RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 DISP3Q9P2K9 1392 aa7.32□□□□□ -1.24
VPS45-207ENST00000477558 NINLQ9Y2I6 1382 aa7.32□□□□□ -1.24
VPS45-207ENST00000477558 USP6P35125 1406 aa7.32□□□□□ -1.24
VPS45-207ENST00000477558 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.31□□□□□ -1.24
VPS45-207ENST00000477558 ST20-MTHFSA0A0A6YYL1 179 aa7.31□□□□□ -1.24
VPS45-207ENST00000477558 COL8A1P27658 744 aa7.31□□□□□ -1.24
VPS45-207ENST00000477558 GNA15P30679 374 aa7.31□□□□□ -1.24
VPS45-207ENST00000477558 LRRC59Q96AG4 307 aaKnown RBP7.31□□□□□ -1.24
VPS45-207ENST00000477558 SPG7Q9UQ90 795 aa7.31□□□□□ -1.24
VPS45-207ENST00000477558 A0A0A0MRY4 1105 aa7.3□□□□□ -1.24
VPS45-207ENST00000477558 ARHGEF10O15013 1369 aa7.3□□□□□ -1.24
VPS45-207ENST00000477558 SLIT3O75094 1523 aa7.3□□□□□ -1.24
VPS45-207ENST00000477558 DEAF1O75398 565 aaPredicted RBP7.3□□□□□ -1.24
VPS45-207ENST00000477558 DAB2P98082 770 aa7.3□□□□□ -1.24
VPS45-207ENST00000477558 XPCQ01831 940 aaPredicted RBP7.3□□□□□ -1.24
VPS45-207ENST00000477558 SETDB1Q15047 1291 aa7.3□□□□□ -1.24
VPS45-207ENST00000477558 PRPF40BQ6NWY9 871 aaKnown RBP7.3□□□□□ -1.24
VPS45-207ENST00000477558 CACTIN-AS1Q8N1I8 211 aa7.3□□□□□ -1.24
VPS45-207ENST00000477558 PPP4R2Q9NY27 417 aa7.3□□□□□ -1.24
VPS45-207ENST00000477558 NWD2Q9ULI1 1742 aa7.3□□□□□ -1.24
VPS45-207ENST00000477558 AK5Q9Y6K8 562 aa7.3□□□□□ -1.24
VPS45-207ENST00000477558 NRAPQ86VF7 1730 aa7.29□□□□□ -1.24
VPS45-207ENST00000477558 ACEP12821 1306 aa7.29□□□□□ -1.24
VPS45-207ENST00000477558 RBM47A0AV96 593 aaKnown RBP7.29□□□□□ -1.24
VPS45-207ENST00000477558 SOX1O00570 391 aaPredicted RBP7.29□□□□□ -1.24
VPS45-207ENST00000477558 ITPKAP23677 461 aa7.29□□□□□ -1.24
VPS45-207ENST00000477558 FGD1P98174 961 aa7.29□□□□□ -1.24
VPS45-207ENST00000477558 PSMD2Q13200 908 aa7.29□□□□□ -1.24
VPS45-207ENST00000477558 ZNF423Q2M1K9 1284 aa7.29□□□□□ -1.24
VPS45-207ENST00000477558 ALYREFQ86V81 257 aaKnown RBP7.29□□□□□ -1.24
VPS45-207ENST00000477558 C12orf49Q9H741 205 aa7.29□□□□□ -1.24
VPS45-207ENST00000477558 PLCH1Q4KWH8 1693 aa7.29□□□□□ -1.24
VPS45-207ENST00000477558 LMO7Q8WWI1 1683 aa7.29□□□□□ -1.24
VPS45-207ENST00000477558 USP19O94966 1318 aa7.28□□□□□ -1.24
VPS45-207ENST00000477558 GIPC1O14908 333 aa7.28□□□□□ -1.24
VPS45-207ENST00000477558 TRIM28Q13263 835 aaKnown RBP7.28□□□□□ -1.24
VPS45-207ENST00000477558 DTHD1Q6ZMT9 781 aa7.28□□□□□ -1.24
VPS45-207ENST00000477558 TMC4Q7Z404 712 aa7.28□□□□□ -1.24
VPS45-207ENST00000477558 GALNT11Q8NCW6 608 aa7.28□□□□□ -1.24
VPS45-207ENST00000477558 C3orf58Q8NDZ4 430 aa7.28□□□□□ -1.24
VPS45-207ENST00000477558 ZNF428Q96B54 188 aa7.28□□□□□ -1.24
VPS45-207ENST00000477558 CARD10Q9BWT7 1032 aa7.28□□□□□ -1.24
VPS45-207ENST00000477558 NOP53Q9NZM5 478 aaKnown RBP7.28□□□□□ -1.24
VPS45-207ENST00000477558 AKAP2Q9Y2D5 859 aa7.28□□□□□ -1.24
VPS45-207ENST00000477558 A0A1W2PP64 1363 aa7.28□□□□□ -1.24
VPS45-207ENST00000477558 FAM177BA6PVY3 158 aa7.27□□□□□ -1.24
VPS45-207ENST00000477558 TM4SF5O14894 197 aa7.27□□□□□ -1.24
VPS45-207ENST00000477558 FSCN2O14926 492 aa7.27□□□□□ -1.24
VPS45-207ENST00000477558 ESRRAP11474 423 aaPredicted RBP7.27□□□□□ -1.24
VPS45-207ENST00000477558 EIF4BP23588 611 aaKnown RBP7.27□□□□□ -1.24
VPS45-207ENST00000477558 CABP4P57796 275 aa7.27□□□□□ -1.24
VPS45-207ENST00000477558 PCDH1Q08174 1060 aa7.27□□□□□ -1.24
VPS45-207ENST00000477558 GRIK4Q16099 956 aa7.27□□□□□ -1.24
VPS45-207ENST00000477558 KRT28Q7Z3Y7 464 aa7.27□□□□□ -1.24
VPS45-207ENST00000477558 FMR1NBQ8N0W7 255 aaPredicted RBP7.27□□□□□ -1.24
VPS45-207ENST00000477558 PMFBP1Q8TBY8 1022 aa7.27□□□□□ -1.24
VPS45-207ENST00000477558 SLC7A3Q8WY07 619 aa7.27□□□□□ -1.24
VPS45-207ENST00000477558 FRMD6Q96NE9 622 aa7.27□□□□□ -1.24
VPS45-207ENST00000477558 CLEC4MQ9H2X3 399 aaPredicted RBP7.27□□□□□ -1.24
VPS45-207ENST00000477558 ZNF576Q9H609 170 aa7.27□□□□□ -1.24
VPS45-207ENST00000477558 SLIT2O94813 1529 aa7.27□□□□□ -1.25
VPS45-207ENST00000477558 NFAT5O94916 1531 aa7.27□□□□□ -1.25
VPS45-207ENST00000477558 ABCC6O95255 1503 aa7.27□□□□□ -1.25
VPS45-207ENST00000477558 EDC4Q6P2E9 1401 aaKnown RBP7.27□□□□□ -1.25
VPS45-207ENST00000477558 COL14A1Q05707 1796 aaKnown RBP7.27□□□□□ -1.25
VPS45-207ENST00000477558 EP400Q96L91 3159 aa7.27□□□□□ -1.25
VPS45-207ENST00000477558 ANKRD36BQ8N2N9 1353 aa7.27□□□□□ -1.25
VPS45-207ENST00000477558 KRBA1A5PL33 1030 aa7.27□□□□□ -1.25
VPS45-207ENST00000477558 H3BRJ5 948 aa7.27□□□□□ -1.25
VPS45-207ENST00000477558 USP17L7P0C7H9 530 aa7.27□□□□□ -1.25
VPS45-207ENST00000477558 ZNF157P51786 506 aaPredicted RBP7.27□□□□□ -1.25
VPS45-207ENST00000477558 FAAP100Q0VG06 881 aa7.27□□□□□ -1.25
VPS45-207ENST00000477558 IKBKEQ14164 716 aa7.27□□□□□ -1.25
VPS45-207ENST00000477558 FBXO11Q86XK2 927 aa7.27□□□□□ -1.25
VPS45-207ENST00000477558 KLHDC7BQ96G42 594 aa7.27□□□□□ -1.25
VPS45-207ENST00000477558 KIF20BQ96Q89 1820 aa7.26□□□□□ -1.25
VPS45-207ENST00000477558 COL18A1P39060 1754 aa7.26□□□□□ -1.25
VPS45-207ENST00000477558 ANKRD26Q9UPS8 1709 aa7.26□□□□□ -1.25
VPS45-207ENST00000477558 OVOS2A0A0J9YW53 1432 aa7.26□□□□□ -1.25
VPS45-207ENST00000477558 OVOS2Q6IE36 1432 aa7.26□□□□□ -1.25
VPS45-207ENST00000477558 USP31Q70CQ4 1352 aa7.26□□□□□ -1.25
VPS45-207ENST00000477558 DDX3YO15523 660 aaKnown RBP7.26□□□□□ -1.25
VPS45-207ENST00000477558 CTSHP09668 335 aa7.26□□□□□ -1.25
VPS45-207ENST00000477558 HSPA5P11021 654 aaKnown RBP7.26□□□□□ -1.25
VPS45-207ENST00000477558 PTPN12Q05209 780 aaKnown RBP7.26□□□□□ -1.25
VPS45-207ENST00000477558 SRCIN1Q9C0H9 1055 aa7.26□□□□□ -1.25
VPS45-207ENST00000477558 KCNK4Q9NYG8 393 aa7.26□□□□□ -1.25
VPS45-207ENST00000477558 FAM8A1Q9UBU6 413 aa7.26□□□□□ -1.25
VPS45-207ENST00000477558 RGS17Q9UGC6 210 aaPredicted RBP7.26□□□□□ -1.25
VPS45-207ENST00000477558 CPDO75976 1380 aa7.25□□□□□ -1.25
VPS45-207ENST00000477558 UNCXA6NJT0 531 aa7.25□□□□□ -1.25
VPS45-207ENST00000477558 SPDYE3A6NKU9 549 aa7.25□□□□□ -1.25
VPS45-207ENST00000477558 SORBS3O60504 671 aa7.25□□□□□ -1.25
VPS45-207ENST00000477558 GSTT1P30711 240 aa7.25□□□□□ -1.25
VPS45-207ENST00000477558 RAC1P63000 192 aa7.25□□□□□ -1.25
VPS45-207ENST00000477558 TMF1P82094 1093 aa7.25□□□□□ -1.25
VPS45-207ENST00000477558 FAM117BQ6P1L5 589 aa7.25□□□□□ -1.25
VPS45-207ENST00000477558 SHISA2Q6UWI4 295 aa7.25□□□□□ -1.25
VPS45-207ENST00000477558 Q8N3U1 123 aa7.25□□□□□ -1.25
VPS45-207ENST00000477558 DTWD1Q8N5C7 304 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms