RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, human

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKB-208	ENST00000479003	MICU3	Q86XE3	530 aa		31.78	■■■□□ 2.68
CHKB-208	ENST00000479003	ERCC4	Q92889	916 aa	Predicted RBP	31.78	■■■□□ 2.68
CHKB-208	ENST00000479003	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.78	■■■□□ 2.68
CHKB-208	ENST00000479003	CNNM2	Q9H8M5	875 aa		31.78	■■■□□ 2.68
CHKB-208	ENST00000479003	FAM217B	Q9NTX9	383 aa	Predicted RBP	31.78	■■■□□ 2.68
CHKB-208	ENST00000479003	CCDC88A	Q3V6T2	1871 aa		31.77	■■■□□ 2.68
CHKB-208	ENST00000479003	GOLGA8A	A7E2F4	631 aa		31.77	■■■□□ 2.68
CHKB-208	ENST00000479003	GSG1L2	A8MUP6	293 aa		31.77	■■■□□ 2.68
CHKB-208	ENST00000479003	GRIK5	Q16478	980 aa		31.77	■■■□□ 2.68
CHKB-208	ENST00000479003	NFXL1	Q6ZNB6	911 aa		31.77	■■■□□ 2.68
CHKB-208	ENST00000479003	CACTIN	Q8WUQ7	758 aa	Known RBP	31.77	■■■□□ 2.68
CHKB-208	ENST00000479003	RIOK1	Q9BRS2	568 aa	Known RBP	31.77	■■■□□ 2.68
CHKB-208	ENST00000479003	PHKB	Q93100	1093 aa		31.76	■■■□□ 2.68
CHKB-208	ENST00000479003	INCENP	Q9NQS7	918 aa		31.76	■■■□□ 2.68
CHKB-208	ENST00000479003	MAGEB6P1	A0A0J9YX57	407 aa		31.76	■■■□□ 2.67
CHKB-208	ENST00000479003	ZNF202	O95125	648 aa		31.76	■■■□□ 2.67
CHKB-208	ENST00000479003	CTDSPL2	Q05D32	466 aa		31.76	■■■□□ 2.67
CHKB-208	ENST00000479003	BPIFA3	Q9BQP9	254 aa		31.76	■■■□□ 2.67
CHKB-208	ENST00000479003	ZSWIM5	Q9P217	1185 aa		31.76	■■■□□ 2.67
CHKB-208	ENST00000479003	SLC4A4	Q9Y6R1	1079 aa		31.76	■■■□□ 2.67
CHKB-208	ENST00000479003	DLEC1	Q9Y238	1755 aa		31.76	■■■□□ 2.67
CHKB-208	ENST00000479003	STK36	Q9NRP7	1315 aa		31.75	■■■□□ 2.67
CHKB-208	ENST00000479003	GNAT2	P19087	354 aa		31.75	■■■□□ 2.67
CHKB-208	ENST00000479003	IARS	P41252	1262 aa	Known RBP	31.75	■■■□□ 2.67
CHKB-208	ENST00000479003	R3HDM1	Q15032	1099 aa	Known RBP	31.75	■■■□□ 2.67
CHKB-208	ENST00000479003	AKNAD1	Q5T1N1	836 aa		31.75	■■■□□ 2.67
CHKB-208	ENST00000479003	AOPEP	Q8N6M6	819 aa		31.75	■■■□□ 2.67
CHKB-208	ENST00000479003	KRT23	Q9C075	422 aa		31.75	■■■□□ 2.67
CHKB-208	ENST00000479003	ATF5	Q9Y2D1	282 aa	Predicted RBP	31.75	■■■□□ 2.67
CHKB-208	ENST00000479003	TACC3	Q9Y6A5	838 aa		31.75	■■■□□ 2.67
CHKB-208	ENST00000479003	NID2	Q14112	1375 aa		31.75	■■■□□ 2.67
CHKB-208	ENST00000479003	DYNLL1	P63167	89 aa	Known RBP	31.75	■■■□□ 2.67
CHKB-208	ENST00000479003	MTERF4	Q7Z6M4	381 aa	Known RBP	31.75	■■■□□ 2.67
CHKB-208	ENST00000479003	C7orf43	Q8WVR3	580 aa		31.75	■■■□□ 2.67
CHKB-208	ENST00000479003	ZC3H12C	Q9C0D7	883 aa	Known RBP	31.75	■■■□□ 2.67
CHKB-208	ENST00000479003	RANBP6	O60518	1105 aa	Known RBP	31.74	■■■□□ 2.67
CHKB-208	ENST00000479003	PPP6R2	O75170	966 aa		31.74	■■■□□ 2.67
CHKB-208	ENST00000479003	WDHD1	O75717	1129 aa	Predicted RBP	31.74	■■■□□ 2.67
CHKB-208	ENST00000479003	PFKFB1	P16118	471 aa		31.74	■■■□□ 2.67
CHKB-208	ENST00000479003	SPTY2D1	Q68D10	685 aa	Predicted RBP	31.74	■■■□□ 2.67
CHKB-208	ENST00000479003	DZIP1	Q86YF9	867 aa	Known RBP	31.74	■■■□□ 2.67
CHKB-208	ENST00000479003	IFIT3	O14879	490 aa	Known RBP	31.73	■■■□□ 2.67
CHKB-208	ENST00000479003	LDHB	P07195	334 aa	Known RBP	31.73	■■■□□ 2.67
CHKB-208	ENST00000479003	U2AF2	P26368	475 aa	Known RBP eCLIP	31.73	■■■□□ 2.67	1e-6	■■□□□ 13.5
CHKB-208	ENST00000479003	COA1	Q9GZY4	146 aa		31.73	■■■□□ 2.67
CHKB-208	ENST00000479003	SLC12A7	Q9Y666	1083 aa		31.73	■■■□□ 2.67
CHKB-208	ENST00000479003	MROH7-TTC4	A0A0A0MT08	1334 aa		31.73	■■■□□ 2.67
CHKB-208	ENST00000479003	NEMF	O60524	1076 aa		31.72	■■■□□ 2.67
CHKB-208	ENST00000479003	SLC3A2	P08195	630 aa	Known RBP	31.72	■■■□□ 2.67
CHKB-208	ENST00000479003	SDR42E1	Q8WUS8	393 aa		31.72	■■■□□ 2.67
CHKB-208	ENST00000479003	STAG1	Q8WVM7	1258 aa		31.72	■■■□□ 2.67
CHKB-208	ENST00000479003	TIGD1	Q96MW7	591 aa		31.72	■■■□□ 2.67
CHKB-208	ENST00000479003	CCDC69	A6NI79	296 aa		31.72	■■■□□ 2.67
CHKB-208	ENST00000479003	PTPA	Q15257	358 aa		31.72	■■■□□ 2.67
CHKB-208	ENST00000479003	MFSD6	Q6ZSS7	791 aa		31.72	■■■□□ 2.67
CHKB-208	ENST00000479003	LRRC8A	Q8IWT6	810 aa		31.72	■■■□□ 2.67
CHKB-208	ENST00000479003	MYL10	Q9BUA6	226 aa		31.72	■■■□□ 2.67
CHKB-208	ENST00000479003	NACAP1	Q9BZK3	213 aa		31.72	■■■□□ 2.67
CHKB-208	ENST00000479003	KIF13B	Q9NQT8	1826 aa		31.72	■■■□□ 2.67
CHKB-208	ENST00000479003	ZRSR1	Q15695	479 aa	Known RBP	31.71	■■■□□ 2.67
CHKB-208	ENST00000479003	DPCR1	Q3MIW9	517 aa		31.71	■■■□□ 2.67
CHKB-208	ENST00000479003	JMY	Q8N9B5	988 aa		31.71	■■■□□ 2.67
CHKB-208	ENST00000479003	MAP3K14	Q99558	947 aa		31.71	■■■□□ 2.67
CHKB-208	ENST00000479003	MTFR1L	Q9H019	292 aa		31.71	■■■□□ 2.67
CHKB-208	ENST00000479003	SNED1	Q8TER0	1413 aa		31.71	■■■□□ 2.67
CHKB-208	ENST00000479003	MARCKS	P29966	332 aa	Predicted RBP	31.7	■■■□□ 2.67
CHKB-208	ENST00000479003	NLRP12	P59046	1061 aa		31.7	■■■□□ 2.67
CHKB-208	ENST00000479003	TRIM29	Q14134	588 aa		31.7	■■■□□ 2.67
CHKB-208	ENST00000479003	DOK7	Q18PE1	504 aa		31.7	■■■□□ 2.67
CHKB-208	ENST00000479003	AATF	Q9NY61	560 aa	Known RBP eCLIP	31.7	■■■□□ 2.67
CHKB-208	ENST00000479003	FMNL1	O95466	1100 aa	Predicted RBP	31.7	■■■□□ 2.66
CHKB-208	ENST00000479003	DPEP1	P16444	411 aa		31.7	■■■□□ 2.66
CHKB-208	ENST00000479003	SSRP1	Q08945	709 aa	Known RBP	31.7	■■■□□ 2.66
CHKB-208	ENST00000479003	GNL2	Q13823	731 aa	Known RBP	31.7	■■■□□ 2.66
CHKB-208	ENST00000479003	HPSE	Q9Y251	543 aa		31.7	■■■□□ 2.66
CHKB-208	ENST00000479003	KIAA1551	Q9HCM1	1747 aa		31.7	■■■□□ 2.66
CHKB-208	ENST00000479003	KCNA3	P22001	575 aa		31.69	■■■□□ 2.66
CHKB-208	ENST00000479003	DIXDC1	Q155Q3	683 aa		31.69	■■■□□ 2.66
CHKB-208	ENST00000479003	MFSD14B	Q5SR56	506 aa		31.69	■■■□□ 2.66
CHKB-208	ENST00000479003	MTA3	Q9BTC8	594 aa		31.69	■■■□□ 2.66
CHKB-208	ENST00000479003	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	31.69	■■■□□ 2.66
CHKB-208	ENST00000479003	FAM237A	A0A1B0GTK4	181 aa		31.69	■■■□□ 2.66
CHKB-208	ENST00000479003	IFNAR1	P17181	557 aa		31.69	■■■□□ 2.66
CHKB-208	ENST00000479003	TDO2	P48775	406 aa		31.69	■■■□□ 2.66
CHKB-208	ENST00000479003	FBXW7	Q969H0	707 aa		31.69	■■■□□ 2.66
CHKB-208	ENST00000479003	GTF2I	P78347	998 aa		31.68	■■■□□ 2.66
CHKB-208	ENST00000479003	EYA3	Q99504	573 aa		31.68	■■■□□ 2.66
CHKB-208	ENST00000479003	C21orf2	O43822	256 aa		31.67	■■■□□ 2.66
CHKB-208	ENST00000479003	SLC26A6	Q9BXS9	759 aa		31.67	■■■□□ 2.66
CHKB-208	ENST00000479003	FAM205A	Q6ZU69	1335 aa		31.67	■■■□□ 2.66
CHKB-208	ENST00000479003	TTLL6	Q8N841	843 aa		31.67	■■■□□ 2.66
CHKB-208	ENST00000479003	WASF1	Q92558	559 aa		31.67	■■■□□ 2.66
CHKB-208	ENST00000479003	SYK	P43405	635 aa		31.66	■■■□□ 2.66
CHKB-208	ENST00000479003	RTFDC1	Q9BY42	306 aa	Predicted RBP	31.66	■■■□□ 2.66
CHKB-208	ENST00000479003	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	31.66	■■■□□ 2.66
CHKB-208	ENST00000479003	RIOK3	O14730	519 aa	Known RBP	31.66	■■■□□ 2.66
CHKB-208	ENST00000479003	SART3	Q15020	963 aa	Known RBP	31.66	■■■□□ 2.66
CHKB-208	ENST00000479003	TMED8	Q6PL24	325 aa	Predicted RBP	31.66	■■■□□ 2.66
CHKB-208	ENST00000479003	SHC4	Q6S5L8	630 aa		31.66	■■■□□ 2.66
CHKB-208	ENST00000479003	DBNDD1	Q9H9R9	158 aa		31.65	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms