RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 USP17L10C9JJH3 530 aa17.55■□□□□ 0.4
SMARCE1-209ENST00000478349 IFIT2P09913 472 aaKnown RBP17.55■□□□□ 0.4
SMARCE1-209ENST00000478349 C1QBPQ07021 282 aaKnown RBP17.55■□□□□ 0.4
SMARCE1-209ENST00000478349 RHPN1Q8TCX5 695 aa17.55■□□□□ 0.4
SMARCE1-209ENST00000478349 ASCC2Q9H1I8 757 aaPredicted RBP17.55■□□□□ 0.4
SMARCE1-209ENST00000478349 EHD4Q9H223 541 aa17.55■□□□□ 0.4
SMARCE1-209ENST00000478349 TAOK2Q9UL54 1235 aa17.55■□□□□ 0.4
SMARCE1-209ENST00000478349 ZBTB21Q9ULJ3 1066 aa17.55■□□□□ 0.4
SMARCE1-209ENST00000478349 RAB11FIP3O75154 756 aa17.54■□□□□ 0.4
SMARCE1-209ENST00000478349 MTFR1Q15390 333 aa17.54■□□□□ 0.4
SMARCE1-209ENST00000478349 MIGA1Q8NAN2 632 aa17.54■□□□□ 0.4
SMARCE1-209ENST00000478349 SAP30BPQ9UHR5 308 aaKnown RBP17.54■□□□□ 0.4
SMARCE1-209ENST00000478349 SERPINB13Q9UIV8 391 aa17.54■□□□□ 0.4
SMARCE1-209ENST00000478349 HOXA7P31268 230 aaPredicted RBP17.53■□□□□ 0.4
SMARCE1-209ENST00000478349 CCAR1Q8IX12 1150 aaKnown RBP17.53■□□□□ 0.4
SMARCE1-209ENST00000478349 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.53■□□□□ 0.4
SMARCE1-209ENST00000478349 FEZ1Q99689 392 aa17.53■□□□□ 0.4
SMARCE1-209ENST00000478349 CRNKL1Q9BZJ0 848 aaKnown RBP17.53■□□□□ 0.4
SMARCE1-209ENST00000478349 GABRQQ9UN88 632 aa17.53■□□□□ 0.4
SMARCE1-209ENST00000478349 MAGEB6P1A0A0J9YX57 407 aa17.52■□□□□ 0.4
SMARCE1-209ENST00000478349 GDF11O95390 407 aa17.52■□□□□ 0.4
SMARCE1-209ENST00000478349 INHAP05111 366 aa17.52■□□□□ 0.4
SMARCE1-209ENST00000478349 USP14P54578 494 aa17.52■□□□□ 0.4
SMARCE1-209ENST00000478349 DYNLL1P63167 89 aaKnown RBP17.52■□□□□ 0.4
SMARCE1-209ENST00000478349 USP17L2Q6R6M4 530 aa17.52■□□□□ 0.4
SMARCE1-209ENST00000478349 U2AF1L4Q8WU68 220 aaKnown RBP17.52■□□□□ 0.4
SMARCE1-209ENST00000478349 SOCS4Q8WXH5 440 aa17.52■□□□□ 0.4
SMARCE1-209ENST00000478349 DNAJC18Q9H819 358 aa17.52■□□□□ 0.4
SMARCE1-209ENST00000478349 IL1RAPL2Q9NP60 686 aa17.52■□□□□ 0.4
SMARCE1-209ENST00000478349 CABP5Q9NP86 173 aa17.52■□□□□ 0.4
SMARCE1-209ENST00000478349 MORF4L1Q9UBU8 362 aa17.52■□□□□ 0.4
SMARCE1-209ENST00000478349 ZSWIM8A7E2V4 1837 aa17.51■□□□□ 0.39
SMARCE1-209ENST00000478349 LOC285556D6RIA3 1793 aa17.51■□□□□ 0.39
SMARCE1-209ENST00000478349 HMGCRP04035 888 aa17.51■□□□□ 0.39
SMARCE1-209ENST00000478349 PDE3AQ14432 1141 aa17.51■□□□□ 0.39
SMARCE1-209ENST00000478349 RRP1BQ14684 758 aaKnown RBP17.51■□□□□ 0.39
SMARCE1-209ENST00000478349 SLC9C2Q5TAH2 1124 aa17.51■□□□□ 0.39
SMARCE1-209ENST00000478349 SHISA4Q96DD7 197 aa17.51■□□□□ 0.39
SMARCE1-209ENST00000478349 RCAN3Q9UKA8 241 aa17.51■□□□□ 0.39
SMARCE1-209ENST00000478349 APBB1O00213 710 aa17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 FARP2O94887 1054 aaPredicted RBP17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 GH2P01242 217 aa17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 POLR3DP05423 398 aaPredicted RBP17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 ELNP15502 786 aa17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 MAPK4P31152 587 aa17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 HERVK_113P62684 666 aa17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 HABP4Q5JVS0 413 aaKnown RBP17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 TATDN1Q6P1N9 297 aa17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 TRMT44Q8IYL2 757 aaKnown RBP17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 GPRC5AQ8NFJ5 357 aa17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 DPF3Q92784 378 aa17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 DNAJC2Q99543 621 aaKnown RBP17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 UNC93B1Q9H1C4 597 aa17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 CWC22Q9HCG8 908 aaKnown RBP17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 ZBTB40Q9NUA8 1239 aa17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 COG6Q9Y2V7 657 aa17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 NR2E3Q9Y5X4 410 aa17.5■□□□□ 0.39
SMARCE1-209ENST00000478349 PHIPQ8WWQ0 1821 aa17.49■□□□□ 0.39
SMARCE1-209ENST00000478349 SGPL1O95470 568 aa17.49■□□□□ 0.39
SMARCE1-209ENST00000478349 ABCB5Q2M3G0 1257 aa17.49■□□□□ 0.39
SMARCE1-209ENST00000478349 CERKLQ49MI3 558 aaPredicted RBP17.49■□□□□ 0.39
SMARCE1-209ENST00000478349 AMOTL1Q8IY63 956 aa17.49■□□□□ 0.39
SMARCE1-209ENST00000478349 DDRGK1Q96HY6 314 aa17.49■□□□□ 0.39
SMARCE1-209ENST00000478349 ANTXR1Q9H6X2 564 aa17.49■□□□□ 0.39
SMARCE1-209ENST00000478349 PTPRFP10586 1907 aa17.49■□□□□ 0.39
SMARCE1-209ENST00000478349 GOLIM4O00461 696 aa17.48■□□□□ 0.39
SMARCE1-209ENST00000478349 GLRX3O76003 335 aaKnown RBP17.48■□□□□ 0.39
SMARCE1-209ENST00000478349 TFRCP02786 760 aaKnown RBP17.48■□□□□ 0.39
SMARCE1-209ENST00000478349 PDE6AP16499 860 aa17.48■□□□□ 0.39
SMARCE1-209ENST00000478349 KCNA4P22459 653 aa17.48■□□□□ 0.39
SMARCE1-209ENST00000478349 CCNA1P78396 465 aa17.48■□□□□ 0.39
SMARCE1-209ENST00000478349 RAB3GAP1Q15042 981 aa17.48■□□□□ 0.39
SMARCE1-209ENST00000478349 C12orf42Q96LP6 360 aa17.48■□□□□ 0.39
SMARCE1-209ENST00000478349 RIOK1Q9BRS2 568 aaKnown RBP17.48■□□□□ 0.39
SMARCE1-209ENST00000478349 NDUFB9Q9Y6M9 179 aa17.48■□□□□ 0.39
SMARCE1-209ENST00000478349 DEFB118Q96PH6 123 aa17.47■□□□□ 0.39
SMARCE1-209ENST00000478349 NUDT12Q9BQG2 462 aa17.47■□□□□ 0.39
SMARCE1-209ENST00000478349 KIAA1683Q9H0B3 1180 aa17.47■□□□□ 0.39
SMARCE1-209ENST00000478349 PAK6Q9NQU5 681 aaPredicted RBP17.47■□□□□ 0.39
SMARCE1-209ENST00000478349 MCM9Q9NXL9 1143 aa17.47■□□□□ 0.39
SMARCE1-209ENST00000478349 USP17L15C9J2P7 530 aa17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 USP17L13C9JLJ4 530 aa17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 USP17L11C9JVI0 530 aa17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 USP17L18D6R9N7 530 aa17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 USP17L22D6RA61 530 aa17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 USP17L17D6RBQ6 530 aa17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 USP17L19D6RCP7 530 aa17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 USP17L20D6RJB6 530 aa17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 USP17L24Q0WX57 530 aa17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 ZSCAN25Q6NSZ9 544 aa17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 P2RX7Q99572 595 aaKnown RBP17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 HMX1Q9NP08 348 aaPredicted RBP17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 PAG1Q9NWQ8 432 aa17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 SWAP70Q9UH65 585 aa17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 ATAD5Q96QE3 1844 aa17.46■□□□□ 0.39
SMARCE1-209ENST00000478349 ZNF532Q9HCE3 1301 aa17.46■□□□□ 0.38
SMARCE1-209ENST00000478349 CENPFP49454 3210 aa17.45■□□□□ 0.38
SMARCE1-209ENST00000478349 FOCADQ5VW36 1801 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms