RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 ZSWIM8A7E2V4 1837 aa20.81■□□□□ 0.92
SMARCD3-210ENST00000477169 GOLIM4O00461 696 aa20.81■□□□□ 0.92
SMARCD3-210ENST00000477169 ERC2O15083 957 aa20.81■□□□□ 0.92
SMARCD3-210ENST00000477169 PDE4AP27815 886 aa20.81■□□□□ 0.92
SMARCD3-210ENST00000477169 PLEKHM2Q8IWE5 1019 aa20.81■□□□□ 0.92
SMARCD3-210ENST00000477169 TRIM34Q9BYJ4 488 aa20.81■□□□□ 0.92
SMARCD3-210ENST00000477169 AS3MTQ9HBK9 375 aa20.81■□□□□ 0.92
SMARCD3-210ENST00000477169 PAG1Q9NWQ8 432 aa20.81■□□□□ 0.92
SMARCD3-210ENST00000477169 GLRX3O76003 335 aaKnown RBP20.8■□□□□ 0.92
SMARCD3-210ENST00000477169 HLA-DOAP06340 250 aa20.8■□□□□ 0.92
SMARCD3-210ENST00000477169 ASNSP08243 561 aa20.8■□□□□ 0.92
SMARCD3-210ENST00000477169 OSBPP22059 807 aa20.8■□□□□ 0.92
SMARCD3-210ENST00000477169 CRACR2BQ8N4Y2 399 aaPredicted RBP20.8■□□□□ 0.92
SMARCD3-210ENST00000477169 MIGA1Q8NAN2 632 aa20.8■□□□□ 0.92
SMARCD3-210ENST00000477169 GINM1Q9NU53 330 aa20.8■□□□□ 0.92
SMARCD3-210ENST00000477169 ATAD5Q96QE3 1844 aa20.8■□□□□ 0.92
SMARCD3-210ENST00000477169 RBBP6Q7Z6E9 1792 aaKnown RBP20.8■□□□□ 0.92
SMARCD3-210ENST00000477169 SIPA1L1O43166 1804 aa20.79■□□□□ 0.92
SMARCD3-210ENST00000477169 ECM2O94769 699 aaPredicted RBP20.79■□□□□ 0.92
SMARCD3-210ENST00000477169 USP5P45974 858 aa20.79■□□□□ 0.92
SMARCD3-210ENST00000477169 FCGRTP55899 365 aa20.79■□□□□ 0.92
SMARCD3-210ENST00000477169 SH3D19Q5HYK7 790 aa20.79■□□□□ 0.92
SMARCD3-210ENST00000477169 SMCR8Q8TEV9 937 aaPredicted RBP20.79■□□□□ 0.92
SMARCD3-210ENST00000477169 WDR18Q9BV38 432 aa20.79■□□□□ 0.92
SMARCD3-210ENST00000477169 DNAJC18Q9H819 358 aa20.79■□□□□ 0.92
SMARCD3-210ENST00000477169 SAP30BPQ9UHR5 308 aaKnown RBP20.79■□□□□ 0.92
SMARCD3-210ENST00000477169 PNMA3Q9UL41 463 aa20.79■□□□□ 0.92
SMARCD3-210ENST00000477169 PDE4DIPQ5VU43 2346 aa20.79■□□□□ 0.92
SMARCD3-210ENST00000477169 PABPC4Q13310 644 aaKnown RBP eCLIP20.78■□□□□ 0.92
SMARCD3-210ENST00000477169 TREML2Q5T2D2 321 aa20.78■□□□□ 0.92
SMARCD3-210ENST00000477169 SH3TC2Q8TF17 1288 aa20.78■□□□□ 0.92
SMARCD3-210ENST00000477169 OSBPL3Q9H4L5 887 aa20.78■□□□□ 0.92
SMARCD3-210ENST00000477169 KIAA0100Q14667 2235 aaKnown RBP20.77■□□□□ 0.92
SMARCD3-210ENST00000477169 EN2P19622 333 aaPredicted RBP20.77■□□□□ 0.92
SMARCD3-210ENST00000477169 HMGCS2P54868 508 aa20.77■□□□□ 0.92
SMARCD3-210ENST00000477169 RAET1EQ8TD07 263 aa20.77■□□□□ 0.92
SMARCD3-210ENST00000477169 MYPNQ86TC9 1320 aa20.77■□□□□ 0.91
SMARCD3-210ENST00000477169 JAG1P78504 1218 aa20.76■□□□□ 0.91
SMARCD3-210ENST00000477169 SLC4A8Q2Y0W8 1093 aa20.76■□□□□ 0.91
SMARCD3-210ENST00000477169 SLC9C2Q5TAH2 1124 aa20.76■□□□□ 0.91
SMARCD3-210ENST00000477169 TTC6Q86TZ1 520 aa20.76■□□□□ 0.91
SMARCD3-210ENST00000477169 RIOK1Q9BRS2 568 aaKnown RBP20.76■□□□□ 0.91
SMARCD3-210ENST00000477169 BRCA2P51587 3418 aa20.75■□□□□ 0.91
SMARCD3-210ENST00000477169 MYH1P12882 1939 aa20.75■□□□□ 0.91
SMARCD3-210ENST00000477169 MAGEB6P1A0A0J9YX57 407 aa20.75■□□□□ 0.91
SMARCD3-210ENST00000477169 C19orf81C9J6K1 198 aa20.75■□□□□ 0.91
SMARCD3-210ENST00000477169 PDE6AP16499 860 aa20.75■□□□□ 0.91
SMARCD3-210ENST00000477169 GRK4P32298 578 aa20.75■□□□□ 0.91
SMARCD3-210ENST00000477169 BACE1P56817 501 aa20.75■□□□□ 0.91
SMARCD3-210ENST00000477169 PRPF38BQ5VTL8 546 aaKnown RBP20.75■□□□□ 0.91
SMARCD3-210ENST00000477169 EHD4Q9H223 541 aa20.75■□□□□ 0.91
SMARCD3-210ENST00000477169 MGAMO43451 1857 aa20.75■□□□□ 0.91
SMARCD3-210ENST00000477169 LOC285556D6RIA3 1793 aa20.74■□□□□ 0.91
SMARCD3-210ENST00000477169 GDF11O95390 407 aa20.74■□□□□ 0.91
SMARCD3-210ENST00000477169 GCLCP48506 637 aaPredicted RBP20.74■□□□□ 0.91
SMARCD3-210ENST00000477169 PRKCZQ05513 592 aa20.74■□□□□ 0.91
SMARCD3-210ENST00000477169 TATDN1Q6P1N9 297 aa20.74■□□□□ 0.91
SMARCD3-210ENST00000477169 ANKRD13CQ8N6S4 541 aa20.74■□□□□ 0.91
SMARCD3-210ENST00000477169 SERPINB13Q9UIV8 391 aa20.74■□□□□ 0.91
SMARCD3-210ENST00000477169 ZBTB21Q9ULJ3 1066 aa20.74■□□□□ 0.91
SMARCD3-210ENST00000477169 USP17L10C9JJH3 530 aa20.73■□□□□ 0.91
SMARCD3-210ENST00000477169 MTMR2Q13614 643 aa20.73■□□□□ 0.91
SMARCD3-210ENST00000477169 FAM110CQ1W6H9 321 aa20.73■□□□□ 0.91
SMARCD3-210ENST00000477169 KBTBD3Q8NAB2 608 aa20.73■□□□□ 0.91
SMARCD3-210ENST00000477169 TMOD4Q9NZQ9 345 aa20.73■□□□□ 0.91
SMARCD3-210ENST00000477169 ZNF532Q9HCE3 1301 aa20.73■□□□□ 0.91
SMARCD3-210ENST00000477169 MKI67P46013 3256 aaKnown RBP20.73■□□□□ 0.91
SMARCD3-210ENST00000477169 TCRBV5S4A2TA0A5A2 114 aa20.72■□□□□ 0.91
SMARCD3-210ENST00000477169 TNPO2O14787 897 aaKnown RBP20.72■□□□□ 0.91
SMARCD3-210ENST00000477169 MYCP01106 439 aaPredicted RBP20.72■□□□□ 0.91
SMARCD3-210ENST00000477169 HOXA7P31268 230 aaPredicted RBP20.72■□□□□ 0.91
SMARCD3-210ENST00000477169 CRNKL1Q9BZJ0 848 aaKnown RBP20.72■□□□□ 0.91
SMARCD3-210ENST00000477169 ASCC2Q9H1I8 757 aaPredicted RBP20.72■□□□□ 0.91
SMARCD3-210ENST00000477169 GABRQQ9UN88 632 aa20.72■□□□□ 0.91
SMARCD3-210ENST00000477169 ADD2P35612 726 aa20.71■□□□□ 0.91
SMARCD3-210ENST00000477169 SHROOM1Q2M3G4 852 aaPredicted RBP20.71■□□□□ 0.91
SMARCD3-210ENST00000477169 SKAP1Q86WV1 359 aa20.71■□□□□ 0.91
SMARCD3-210ENST00000477169 SLAIN1Q8ND83 568 aa20.71■□□□□ 0.91
SMARCD3-210ENST00000477169 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.71■□□□□ 0.91
SMARCD3-210ENST00000477169 MYH7P12883 1935 aa20.7■□□□□ 0.91
SMARCD3-210ENST00000477169 GH2P01242 217 aa20.7■□□□□ 0.9
SMARCD3-210ENST00000477169 CHGBP05060 677 aa20.7■□□□□ 0.9
SMARCD3-210ENST00000477169 FLT3LGP49771 235 aa20.7■□□□□ 0.9
SMARCD3-210ENST00000477169 UBXN2AP68543 259 aa20.7■□□□□ 0.9
SMARCD3-210ENST00000477169 MTFR1Q15390 333 aa20.7■□□□□ 0.9
SMARCD3-210ENST00000477169 SLFNL1Q499Z3 407 aa20.7■□□□□ 0.9
SMARCD3-210ENST00000477169 COA7Q96BR5 231 aa20.7■□□□□ 0.9
SMARCD3-210ENST00000477169 POLR3DP05423 398 aaPredicted RBP20.69■□□□□ 0.9
SMARCD3-210ENST00000477169 PLCD1P51178 756 aa20.69■□□□□ 0.9
SMARCD3-210ENST00000477169 IRX3P78415 501 aaPredicted RBP20.69■□□□□ 0.9
SMARCD3-210ENST00000477169 IRF5Q13568 498 aa20.69■□□□□ 0.9
SMARCD3-210ENST00000477169 CERKLQ49MI3 558 aaPredicted RBP20.69■□□□□ 0.9
SMARCD3-210ENST00000477169 PXYLP1Q8TE99 480 aa20.69■□□□□ 0.9
SMARCD3-210ENST00000477169 EVI5LQ96CN4 794 aa20.69■□□□□ 0.9
SMARCD3-210ENST00000477169 BIN2Q9UBW5 565 aaPredicted RBP20.69■□□□□ 0.9
SMARCD3-210ENST00000477169 ADCY3O60266 1144 aa20.68■□□□□ 0.9
SMARCD3-210ENST00000477169 SLC34A2O95436 690 aa20.68■□□□□ 0.9
SMARCD3-210ENST00000477169 TTC22Q5TAA0 569 aa20.68■□□□□ 0.9
SMARCD3-210ENST00000477169 ZSCAN25Q6NSZ9 544 aa20.68■□□□□ 0.9
SMARCD3-210ENST00000477169 USP17L2Q6R6M4 530 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms