RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 USP17L4A6NCW7 530 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 G3V3G9 751 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 H0YIN7 160 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 FGRP09769 529 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 VEGFAP15692 232 aaPredicted RBP4.79□□□□□ -1.64
USP25-208ENST00000478932 MARCKSP29966 332 aaPredicted RBP4.79□□□□□ -1.64
USP25-208ENST00000478932 BTDP43251 543 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 CENPFP49454 3210 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 PDE4BQ07343 736 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 SSRP1Q08945 709 aaKnown RBP4.79□□□□□ -1.64
USP25-208ENST00000478932 SLC15A2Q16348 729 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 DCAF8Q5TAQ9 597 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 MYSM1Q5VVJ2 828 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 RCSD1Q6JBY9 416 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 USP17L1Q7RTZ2 530 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 C2CD5Q86YS7 1000 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 TRIM22Q8IYM9 498 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 MASTLQ96GX5 879 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 CAMKK2Q96RR4 588 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 RTFDC1Q9BY42 306 aaPredicted RBP4.79□□□□□ -1.64
USP25-208ENST00000478932 TMX4Q9H1E5 349 aaPredicted RBP4.79□□□□□ -1.64
USP25-208ENST00000478932 TSPY26PQ9H489 355 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 IL17RBQ9NRM6 502 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 PCDHA7Q9UN72 937 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 STX8Q9UNK0 236 aa4.79□□□□□ -1.64
USP25-208ENST00000478932 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.79□□□□□ -1.64
USP25-208ENST00000478932 A0A087WWV3 80 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 GPR75-ASB3A0A0A6YYF3 556 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 CCDC196A0A1B0GTZ2 297 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 A0A1B0GVL5 298 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 PLEKHA8P1O95397 391 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 FMNL1O95466 1100 aaPredicted RBP4.78□□□□□ -1.64
USP25-208ENST00000478932 LDHCP07864 332 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 SLURP2P0DP57 97 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 ATP2B1P20020 1258 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 RHBDL3P58872 404 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 PPP4CP60510 307 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 GSTO1P78417 241 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 PLCB2Q00722 1185 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 NR5A1Q13285 461 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 PICALMQ13492 652 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 TRIM29Q14134 588 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 SF3A1Q15459 793 aaKnown RBP4.78□□□□□ -1.64
USP25-208ENST00000478932 CATIPQ7Z7H3 387 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 NBPF11Q86T75 865 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 CCAR1Q8IX12 1150 aaKnown RBP4.78□□□□□ -1.64
USP25-208ENST00000478932 TEX11Q8IYF3 940 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 LINC00301Q8NCQ3 95 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 ANP32BQ92688 251 aaKnown RBP4.78□□□□□ -1.64
USP25-208ENST00000478932 ZNF396Q96N95 335 aaPredicted RBP4.78□□□□□ -1.64
USP25-208ENST00000478932 NOL10Q9BSC4 688 aaKnown RBP4.78□□□□□ -1.64
USP25-208ENST00000478932 NUP62CLQ9H1M0 184 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 TNMDQ9H2S6 317 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 ARPP21Q9UBL0 812 aaPredicted RBP4.78□□□□□ -1.64
USP25-208ENST00000478932 TTF2Q9UNY4 1162 aaKnown RBP4.78□□□□□ -1.64
USP25-208ENST00000478932 CHD4Q14839 1912 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 MROH7-TTC4A0A0A0MT08 1334 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 ORC4O43929 436 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 SLC3A2P08195 630 aaKnown RBP4.78□□□□□ -1.64
USP25-208ENST00000478932 HMGB2P26583 209 aaKnown RBP4.78□□□□□ -1.64
USP25-208ENST00000478932 SNW1Q13573 536 aaKnown RBP4.78□□□□□ -1.64
USP25-208ENST00000478932 STK38Q15208 465 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 SBK1Q52WX2 424 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 BRAPQ7Z569 592 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 KIAA0825Q8IV33 1275 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 DIS3L2Q8IYB7 885 aaKnown RBP4.78□□□□□ -1.64
USP25-208ENST00000478932 ZNF444Q8N0Y2 327 aaPredicted RBP4.78□□□□□ -1.64
USP25-208ENST00000478932 OXER1Q8TDS5 423 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 COA1Q9GZY4 146 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 GOLPH3LQ9H4A5 285 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 RTEL1Q9NZ71 1219 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 VPS54Q9P1Q0 977 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 PCDHAC2Q9Y5I4 1007 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 A0A1B0GUL6 1792 aa4.78□□□□□ -1.64
USP25-208ENST00000478932 SPTLC2O15270 562 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 WDHD1O75717 1129 aaPredicted RBP4.77□□□□□ -1.65
USP25-208ENST00000478932 TSPY3P0CV98 308 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 TSPY8P0CW00 308 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 PCP11498 1178 aaKnown RBP4.77□□□□□ -1.65
USP25-208ENST00000478932 U2AF2P26368 475 aaKnown RBP eCLIP4.77□□□□□ -1.652e-14■■■■□ 20.8
USP25-208ENST00000478932 NDUFA8P51970 172 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 CACNB3P54284 484 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 FUT2Q10981 343 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 PKN1Q16512 942 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 MAP3K11Q16584 847 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 ANO1Q5XXA6 986 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 RASGRP2Q7LDG7 609 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 TMC4Q7Z404 712 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 STAG2Q8N3U4 1231 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 SRBD1Q8N5C6 995 aaKnown RBP4.77□□□□□ -1.65
USP25-208ENST00000478932 TBC1D22AQ8WUA7 517 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 SHISA4Q96DD7 197 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.77□□□□□ -1.65
USP25-208ENST00000478932 CPVLQ9H3G5 476 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 DAGLAQ9Y4D2 1042 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 FLT1P17948 1338 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 FAM205CA6NFA0 338 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 C21orf2O43822 256 aa4.77□□□□□ -1.65
USP25-208ENST00000478932 LETM1O95202 739 aaPredicted RBP4.77□□□□□ -1.65
USP25-208ENST00000478932 DEXIO95424 95 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms