RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 TBC1D2Q9BYX2 928 aa18.81■□□□□ 0.6
COMMD6-209ENST00000477377 CRNKL1Q9BZJ0 848 aaKnown RBP18.81■□□□□ 0.6
COMMD6-209ENST00000477377 ZBTB21Q9ULJ3 1066 aa18.81■□□□□ 0.6
COMMD6-209ENST00000477377 SUPT16HQ9Y5B9 1047 aaKnown RBP18.81■□□□□ 0.6
COMMD6-209ENST00000477377 MYH7P12883 1935 aa18.8■□□□□ 0.6
COMMD6-209ENST00000477377 IGHDP01880 384 aa18.8■□□□□ 0.6
COMMD6-209ENST00000477377 ASNSP08243 561 aa18.8■□□□□ 0.6
COMMD6-209ENST00000477377 GUCY1A2P33402 732 aa18.8■□□□□ 0.6
COMMD6-209ENST00000477377 AAMPQ13685 434 aa18.8■□□□□ 0.6
COMMD6-209ENST00000477377 GADL1Q6ZQY3 521 aa18.8■□□□□ 0.6
COMMD6-209ENST00000477377 GCC1Q96CN9 775 aa18.8■□□□□ 0.6
COMMD6-209ENST00000477377 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.8■□□□□ 0.6
COMMD6-209ENST00000477377 EFCC1Q9HA90 598 aa18.8■□□□□ 0.6
COMMD6-209ENST00000477377 AGTPBP1Q9UPW5 1226 aa18.8■□□□□ 0.6
COMMD6-209ENST00000477377 LOC285556D6RIA3 1793 aa18.79■□□□□ 0.6
COMMD6-209ENST00000477377 ANKRD45Q5TZF3 282 aa18.79■□□□□ 0.6
COMMD6-209ENST00000477377 PROCA1Q8NCQ7 364 aaPredicted RBP18.79■□□□□ 0.6
COMMD6-209ENST00000477377 OSBP2Q969R2 916 aa18.79■□□□□ 0.6
COMMD6-209ENST00000477377 GINM1Q9NU53 330 aa18.79■□□□□ 0.6
COMMD6-209ENST00000477377 MCM9Q9NXL9 1143 aa18.79■□□□□ 0.6
COMMD6-209ENST00000477377 NAV1Q8NEY1 1877 aa18.79■□□□□ 0.6
COMMD6-209ENST00000477377 GH2P01242 217 aa18.78■□□□□ 0.6
COMMD6-209ENST00000477377 HMGCS2P54868 508 aa18.78■□□□□ 0.6
COMMD6-209ENST00000477377 BACE1P56817 501 aa18.78■□□□□ 0.6
COMMD6-209ENST00000477377 SMC5Q8IY18 1101 aa18.78■□□□□ 0.6
COMMD6-209ENST00000477377 STRBPQ96SI9 672 aaKnown RBP18.78■□□□□ 0.6
COMMD6-209ENST00000477377 PARK7Q99497 189 aaKnown RBP18.78■□□□□ 0.6
COMMD6-209ENST00000477377 ATP8A2Q9NTI2 1148 aa18.78■□□□□ 0.6
COMMD6-209ENST00000477377 BRCA2P51587 3418 aa18.77■□□□□ 0.6
COMMD6-209ENST00000477377 POLR3DP05423 398 aaPredicted RBP18.77■□□□□ 0.6
COMMD6-209ENST00000477377 MX1P20591 662 aa18.77■□□□□ 0.6
COMMD6-209ENST00000477377 MTMR2Q13614 643 aa18.77■□□□□ 0.6
COMMD6-209ENST00000477377 ZSCAN25Q6NSZ9 544 aa18.77■□□□□ 0.6
COMMD6-209ENST00000477377 GPATCH3Q96I76 525 aa18.77■□□□□ 0.6
COMMD6-209ENST00000477377 AS3MTQ9HBK9 375 aa18.77■□□□□ 0.6
COMMD6-209ENST00000477377 STAP2Q9UGK3 403 aa18.77■□□□□ 0.6
COMMD6-209ENST00000477377 CYP2D7A0A087X1C5 515 aa18.76■□□□□ 0.59
COMMD6-209ENST00000477377 RNF113AO15541 343 aaKnown RBP18.76■□□□□ 0.59
COMMD6-209ENST00000477377 GLRX3O76003 335 aaKnown RBP18.76■□□□□ 0.59
COMMD6-209ENST00000477377 CERKLQ49MI3 558 aaPredicted RBP18.76■□□□□ 0.59
COMMD6-209ENST00000477377 C12orf60Q5U649 245 aa18.76■□□□□ 0.59
COMMD6-209ENST00000477377 SLC44A5Q8NCS7 719 aa18.76■□□□□ 0.59
COMMD6-209ENST00000477377 DYNLL2Q96FJ2 89 aa18.76■□□□□ 0.59
COMMD6-209ENST00000477377 TRIM34Q9BYJ4 488 aa18.76■□□□□ 0.59
COMMD6-209ENST00000477377 EMILIN3Q9NT22 766 aa18.76■□□□□ 0.59
COMMD6-209ENST00000477377 BAZ2AQ9UIF9 1905 aaKnown RBP18.75■□□□□ 0.59
COMMD6-209ENST00000477377 USP17L10C9JJH3 530 aa18.75■□□□□ 0.59
COMMD6-209ENST00000477377 CTR9Q6PD62 1173 aa18.75■□□□□ 0.59
COMMD6-209ENST00000477377 POTEEQ6S8J3 1075 aa18.75■□□□□ 0.59
COMMD6-209ENST00000477377 APPBP2Q92624 585 aa18.75■□□□□ 0.59
COMMD6-209ENST00000477377 TRIM47Q96LD4 638 aa18.75■□□□□ 0.59
COMMD6-209ENST00000477377 PTCH2Q9Y6C5 1203 aa18.75■□□□□ 0.59
COMMD6-209ENST00000477377 SLC4A4Q9Y6R1 1079 aa18.75■□□□□ 0.59
COMMD6-209ENST00000477377 GSG1L2A8MUP6 293 aa18.74■□□□□ 0.59
COMMD6-209ENST00000477377 C19orf81C9J6K1 198 aa18.74■□□□□ 0.59
COMMD6-209ENST00000477377 USP17L12C9JPN9 530 aa18.74■□□□□ 0.59
COMMD6-209ENST00000477377 USP17L21D6R901 530 aa18.74■□□□□ 0.59
COMMD6-209ENST00000477377 M0R2C6 588 aa18.74■□□□□ 0.59
COMMD6-209ENST00000477377 ERC2O15083 957 aa18.74■□□□□ 0.59
COMMD6-209ENST00000477377 HOXA7P31268 230 aaPredicted RBP18.74■□□□□ 0.59
COMMD6-209ENST00000477377 PSMC4P43686 418 aa18.74■□□□□ 0.59
COMMD6-209ENST00000477377 PDE1AP54750 535 aa18.74■□□□□ 0.59
COMMD6-209ENST00000477377 SOX10P56693 466 aa18.74■□□□□ 0.59
COMMD6-209ENST00000477377 ACER1Q8TDN7 264 aa18.74■□□□□ 0.59
COMMD6-209ENST00000477377 ARMC5Q96C12 935 aa18.74■□□□□ 0.59
COMMD6-209ENST00000477377 ECM2O94769 699 aaPredicted RBP18.73■□□□□ 0.59
COMMD6-209ENST00000477377 ABCB5Q2M3G0 1257 aa18.73■□□□□ 0.59
COMMD6-209ENST00000477377 SIAH1Q8IUQ4 282 aa18.73■□□□□ 0.59
COMMD6-209ENST00000477377 SEC62Q99442 399 aaKnown RBP18.73■□□□□ 0.59
COMMD6-209ENST00000477377 ASCC2Q9H1I8 757 aaPredicted RBP18.73■□□□□ 0.59
COMMD6-209ENST00000477377 A0A1W2PRG0 241 aa18.72■□□□□ 0.59
COMMD6-209ENST00000477377 ZFYP08048 801 aaPredicted RBP18.72■□□□□ 0.59
COMMD6-209ENST00000477377 OSBPP22059 807 aa18.72■□□□□ 0.59
COMMD6-209ENST00000477377 SEPT2Q15019 361 aa18.72■□□□□ 0.59
COMMD6-209ENST00000477377 C12orf42Q96LP6 360 aa18.72■□□□□ 0.59
COMMD6-209ENST00000477377 RWDD1Q9H446 243 aaPredicted RBP18.72■□□□□ 0.59
COMMD6-209ENST00000477377 EPB41L4AQ9HCS5 686 aaPredicted RBP18.72■□□□□ 0.59
COMMD6-209ENST00000477377 GPAA1O43292 621 aa18.71■□□□□ 0.59
COMMD6-209ENST00000477377 GNRH1P01148 92 aa18.71■□□□□ 0.59
COMMD6-209ENST00000477377 CDK8P49336 464 aa18.71■□□□□ 0.59
COMMD6-209ENST00000477377 SBK1Q52WX2 424 aa18.71■□□□□ 0.59
COMMD6-209ENST00000477377 ZMYM1Q5SVZ6 1142 aa18.71■□□□□ 0.59
COMMD6-209ENST00000477377 C16orf86Q6ZW13 317 aa18.71■□□□□ 0.59
COMMD6-209ENST00000477377 ANKRD13CQ8N6S4 541 aa18.71■□□□□ 0.59
COMMD6-209ENST00000477377 P2RX7Q99572 595 aaKnown RBP18.71■□□□□ 0.59
COMMD6-209ENST00000477377 LNPKQ9C0E8 428 aa18.71■□□□□ 0.59
COMMD6-209ENST00000477377 SRRDQ9UH36 339 aa18.71■□□□□ 0.59
COMMD6-209ENST00000477377 SWAP70Q9UH65 585 aa18.71■□□□□ 0.59
COMMD6-209ENST00000477377 TAOK2Q9UL54 1235 aa18.71■□□□□ 0.59
COMMD6-209ENST00000477377 FOXP2O15409 715 aa18.7■□□□□ 0.58
COMMD6-209ENST00000477377 PEX10O60683 326 aa18.7■□□□□ 0.58
COMMD6-209ENST00000477377 AKR1B1P15121 316 aa18.7■□□□□ 0.58
COMMD6-209ENST00000477377 KIF22Q14807 665 aa18.7■□□□□ 0.58
COMMD6-209ENST00000477377 RAB3GAP1Q15042 981 aa18.7■□□□□ 0.58
COMMD6-209ENST00000477377 ARHGEF6Q15052 776 aa18.7■□□□□ 0.58
COMMD6-209ENST00000477377 GIMAP6Q6P9H5 292 aa18.7■□□□□ 0.58
COMMD6-209ENST00000477377 USP17L2Q6R6M4 530 aa18.7■□□□□ 0.58
COMMD6-209ENST00000477377 ZNF333Q96JL9 665 aa18.7■□□□□ 0.58
COMMD6-209ENST00000477377 KIAA1683Q9H0B3 1180 aa18.7■□□□□ 0.58
COMMD6-209ENST00000477377 PNMA3Q9UL41 463 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms