RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 GUCY1A2P33402 732 aa22.7■■□□□ 1.22
SREBF1-212ENST00000478616 LACTBP83111 547 aaPredicted RBP22.7■■□□□ 1.22
SREBF1-212ENST00000478616 GADL1Q6ZQY3 521 aa22.7■■□□□ 1.22
SREBF1-212ENST00000478616 SERPINB13Q9UIV8 391 aa22.7■■□□□ 1.22
SREBF1-212ENST00000478616 RBBP6Q7Z6E9 1792 aaKnown RBP22.69■■□□□ 1.22
SREBF1-212ENST00000478616 IGHDP01880 384 aa22.69■■□□□ 1.22
SREBF1-212ENST00000478616 HLA-DOAP06340 250 aa22.69■■□□□ 1.22
SREBF1-212ENST00000478616 HMGCS2P54868 508 aa22.69■■□□□ 1.22
SREBF1-212ENST00000478616 FASTKD5Q7L8L6 764 aaKnown RBP22.69■■□□□ 1.22
SREBF1-212ENST00000478616 CRACR2BQ8N4Y2 399 aaPredicted RBP22.69■■□□□ 1.22
SREBF1-212ENST00000478616 SLC44A5Q8NCS7 719 aa22.69■■□□□ 1.22
SREBF1-212ENST00000478616 OSBP2Q969R2 916 aa22.69■■□□□ 1.22
SREBF1-212ENST00000478616 CRNKL1Q9BZJ0 848 aaKnown RBP22.69■■□□□ 1.22
SREBF1-212ENST00000478616 EFCC1Q9HA90 598 aa22.69■■□□□ 1.22
SREBF1-212ENST00000478616 AGTPBP1Q9UPW5 1226 aa22.69■■□□□ 1.22
SREBF1-212ENST00000478616 SLC45A1Q9Y2W3 748 aa22.69■■□□□ 1.22
SREBF1-212ENST00000478616 BRCA2P51587 3418 aa22.69■■□□□ 1.22
SREBF1-212ENST00000478616 TTC41PQ6P2S7 1318 aa22.68■■□□□ 1.22
SREBF1-212ENST00000478616 CYP2D7A0A087X1C5 515 aa22.68■■□□□ 1.22
SREBF1-212ENST00000478616 SUPT16HQ9Y5B9 1047 aaKnown RBP22.68■■□□□ 1.22
SREBF1-212ENST00000478616 GREB1LQ9C091 1923 aaPredicted RBP22.68■■□□□ 1.22
SREBF1-212ENST00000478616 TNRC18O15417 2968 aaPredicted RBP22.67■■□□□ 1.22
SREBF1-212ENST00000478616 GH2P01242 217 aa22.67■■□□□ 1.22
SREBF1-212ENST00000478616 ASNSP08243 561 aa22.67■■□□□ 1.22
SREBF1-212ENST00000478616 POTEEQ6S8J3 1075 aa22.67■■□□□ 1.22
SREBF1-212ENST00000478616 SMC5Q8IY18 1101 aa22.67■■□□□ 1.22
SREBF1-212ENST00000478616 PROCA1Q8NCQ7 364 aaPredicted RBP22.67■■□□□ 1.22
SREBF1-212ENST00000478616 DYNLL2Q96FJ2 89 aa22.67■■□□□ 1.22
SREBF1-212ENST00000478616 TRIM47Q96LD4 638 aa22.67■■□□□ 1.22
SREBF1-212ENST00000478616 MCM9Q9NXL9 1143 aa22.67■■□□□ 1.22
SREBF1-212ENST00000478616 PLXNB2O15031 1838 aa22.66■■□□□ 1.22
SREBF1-212ENST00000478616 SOX10P56693 466 aa22.66■■□□□ 1.22
SREBF1-212ENST00000478616 BACE1P56817 501 aa22.66■■□□□ 1.22
SREBF1-212ENST00000478616 MTMR2Q13614 643 aa22.66■■□□□ 1.22
SREBF1-212ENST00000478616 ANKRD45Q5TZF3 282 aa22.66■■□□□ 1.22
SREBF1-212ENST00000478616 TTC6Q86TZ1 520 aa22.66■■□□□ 1.22
SREBF1-212ENST00000478616 STRBPQ96SI9 672 aaKnown RBP22.66■■□□□ 1.22
SREBF1-212ENST00000478616 PARK7Q99497 189 aaKnown RBP22.66■■□□□ 1.22
SREBF1-212ENST00000478616 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.66■■□□□ 1.222e-9■■■■■ 28.3
SREBF1-212ENST00000478616 RLFQ13129 1914 aa22.66■■□□□ 1.22
SREBF1-212ENST00000478616 KIAA0100Q14667 2235 aaKnown RBP22.66■■□□□ 1.22
SREBF1-212ENST00000478616 M0R2C6 588 aa22.65■■□□□ 1.22
SREBF1-212ENST00000478616 ECM2O94769 699 aaPredicted RBP22.65■■□□□ 1.22
SREBF1-212ENST00000478616 MX1P20591 662 aa22.65■■□□□ 1.22
SREBF1-212ENST00000478616 TBC1D2Q9BYX2 928 aa22.65■■□□□ 1.22
SREBF1-212ENST00000478616 EMILIN3Q9NT22 766 aa22.65■■□□□ 1.22
SREBF1-212ENST00000478616 GINM1Q9NU53 330 aa22.65■■□□□ 1.22
SREBF1-212ENST00000478616 STAP2Q9UGK3 403 aa22.65■■□□□ 1.22
SREBF1-212ENST00000478616 PTCH2Q9Y6C5 1203 aa22.65■■□□□ 1.22
SREBF1-212ENST00000478616 C12orf60Q5U649 245 aa22.64■■□□□ 1.21
SREBF1-212ENST00000478616 ACER1Q8TDN7 264 aa22.64■■□□□ 1.21
SREBF1-212ENST00000478616 GCC1Q96CN9 775 aa22.64■■□□□ 1.21
SREBF1-212ENST00000478616 SEC62Q99442 399 aaKnown RBP22.64■■□□□ 1.21
SREBF1-212ENST00000478616 GSG1L2A8MUP6 293 aa22.63■■□□□ 1.21
SREBF1-212ENST00000478616 RNF113AO15541 343 aaKnown RBP22.63■■□□□ 1.21
SREBF1-212ENST00000478616 PEX10O60683 326 aa22.63■■□□□ 1.21
SREBF1-212ENST00000478616 POLR3DP05423 398 aaPredicted RBP22.63■■□□□ 1.21
SREBF1-212ENST00000478616 APPBP2Q92624 585 aa22.63■■□□□ 1.21
SREBF1-212ENST00000478616 EPB41L4AQ9HCS5 686 aaPredicted RBP22.63■■□□□ 1.21
SREBF1-212ENST00000478616 ATP8A2Q9NTI2 1148 aa22.63■■□□□ 1.21
SREBF1-212ENST00000478616 PARP14Q460N5 1801 aa22.63■■□□□ 1.21
SREBF1-212ENST00000478616 USP17L12C9JPN9 530 aa22.62■■□□□ 1.21
SREBF1-212ENST00000478616 USP17L21D6R901 530 aa22.62■■□□□ 1.21
SREBF1-212ENST00000478616 GLRX3O76003 335 aaKnown RBP22.62■■□□□ 1.21
SREBF1-212ENST00000478616 PDE1AP54750 535 aa22.62■■□□□ 1.21
SREBF1-212ENST00000478616 AAMPQ13685 434 aa22.62■■□□□ 1.21
SREBF1-212ENST00000478616 CERKLQ49MI3 558 aaPredicted RBP22.62■■□□□ 1.21
SREBF1-212ENST00000478616 CTR9Q6PD62 1173 aa22.62■■□□□ 1.21
SREBF1-212ENST00000478616 SIAH1Q8IUQ4 282 aa22.62■■□□□ 1.21
SREBF1-212ENST00000478616 ARMC5Q96C12 935 aa22.62■■□□□ 1.21
SREBF1-212ENST00000478616 GPATCH3Q96I76 525 aa22.62■■□□□ 1.21
SREBF1-212ENST00000478616 ASCC2Q9H1I8 757 aaPredicted RBP22.62■■□□□ 1.21
SREBF1-212ENST00000478616 AS3MTQ9HBK9 375 aa22.62■■□□□ 1.21
SREBF1-212ENST00000478616 SLC4A4Q9Y6R1 1079 aa22.62■■□□□ 1.21
SREBF1-212ENST00000478616 FOXP2O15409 715 aa22.61■■□□□ 1.21
SREBF1-212ENST00000478616 OSBPP22059 807 aa22.61■■□□□ 1.21
SREBF1-212ENST00000478616 PSMC4P43686 418 aa22.61■■□□□ 1.21
SREBF1-212ENST00000478616 ABCB5Q2M3G0 1257 aa22.61■■□□□ 1.21
SREBF1-212ENST00000478616 ZSCAN25Q6NSZ9 544 aa22.61■■□□□ 1.21
SREBF1-212ENST00000478616 TRIM34Q9BYJ4 488 aa22.61■■□□□ 1.21
SREBF1-212ENST00000478616 A0A1W2PRG0 241 aa22.6■■□□□ 1.21
SREBF1-212ENST00000478616 USP17L10C9JJH3 530 aa22.6■■□□□ 1.21
SREBF1-212ENST00000478616 HOXA7P31268 230 aaPredicted RBP22.6■■□□□ 1.21
SREBF1-212ENST00000478616 SEPT2Q15019 361 aa22.6■■□□□ 1.21
SREBF1-212ENST00000478616 CLEC10AQ8IUN9 316 aa22.6■■□□□ 1.21
SREBF1-212ENST00000478616 GPAA1O43292 621 aa22.59■■□□□ 1.21
SREBF1-212ENST00000478616 AKR1B1P15121 316 aa22.59■■□□□ 1.21
SREBF1-212ENST00000478616 KIAA1755Q5JYT7 1200 aa22.59■■□□□ 1.21
SREBF1-212ENST00000478616 C12orf42Q96LP6 360 aa22.59■■□□□ 1.21
SREBF1-212ENST00000478616 P2RX7Q99572 595 aaKnown RBP22.59■■□□□ 1.21
SREBF1-212ENST00000478616 LNPKQ9C0E8 428 aa22.59■■□□□ 1.21
SREBF1-212ENST00000478616 C19orf81C9J6K1 198 aa22.58■■□□□ 1.21
SREBF1-212ENST00000478616 ERC2O15083 957 aa22.58■■□□□ 1.21
SREBF1-212ENST00000478616 ZMYM1Q5SVZ6 1142 aa22.58■■□□□ 1.21
SREBF1-212ENST00000478616 ANKRD13CQ8N6S4 541 aa22.58■■□□□ 1.21
SREBF1-212ENST00000478616 ZNF333Q96JL9 665 aa22.58■■□□□ 1.21
SREBF1-212ENST00000478616 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.58■■□□□ 1.21
SREBF1-212ENST00000478616 TXNRD2Q9NNW7 524 aa22.58■■□□□ 1.21
SREBF1-212ENST00000478616 SRRDQ9UH36 339 aa22.58■■□□□ 1.21
SREBF1-212ENST00000478616 GABRQQ9UN88 632 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms