RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 PTCH2Q9Y6C5 1203 aa27.39■■□□□ 1.98
CNIH4-208ENST00000477413 SMARCA5O60264 1052 aaPredicted RBP27.38■■□□□ 1.97
CNIH4-208ENST00000477413 GABPAQ06546 454 aa27.38■■□□□ 1.97
CNIH4-208ENST00000477413 UBE3CQ15386 1083 aa27.38■■□□□ 1.97
CNIH4-208ENST00000477413 TREML2Q5T2D2 321 aa27.38■■□□□ 1.97
CNIH4-208ENST00000477413 ZNF333Q96JL9 665 aa27.38■■□□□ 1.97
CNIH4-208ENST00000477413 HMGCS2P54868 508 aa27.37■■□□□ 1.97
CNIH4-208ENST00000477413 BACE1P56817 501 aa27.37■■□□□ 1.97
CNIH4-208ENST00000477413 PSMC4P43686 418 aa27.36■■□□□ 1.97
CNIH4-208ENST00000477413 PABPC4Q13310 644 aaKnown RBP eCLIP27.36■■□□□ 1.97
CNIH4-208ENST00000477413 LCORLQ8N3X6 602 aa27.36■■□□□ 1.97
CNIH4-208ENST00000477413 DCP1AQ9NPI6 582 aaPredicted RBP27.36■■□□□ 1.97
CNIH4-208ENST00000477413 SRRDQ9UH36 339 aa27.36■■□□□ 1.97
CNIH4-208ENST00000477413 C19orf81C9J6K1 198 aa27.35■■□□□ 1.97
CNIH4-208ENST00000477413 SHROOM1Q2M3G4 852 aaPredicted RBP27.35■■□□□ 1.97
CNIH4-208ENST00000477413 GPATCH3Q96I76 525 aa27.35■■□□□ 1.97
CNIH4-208ENST00000477413 MYH8P13535 1937 aa27.35■■□□□ 1.97
CNIH4-208ENST00000477413 BAZ2AQ9UIF9 1905 aaKnown RBP27.35■■□□□ 1.97
CNIH4-208ENST00000477413 MKI67P46013 3256 aaKnown RBP27.35■■□□□ 1.97
CNIH4-208ENST00000477413 GDF11O95390 407 aa27.34■■□□□ 1.97
CNIH4-208ENST00000477413 PLCD1P51178 756 aa27.34■■□□□ 1.97
CNIH4-208ENST00000477413 MTMR2Q13614 643 aa27.34■■□□□ 1.97
CNIH4-208ENST00000477413 FAM110CQ1W6H9 321 aa27.34■■□□□ 1.97
CNIH4-208ENST00000477413 SLC9C1Q4G0N8 1177 aa27.34■■□□□ 1.97
CNIH4-208ENST00000477413 SMCR8Q8TEV9 937 aaPredicted RBP27.34■■□□□ 1.97
CNIH4-208ENST00000477413 OSBPP22059 807 aa27.33■■□□□ 1.97
CNIH4-208ENST00000477413 HOXD10P28358 340 aa27.33■■□□□ 1.97
CNIH4-208ENST00000477413 HOXA7P31268 230 aaPredicted RBP27.33■■□□□ 1.97
CNIH4-208ENST00000477413 SHMT1P34896 483 aa27.33■■□□□ 1.97
CNIH4-208ENST00000477413 GCLCP48506 637 aaPredicted RBP27.33■■□□□ 1.97
CNIH4-208ENST00000477413 FCGRTP55899 365 aa27.33■■□□□ 1.97
CNIH4-208ENST00000477413 ZSCAN25Q6NSZ9 544 aa27.33■■□□□ 1.97
CNIH4-208ENST00000477413 ATP8A2Q9NTI2 1148 aa27.33■■□□□ 1.97
CNIH4-208ENST00000477413 USP17L10C9JJH3 530 aa27.32■■□□□ 1.96
CNIH4-208ENST00000477413 AAMPQ13685 434 aa27.32■■□□□ 1.96
CNIH4-208ENST00000477413 SLC4A8Q2Y0W8 1093 aa27.32■■□□□ 1.96
CNIH4-208ENST00000477413 NBPF11Q86T75 865 aa27.32■■□□□ 1.96
CNIH4-208ENST00000477413 SDR42E1Q8WUS8 393 aa27.32■■□□□ 1.96
CNIH4-208ENST00000477413 C12orf42Q96LP6 360 aa27.32■■□□□ 1.96
CNIH4-208ENST00000477413 TTC41PQ6P2S7 1318 aa27.32■■□□□ 1.96
CNIH4-208ENST00000477413 MBD4O95243 580 aa27.31■■□□□ 1.96
CNIH4-208ENST00000477413 GH2P01242 217 aa27.31■■□□□ 1.96
CNIH4-208ENST00000477413 KBTBD3Q8NAB2 608 aa27.31■■□□□ 1.96
CNIH4-208ENST00000477413 ASCC2Q9H1I8 757 aaPredicted RBP27.31■■□□□ 1.96
CNIH4-208ENST00000477413 ARMT1Q9H993 441 aa27.31■■□□□ 1.96
CNIH4-208ENST00000477413 MCM9Q9NXL9 1143 aa27.31■■□□□ 1.96
CNIH4-208ENST00000477413 CERKLQ49MI3 558 aaPredicted RBP27.3■■□□□ 1.96
CNIH4-208ENST00000477413 CRBNQ96SW2 442 aa27.3■■□□□ 1.96
CNIH4-208ENST00000477413 TMOD4Q9NZQ9 345 aa27.3■■□□□ 1.96
CNIH4-208ENST00000477413 DOCK3Q8IZD9 2030 aa27.29■■□□□ 1.96
CNIH4-208ENST00000477413 POLR3DP05423 398 aaPredicted RBP27.29■■□□□ 1.96
CNIH4-208ENST00000477413 SLFNL1Q499Z3 407 aa27.29■■□□□ 1.96
CNIH4-208ENST00000477413 BCL11AQ9H165 835 aa27.29■■□□□ 1.96
CNIH4-208ENST00000477413 MORF4L1Q9UBU8 362 aa27.29■■□□□ 1.96
CNIH4-208ENST00000477413 MYPNQ86TC9 1320 aa27.29■■□□□ 1.96
CNIH4-208ENST00000477413 SALL3Q9BXA9 1300 aa27.29■■□□□ 1.96
CNIH4-208ENST00000477413 POTEFA5A3E0 1075 aa27.28■■□□□ 1.96
CNIH4-208ENST00000477413 FMNL1O95466 1100 aaPredicted RBP27.28■■□□□ 1.96
CNIH4-208ENST00000477413 HDAC1Q13547 482 aaPredicted RBP27.28■■□□□ 1.96
CNIH4-208ENST00000477413 ABCB5Q2M3G0 1257 aa27.28■■□□□ 1.96
CNIH4-208ENST00000477413 KIAA1683Q9H0B3 1180 aa27.28■■□□□ 1.96
CNIH4-208ENST00000477413 SWAP70Q9UH65 585 aa27.28■■□□□ 1.96
CNIH4-208ENST00000477413 CHGBP05060 677 aa27.27■■□□□ 1.96
CNIH4-208ENST00000477413 ANKRD13CQ8N6S4 541 aa27.27■■□□□ 1.96
CNIH4-208ENST00000477413 PI4K2BQ8TCG2 481 aa27.27■■□□□ 1.96
CNIH4-208ENST00000477413 GUCY1A2P33402 732 aa27.26■■□□□ 1.95
CNIH4-208ENST00000477413 EVX2Q03828 476 aa27.26■■□□□ 1.95
CNIH4-208ENST00000477413 PRKCZQ05513 592 aa27.26■■□□□ 1.95
CNIH4-208ENST00000477413 USP17L2Q6R6M4 530 aa27.26■■□□□ 1.95
CNIH4-208ENST00000477413 PUS7LQ9H0K6 701 aaKnown RBP27.26■■□□□ 1.95
CNIH4-208ENST00000477413 EMILIN3Q9NT22 766 aa27.26■■□□□ 1.95
CNIH4-208ENST00000477413 PRKAB2O43741 272 aa27.25■■□□□ 1.95
CNIH4-208ENST00000477413 ZFYP08048 801 aaPredicted RBP27.25■■□□□ 1.95
CNIH4-208ENST00000477413 IRF5Q13568 498 aa27.25■■□□□ 1.95
CNIH4-208ENST00000477413 C12orf60Q5U649 245 aa27.25■■□□□ 1.95
CNIH4-208ENST00000477413 GTF3C2Q8WUA4 911 aaPredicted RBP27.25■■□□□ 1.95
CNIH4-208ENST00000477413 YTHDC1Q96MU7 727 aaKnown RBP27.25■■□□□ 1.95
CNIH4-208ENST00000477413 GREB1LQ9C091 1923 aaPredicted RBP27.25■■□□□ 1.95
CNIH4-208ENST00000477413 ERC2O15083 957 aa27.24■■□□□ 1.95
CNIH4-208ENST00000477413 GRK4P32298 578 aa27.24■■□□□ 1.95
CNIH4-208ENST00000477413 USP14P54578 494 aa27.24■■□□□ 1.95
CNIH4-208ENST00000477413 IRX3P78415 501 aaPredicted RBP27.24■■□□□ 1.95
CNIH4-208ENST00000477413 TSHZ3Q63HK5 1081 aa27.24■■□□□ 1.95
CNIH4-208ENST00000477413 SLAIN1Q8ND83 568 aa27.24■■□□□ 1.95
CNIH4-208ENST00000477413 RAET1EQ8TD07 263 aa27.24■■□□□ 1.95
CNIH4-208ENST00000477413 SH3TC2Q8TF17 1288 aa27.24■■□□□ 1.95
CNIH4-208ENST00000477413 APPBP2Q92624 585 aa27.24■■□□□ 1.95
CNIH4-208ENST00000477413 CABP5Q9NP86 173 aa27.24■■□□□ 1.95
CNIH4-208ENST00000477413 PLXNB2O15031 1838 aa27.24■■□□□ 1.95
CNIH4-208ENST00000477413 GLRX3O76003 335 aaKnown RBP27.23■■□□□ 1.95
CNIH4-208ENST00000477413 GIMAP6Q6P9H5 292 aa27.23■■□□□ 1.95
CNIH4-208ENST00000477413 GCC1Q96CN9 775 aa27.23■■□□□ 1.95
CNIH4-208ENST00000477413 TNPO2O14787 897 aaKnown RBP27.22■■□□□ 1.95
CNIH4-208ENST00000477413 CYP2D6P10635 497 aa27.22■■□□□ 1.95
CNIH4-208ENST00000477413 HERVK_113P62684 666 aa27.22■■□□□ 1.95
CNIH4-208ENST00000477413 PXYLP1Q8TE99 480 aa27.22■■□□□ 1.95
CNIH4-208ENST00000477413 STRBPQ96SI9 672 aaKnown RBP27.22■■□□□ 1.95
CNIH4-208ENST00000477413 TMEM106CQ9BVX2 250 aa27.22■■□□□ 1.95
CNIH4-208ENST00000477413 GABRQQ9UN88 632 aa27.22■■□□□ 1.95
CNIH4-208ENST00000477413 ROBO3Q96MS0 1386 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms