RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 MSL3Q8N5Y2 521 aaKnown RBP16.96■□□□□ 0.31
U2AF1-210ENST00000478282 MSANTD4Q8NCY6 345 aa16.96■□□□□ 0.31
U2AF1-210ENST00000478282 CDC23Q9UJX2 597 aa16.96■□□□□ 0.31
U2AF1-210ENST00000478282 SCARF1Q14162 830 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 SPECC1Q5M775 1068 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 HDXQ7Z353 690 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 STK11IPQ8N1F8 1099 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 TRIML1Q8N9V2 468 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 XAGE2Q96GT9 111 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 TEX13AQ9BXU3 409 aaPredicted RBP16.95■□□□□ 0.3
U2AF1-210ENST00000478282 PDE11AQ9HCR9 933 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 LCMT1Q9UIC8 334 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 ADGRG1Q9Y653 693 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 A0A1B0GTH6 734 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 IARSP41252 1262 aaKnown RBP16.95■□□□□ 0.3
U2AF1-210ENST00000478282 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
U2AF1-210ENST00000478282 NTRK3Q16288 839 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 MED15Q96RN5 788 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 LZTFL1Q9NQ48 299 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 SAMSN1Q9NSI8 373 aaKnown RBP16.95■□□□□ 0.3
U2AF1-210ENST00000478282 KCNQ2O43526 872 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 ZAP70P43403 619 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 ZNF827Q17R98 1081 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 KRT27Q7Z3Y8 459 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 MICU3Q86XE3 530 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 TBC1D10CQ8IV04 446 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 NKX2-3Q8TAU0 364 aa16.95■□□□□ 0.3
U2AF1-210ENST00000478282 NAA15Q9BXJ9 866 aaKnown RBP16.95■□□□□ 0.3
U2AF1-210ENST00000478282 PUF60Q9UHX1 559 aaKnown RBP16.95■□□□□ 0.3
U2AF1-210ENST00000478282 ABCC12Q96J65 1359 aa16.94■□□□□ 0.3
U2AF1-210ENST00000478282 KIF5CO60282 957 aa16.94■□□□□ 0.3
U2AF1-210ENST00000478282 RANBP6O60518 1105 aaKnown RBP16.94■□□□□ 0.3
U2AF1-210ENST00000478282 RAD9BQ6WBX8 426 aa16.94■□□□□ 0.3
U2AF1-210ENST00000478282 SRLQ86TD4 932 aa16.94■□□□□ 0.3
U2AF1-210ENST00000478282 VPS18Q9P253 973 aa16.94■□□□□ 0.3
U2AF1-210ENST00000478282 AKAP2Q9Y2D5 859 aa16.94■□□□□ 0.3
U2AF1-210ENST00000478282 UBN2Q6ZU65 1347 aa16.94■□□□□ 0.3
U2AF1-210ENST00000478282 ERLIN1O75477 346 aa16.94■□□□□ 0.3
U2AF1-210ENST00000478282 TUBB2AQ13885 445 aa16.94■□□□□ 0.3
U2AF1-210ENST00000478282 MCM6Q14566 821 aa16.94■□□□□ 0.3
U2AF1-210ENST00000478282 TUBB2BQ9BVA1 445 aa16.94■□□□□ 0.3
U2AF1-210ENST00000478282 SERTAD1Q9UHV2 236 aa16.94■□□□□ 0.3
U2AF1-210ENST00000478282 NBPF26B4DH59 902 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 ZBTB43O43298 467 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 EIF3JO75822 258 aaKnown RBP16.93■□□□□ 0.3
U2AF1-210ENST00000478282 NBPF14Q5TI25 921 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 NBPF10Q6P3W6 841 aaKnown RBP16.93■□□□□ 0.3
U2AF1-210ENST00000478282 TTLL7Q6ZT98 887 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 NBPF15Q8N660 670 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 PNKPQ96T60 521 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 SENP2Q9HC62 589 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 POLR2DO15514 142 aaKnown RBP16.93■□□□□ 0.3
U2AF1-210ENST00000478282 PLCD1P51178 756 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 TUBB4BP68371 445 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 LEKR1Q6ZMV7 388 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 NOSTRINQ8IVI9 506 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 C10orf67Q8IYJ2 551 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 FBXO2Q9UK22 296 aaPredicted RBP16.93■□□□□ 0.3
U2AF1-210ENST00000478282 TRIM66O15016 1216 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 PTPREP23469 700 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 L1RE1Q9UN81 338 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 RRP15Q9Y3B9 282 aaKnown RBP16.93■□□□□ 0.3
U2AF1-210ENST00000478282 STK36Q9NRP7 1315 aa16.93■□□□□ 0.3
U2AF1-210ENST00000478282 GOLGA8AA7E2F4 631 aa16.92■□□□□ 0.3
U2AF1-210ENST00000478282 ERCC5P28715 1186 aaPredicted RBP16.92■□□□□ 0.3
U2AF1-210ENST00000478282 GRIN1Q05586 938 aa16.92■□□□□ 0.3
U2AF1-210ENST00000478282 TMEM87BQ96K49 555 aa16.92■□□□□ 0.3
U2AF1-210ENST00000478282 FAM217BQ9NTX9 383 aaPredicted RBP16.92■□□□□ 0.3
U2AF1-210ENST00000478282 IVLP07476 585 aa16.92■□□□□ 0.3
U2AF1-210ENST00000478282 SLC9C2Q5TAH2 1124 aa16.92■□□□□ 0.3
U2AF1-210ENST00000478282 FAM196AQ6ZSG2 479 aa16.92■□□□□ 0.3
U2AF1-210ENST00000478282 PTF1AQ7RTS3 328 aa16.92■□□□□ 0.3
U2AF1-210ENST00000478282 PPFIBP1Q86W92 1011 aa16.92■□□□□ 0.3
U2AF1-210ENST00000478282 ACSBG1Q96GR2 724 aa16.92■□□□□ 0.3
U2AF1-210ENST00000478282 A0A0U1RQJ8 604 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 TOB1P50616 345 aaPredicted RBP16.91■□□□□ 0.3
U2AF1-210ENST00000478282 APTXQ7Z2E3 356 aaKnown RBP16.91■□□□□ 0.3
U2AF1-210ENST00000478282 GRAMD1CQ8IYS0 662 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 ATRIPQ8WXE1 791 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 TEX33O43247 280 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 RBL2Q08999 1139 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 ZNF569Q5MCW4 686 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 PI16Q6UXB8 463 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 IGSF22Q8N9C0 903 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 SMARCC1Q92922 1105 aaPredicted RBP16.91■□□□□ 0.3
U2AF1-210ENST00000478282 SLC26A6Q9BXS9 759 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 ABCB6Q9NP58 842 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 RSPH14Q9UHP6 348 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 B4E1Z4 1266 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 UBE2Q2LH0YL09 131 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 NFXL1Q6ZNB6 911 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 RASGRP2Q7LDG7 609 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 SGMS1Q86VZ5 419 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 IGDCC4Q8TDY8 1250 aa16.91■□□□□ 0.3
U2AF1-210ENST00000478282 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.91■□□□□ 0.3
U2AF1-210ENST00000478282 ACTN4O43707 911 aaKnown RBP16.9■□□□□ 0.3
U2AF1-210ENST00000478282 SSRP1Q08945 709 aaKnown RBP16.9■□□□□ 0.3
U2AF1-210ENST00000478282 CCDC57Q2TAC2 916 aa16.9■□□□□ 0.3
U2AF1-210ENST00000478282 KIF4BQ2VIQ3 1234 aa16.9■□□□□ 0.3
U2AF1-210ENST00000478282 KANK3Q6NY19 840 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms