9P0K7 980 aa28.11■■■□□ 2.09
SYNGAP1-206ENST00000479510 DUOX1Q9NRD9 1551 aa28.11■■■□□ 2.09
SYNGAP1-206ENST00000479510 LOC102724428A0A0B4J2F2 783 aa28.11■■■□□ 2.09
SYNGAP1-206ENST00000479510 SIK1P57059 783 aa28.11■■■□□ 2.09
SYNGAP1-206ENST00000479510 KRT222Q8N1A0 295 aa28.11■■■□□ 2.09
SYNGAP1-206ENST00000479510 ENAHQ8N8S7 591 aaPredicted RBP28.11■■■□□ 2.09
SYNGAP1-206ENST00000479510 BRMS1Q9HCU9 246 aa28.11■■■□□ 2.09
SYNGAP1-206ENST00000479510 DNAI1Q9UI46 699 aa28.11■■■□□ 2.09
SYNGAP1-206ENST00000479510 MINDY4BA8MYZ0 360 aa28.1■■■□□ 2.09
SYNGAP1-206ENST00000479510 DDAH1O94760 285 aa28.1■■■□□ 2.09
SYNGAP1-206ENST00000479510 SLFN14P0C7P3 912 aa28.1■■■□□ 2.09
SYNGAP1-206ENST00000479510 PKN1Q16512 942 aa28.1■■■□□ 2.09
SYNGAP1-206ENST00000479510 CLEC4GQ6UXB4 293 aa28.1■■■□□ 2.09
SYNGAP1-206ENST00000479510 ADGRA1Q86SQ6 560 aa28.1■■■□□ 2.09
SYNGAP1-206ENST00000479510 CCDC82Q8N4S0 544 aa28.1■■■□□ 2.09
SYNGAP1-206ENST00000479510 PPP2R2CQ9Y2T4 447 aa28.1■■■□□ 2.09
SYNGAP1-206ENST00000479510 IQCA1Q86XH1 822 aa28.09■■■□□ 2.09
SYNGAP1-206ENST00000479510 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.09■■■□□ 2.09
SYNGAP1-206ENST00000479510 V9GYY5 206 aaPredicted RBP28.09■■■□□ 2.09
SYNGAP1-206ENST00000479510 SEMA3EO15041 775 aa28.09■■■□□ 2.09
SYNGAP1-206ENST00000479510 KIF20AO95235 890 aa28.09■■■□□ 2.09
SYNGAP1-206ENST00000479510 SF3B3Q15393 1217 aaKnown RBP28.09■■■□□ 2.09
SYNGAP1-206ENST00000479510 SH3RF1Q7Z6J0 888 aa28.09■■■□□ 2.09
SYNGAP1-206ENST00000479510 SDR42E1Q8WUS8 393 aa28.09■■■□□ 2.09
SYNGAP1-206ENST00000479510 KAT6BQ8WYB5 2073 aa28.08■■■□□ 2.09
SYNGAP1-206ENST00000479510 MYH6P13533 1939 aa28.08■■■□□ 2.09
SYNGAP1-206ENST00000479510 RGL2O15211 777 aa28.08■■■□□ 2.09
SYNGAP1-206ENST00000479510 TPM1P09493 284 aa28.08■■■□□ 2.09
SYNGAP1-206ENST00000479510 NR1I3Q14994 352 aa28.08■■■□□ 2.09
SYNGAP1-206ENST00000479510 IFIT1BQ5T764 474 aaKnown RBP28.08■■■□□ 2.09
SYNGAP1-206ENST00000479510 ANKRD18AQ8IVF6 992 aa28.08■■■□□ 2.09
SYNGAP1-206ENST00000479510 CMTR1Q8N1G2 835 aaKnown RBP28.08■■■□□ 2.09
SYNGAP1-206ENST00000479510 TC2NQ8N9U0 490 aa28.08■■■□□ 2.09
SYNGAP1-206ENST00000479510 DLEC1Q9Y238 1755 aa28.08■■■□□ 2.08
SYNGAP1-206ENST00000479510 A0A1B0GTH6 734 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms