RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 MIPEPQ99797 713 aa7.88□□□□□ -1.15
LMBR1-216ENST00000477983 CTNND2Q9UQB3 1225 aa7.88□□□□□ -1.15
LMBR1-216ENST00000477983 ANKRD33BA6NCL7 494 aa7.87□□□□□ -1.15
LMBR1-216ENST00000477983 FARP2O94887 1054 aaPredicted RBP7.87□□□□□ -1.15
LMBR1-216ENST00000477983 GRK4P32298 578 aa7.87□□□□□ -1.15
LMBR1-216ENST00000477983 EAPPQ56P03 285 aaPredicted RBP7.87□□□□□ -1.15
LMBR1-216ENST00000477983 ZNF746Q6NUN9 644 aaPredicted RBP7.87□□□□□ -1.15
LMBR1-216ENST00000477983 LETMD1Q6P1Q0 360 aa7.87□□□□□ -1.15
LMBR1-216ENST00000477983 MFSD4AQ8N468 514 aa7.87□□□□□ -1.15
LMBR1-216ENST00000477983 COX4I2Q96KJ9 171 aa7.87□□□□□ -1.15
LMBR1-216ENST00000477983 TPX2Q9ULW0 747 aaKnown RBP7.87□□□□□ -1.15
LMBR1-216ENST00000477983 ST14Q9Y5Y6 855 aa7.87□□□□□ -1.15
LMBR1-216ENST00000477983 CAPN6Q9Y6Q1 641 aa7.87□□□□□ -1.15
LMBR1-216ENST00000477983 CCDC180Q9P1Z9 1646 aa7.87□□□□□ -1.15
LMBR1-216ENST00000477983 ARID1BQ8NFD5 2236 aaPredicted RBP7.86□□□□□ -1.15
LMBR1-216ENST00000477983 LIG3P49916 1009 aa7.86□□□□□ -1.15
LMBR1-216ENST00000477983 SEPT6Q14141 434 aa7.86□□□□□ -1.15
LMBR1-216ENST00000477983 ZNF648Q5T619 568 aaPredicted RBP7.86□□□□□ -1.15
LMBR1-216ENST00000477983 PRAMEF13Q5VWM6 474 aa7.86□□□□□ -1.15
LMBR1-216ENST00000477983 NPAS4Q8IUM7 802 aa7.86□□□□□ -1.15
LMBR1-216ENST00000477983 MRPL41Q8IXM3 137 aaKnown RBP7.86□□□□□ -1.15
LMBR1-216ENST00000477983 FAM155AB1AL88 458 aaPredicted RBP7.85□□□□□ -1.15
LMBR1-216ENST00000477983 RLBP1P12271 317 aa7.85□□□□□ -1.15
LMBR1-216ENST00000477983 SND1Q7KZF4 910 aaKnown RBP eCLIP7.85□□□□□ -1.15
LMBR1-216ENST00000477983 THAP5Q7Z6K1 395 aa7.85□□□□□ -1.15
LMBR1-216ENST00000477983 ZSWIM9Q86XI8 627 aa7.85□□□□□ -1.15
LMBR1-216ENST00000477983 NOC4LQ9BVI4 516 aaKnown RBP7.85□□□□□ -1.15
LMBR1-216ENST00000477983 FAM53CQ9NYF3 392 aa7.85□□□□□ -1.15
LMBR1-216ENST00000477983 TJP2Q9UDY2 1190 aa7.85□□□□□ -1.15
LMBR1-216ENST00000477983 TFE3P19532 575 aaPredicted RBP7.84□□□□□ -1.15
LMBR1-216ENST00000477983 LMNB1P20700 586 aa7.84□□□□□ -1.15
LMBR1-216ENST00000477983 KIR3DL1P43629 444 aa7.84□□□□□ -1.15
LMBR1-216ENST00000477983 AFMP43652 599 aa7.84□□□□□ -1.15
LMBR1-216ENST00000477983 DAB2P98082 770 aa7.84□□□□□ -1.15
LMBR1-216ENST00000477983 MESP2Q0VG99 397 aa7.84□□□□□ -1.15
LMBR1-216ENST00000477983 SLC6A19Q695T7 634 aa7.84□□□□□ -1.15
LMBR1-216ENST00000477983 MIR1-1HGQ9H1L0 117 aa7.84□□□□□ -1.15
LMBR1-216ENST00000477983 CARS2Q9HA77 564 aaKnown RBP7.84□□□□□ -1.15
LMBR1-216ENST00000477983 ATP13A1Q9HD20 1204 aa7.84□□□□□ -1.15
LMBR1-216ENST00000477983 ZNF503-AS2A6NEH8 195 aa7.83□□□□□ -1.16
LMBR1-216ENST00000477983 CYP7A1P22680 504 aa7.83□□□□□ -1.16
LMBR1-216ENST00000477983 ST13P50502 369 aaKnown RBP7.83□□□□□ -1.16
LMBR1-216ENST00000477983 RPL6Q02878 288 aaKnown RBP7.83□□□□□ -1.16
LMBR1-216ENST00000477983 TAF1CQ15572 869 aaPredicted RBP7.83□□□□□ -1.16
LMBR1-216ENST00000477983 TSNAXIP1Q2TAA8 658 aa7.83□□□□□ -1.16
LMBR1-216ENST00000477983 MEI1Q5TIA1 1274 aa7.83□□□□□ -1.16
LMBR1-216ENST00000477983 CDKAL1Q5VV42 579 aa7.83□□□□□ -1.16
LMBR1-216ENST00000477983 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.83□□□□□ -1.16
LMBR1-216ENST00000477983 PARP2Q9UGN5 583 aa7.83□□□□□ -1.16
LMBR1-216ENST00000477983 USP31Q70CQ4 1352 aa7.83□□□□□ -1.16
LMBR1-216ENST00000477983 H3BS24 57 aa7.82□□□□□ -1.16
LMBR1-216ENST00000477983 PGRP06401 933 aa7.82□□□□□ -1.16
LMBR1-216ENST00000477983 GDNFP39905 211 aa7.82□□□□□ -1.16
LMBR1-216ENST00000477983 KCNMB1Q16558 191 aa7.82□□□□□ -1.16
LMBR1-216ENST00000477983 CDH24Q86UP0 819 aa7.82□□□□□ -1.16
LMBR1-216ENST00000477983 CCDC84Q86UT8 332 aaPredicted RBP7.82□□□□□ -1.16
LMBR1-216ENST00000477983 MCATQ8IVS2 390 aaKnown RBP7.82□□□□□ -1.16
LMBR1-216ENST00000477983 BHLHE22Q8NFJ8 381 aaPredicted RBP7.82□□□□□ -1.16
LMBR1-216ENST00000477983 TMEM87BQ96K49 555 aa7.82□□□□□ -1.16
LMBR1-216ENST00000477983 KRTAP4-9Q9BYQ8 210 aa7.82□□□□□ -1.16
LMBR1-216ENST00000477983 C19orf73Q9NVV2 129 aa7.82□□□□□ -1.16
LMBR1-216ENST00000477983 ADAM30Q9UKF2 790 aa7.82□□□□□ -1.16
LMBR1-216ENST00000477983 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.81□□□□□ -1.16
LMBR1-216ENST00000477983 CBX7O95931 251 aa7.81□□□□□ -1.16
LMBR1-216ENST00000477983 PDE4BQ07343 736 aa7.81□□□□□ -1.16
LMBR1-216ENST00000477983 MAP3K11Q16584 847 aa7.81□□□□□ -1.16
LMBR1-216ENST00000477983 FYB2Q5VWT5 728 aa7.81□□□□□ -1.16
LMBR1-216ENST00000477983 DNAJC14Q6Y2X3 702 aaPredicted RBP7.81□□□□□ -1.16
LMBR1-216ENST00000477983 AEBP1Q8IUX7 1158 aa7.81□□□□□ -1.16
LMBR1-216ENST00000477983 PIWIL2Q8TC59 973 aaKnown RBP7.81□□□□□ -1.16
LMBR1-216ENST00000477983 XAGE3Q8WTP9 111 aa7.81□□□□□ -1.16
LMBR1-216ENST00000477983 FAM84AQ96KN4 292 aa7.81□□□□□ -1.16
LMBR1-216ENST00000477983 DBX1A6NMT0 343 aa7.8□□□□□ -1.16
LMBR1-216ENST00000477983 CTSHP09668 335 aa7.8□□□□□ -1.16
LMBR1-216ENST00000477983 PDIA4P13667 645 aaKnown RBP7.8□□□□□ -1.16
LMBR1-216ENST00000477983 TNK2Q07912 1038 aa7.8□□□□□ -1.16
LMBR1-216ENST00000477983 ZNF124Q15973 351 aa7.8□□□□□ -1.16
LMBR1-216ENST00000477983 TMC4Q7Z404 712 aa7.8□□□□□ -1.16
LMBR1-216ENST00000477983 UBE2FQ969M7 185 aa7.8□□□□□ -1.16
LMBR1-216ENST00000477983 LRRC10BA6NIK2 292 aa7.79□□□□□ -1.16
LMBR1-216ENST00000477983 PSMD2Q13200 908 aa7.79□□□□□ -1.16
LMBR1-216ENST00000477983 KSR1Q8IVT5 923 aa7.79□□□□□ -1.16
LMBR1-216ENST00000477983 PHC3Q8NDX5 983 aa7.79□□□□□ -1.16
LMBR1-216ENST00000477983 ACSF2Q96CM8 615 aaPredicted RBP7.79□□□□□ -1.16
LMBR1-216ENST00000477983 CCDC120Q96HB5 630 aa7.79□□□□□ -1.16
LMBR1-216ENST00000477983 CEP131Q9UPN4 1083 aa7.79□□□□□ -1.16
LMBR1-216ENST00000477983 TLR6Q9Y2C9 796 aa7.79□□□□□ -1.16
LMBR1-216ENST00000477983 GLI1P08151 1106 aa7.78□□□□□ -1.16
LMBR1-216ENST00000477983 ETV3P41162 512 aa7.78□□□□□ -1.16
LMBR1-216ENST00000477983 DNAJB8Q8NHS0 232 aa7.78□□□□□ -1.16
LMBR1-216ENST00000477983 KIRREL1Q96J84 757 aa7.78□□□□□ -1.16
LMBR1-216ENST00000477983 SLC38A3Q99624 504 aa7.78□□□□□ -1.16
LMBR1-216ENST00000477983 ZSWIM5Q9P217 1185 aa7.78□□□□□ -1.16
LMBR1-216ENST00000477983 RBAK-RBAKDNI3L0D1 243 aa7.77□□□□□ -1.17
LMBR1-216ENST00000477983 TMEM201Q5SNT2 666 aa7.77□□□□□ -1.17
LMBR1-216ENST00000477983 TMPRSS7Q7RTY8 843 aa7.77□□□□□ -1.17
LMBR1-216ENST00000477983 FBXO33Q7Z6M2 555 aa7.77□□□□□ -1.17
LMBR1-216ENST00000477983 PPP1R13LQ8WUF5 828 aa7.77□□□□□ -1.17
LMBR1-216ENST00000477983 JARID2Q92833 1246 aaPredicted RBP7.77□□□□□ -1.17
LMBR1-216ENST00000477983 Q96M66 194 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms