RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 TSPY8P0CW00 308 aa23.26■■□□□ 1.31
CLK2-205ENST00000476983 RXRAP19793 462 aa23.26■■□□□ 1.31
CLK2-205ENST00000476983 LIFRP42702 1097 aa23.26■■□□□ 1.31
CLK2-205ENST00000476983 SEC23AQ15436 765 aa23.26■■□□□ 1.31
CLK2-205ENST00000476983 ENAHQ8N8S7 591 aaPredicted RBP23.26■■□□□ 1.31
CLK2-205ENST00000476983 DHX36Q9H2U1 1008 aaKnown RBP23.26■■□□□ 1.31
CLK2-205ENST00000476983 SCAF8Q9UPN6 1271 aaKnown RBP23.26■■□□□ 1.31
CLK2-205ENST00000476983 FAM196BA6NMK8 535 aa23.26■■□□□ 1.31
CLK2-205ENST00000476983 DDNO94850 711 aaPredicted RBP23.26■■□□□ 1.31
CLK2-205ENST00000476983 KIF4BQ2VIQ3 1234 aa23.26■■□□□ 1.31
CLK2-205ENST00000476983 SGMS1Q86VZ5 419 aa23.26■■□□□ 1.31
CLK2-205ENST00000476983 MTA3Q9BTC8 594 aa23.26■■□□□ 1.31
CLK2-205ENST00000476983 CHMP5Q9NZZ3 219 aa23.26■■□□□ 1.31
CLK2-205ENST00000476983 SMC3Q9UQE7 1217 aa23.26■■□□□ 1.31
CLK2-205ENST00000476983 CNTNAP1P78357 1384 aa23.25■■□□□ 1.31
CLK2-205ENST00000476983 APOA5Q6Q788 366 aa23.25■■□□□ 1.31
CLK2-205ENST00000476983 MICU3Q86XE3 530 aa23.25■■□□□ 1.31
CLK2-205ENST00000476983 CRACR2BQ8N4Y2 399 aaPredicted RBP23.25■■□□□ 1.31
CLK2-205ENST00000476983 CWC22Q9HCG8 908 aaKnown RBP23.25■■□□□ 1.31
CLK2-205ENST00000476983 HPS5Q9UPZ3 1129 aa23.25■■□□□ 1.31
CLK2-205ENST00000476983 MMP14P50281 582 aa23.24■■□□□ 1.31
CLK2-205ENST00000476983 CCDC144CPQ8IYA2 1237 aa23.24■■□□□ 1.31
CLK2-205ENST00000476983 DNAJC18Q9H819 358 aa23.24■■□□□ 1.31
CLK2-205ENST00000476983 GPRC5DQ9NZD1 345 aa23.24■■□□□ 1.31
CLK2-205ENST00000476983 SLC12A7Q9Y666 1083 aa23.24■■□□□ 1.31
CLK2-205ENST00000476983 ASTN2O75129 1339 aaPredicted RBP23.24■■□□□ 1.31
CLK2-205ENST00000476983 H7C1D1 291 aa23.24■■□□□ 1.31
CLK2-205ENST00000476983 IFIT1BQ5T764 474 aaKnown RBP23.24■■□□□ 1.31
CLK2-205ENST00000476983 EHD4Q9H223 541 aa23.24■■□□□ 1.31
CLK2-205ENST00000476983 PI4KBQ9UBF8 816 aa23.24■■□□□ 1.31
CLK2-205ENST00000476983 SWAP70Q9UH65 585 aa23.24■■□□□ 1.31
CLK2-205ENST00000476983 COL2A1P02458 1487 aaPredicted RBP23.23■■□□□ 1.31
CLK2-205ENST00000476983 ATRNL1Q5VV63 1379 aa23.23■■□□□ 1.31
CLK2-205ENST00000476983 GJB2P29033 226 aa23.23■■□□□ 1.31
CLK2-205ENST00000476983 SHMT1P34896 483 aa23.23■■□□□ 1.31
CLK2-205ENST00000476983 TRPM4Q8TD43 1214 aa23.23■■□□□ 1.31
CLK2-205ENST00000476983 FAM151AQ8WW52 585 aa23.23■■□□□ 1.31
CLK2-205ENST00000476983 CSRNP1Q96S65 589 aa23.23■■□□□ 1.31
CLK2-205ENST00000476983 TRIM34Q9BYJ4 488 aa23.23■■□□□ 1.31
CLK2-205ENST00000476983 TMEM39BQ9GZU3 492 aa23.23■■□□□ 1.31
CLK2-205ENST00000476983 IL17RBQ9NRM6 502 aa23.23■■□□□ 1.31
CLK2-205ENST00000476983 ZBTB43O43298 467 aa23.22■■□□□ 1.31
CLK2-205ENST00000476983 JAK2O60674 1132 aa23.22■■□□□ 1.31
CLK2-205ENST00000476983 PPFIA3O75145 1194 aa23.22■■□□□ 1.31
CLK2-205ENST00000476983 EPS15P42566 896 aa23.22■■□□□ 1.31
CLK2-205ENST00000476983 METAP2P50579 478 aaKnown RBP eCLIP23.22■■□□□ 1.31
CLK2-205ENST00000476983 CDAN1Q8IWY9 1227 aa23.22■■□□□ 1.31
CLK2-205ENST00000476983 GOLGA8AA7E2F4 631 aa23.21■■□□□ 1.31
CLK2-205ENST00000476983 GRIN3BO60391 1043 aa23.21■■□□□ 1.31
CLK2-205ENST00000476983 AKR1B1P15121 316 aa23.21■■□□□ 1.31
CLK2-205ENST00000476983 PKP1Q13835 747 aa23.21■■□□□ 1.31
CLK2-205ENST00000476983 SYNE3Q6ZMZ3 975 aa23.21■■□□□ 1.31
CLK2-205ENST00000476983 ZNF654Q8IZM8 581 aa23.21■■□□□ 1.31
CLK2-205ENST00000476983 TMTC2Q8N394 836 aa23.21■■□□□ 1.31
CLK2-205ENST00000476983 CIZ1Q9ULV3 898 aaPredicted RBP23.21■■□□□ 1.31
CLK2-205ENST00000476983 CTDNEP1O95476 244 aa23.2■■□□□ 1.3
CLK2-205ENST00000476983 NT5C2P49902 561 aa23.2■■□□□ 1.3
CLK2-205ENST00000476983 FKBP1CQ5VVH2 108 aa23.2■■□□□ 1.3
CLK2-205ENST00000476983 NEDD1Q8NHV4 660 aa23.2■■□□□ 1.3
CLK2-205ENST00000476983 NUP133Q8WUM0 1156 aa23.2■■□□□ 1.3
CLK2-205ENST00000476983 HACL1Q9UJ83 578 aa23.2■■□□□ 1.3
CLK2-205ENST00000476983 RCSD1Q6JBY9 416 aa23.19■■□□□ 1.3
CLK2-205ENST00000476983 NSUN7Q8NE18 718 aaKnown RBP23.19■■□□□ 1.3
CLK2-205ENST00000476983 DDX11Q96FC9 970 aa23.19■■□□□ 1.3
CLK2-205ENST00000476983 FAM83AQ86UY5 434 aa23.19■■□□□ 1.3
CLK2-205ENST00000476983 TCP11L1Q9NUJ3 509 aa23.19■■□□□ 1.3
CLK2-205ENST00000476983 PTPDC1A2A3K4 754 aa23.18■■□□□ 1.3
CLK2-205ENST00000476983 MPHOSPH10O00566 681 aaKnown RBP23.18■■□□□ 1.3
CLK2-205ENST00000476983 CDC27P30260 824 aa23.18■■□□□ 1.3
CLK2-205ENST00000476983 TNNI2P48788 182 aa23.18■■□□□ 1.3
CLK2-205ENST00000476983 FOXP4Q8IVH2 680 aaPredicted RBP23.18■■□□□ 1.3
CLK2-205ENST00000476983 STX8Q9UNK0 236 aa23.18■■□□□ 1.3
CLK2-205ENST00000476983 LMOD1P29536 600 aaPredicted RBP23.17■■□□□ 1.3
CLK2-205ENST00000476983 ADD1P35611 737 aaKnown RBP23.17■■□□□ 1.3
CLK2-205ENST00000476983 RASA3Q14644 834 aa23.17■■□□□ 1.3
CLK2-205ENST00000476983 CATIPQ7Z7H3 387 aa23.17■■□□□ 1.3
CLK2-205ENST00000476983 CPLX1O14810 134 aa23.17■■□□□ 1.3
CLK2-205ENST00000476983 SHROOM1Q2M3G4 852 aaPredicted RBP23.17■■□□□ 1.3
CLK2-205ENST00000476983 FOXD4L5Q5VV16 416 aaPredicted RBP23.17■■□□□ 1.3
CLK2-205ENST00000476983 CLEC10AQ8IUN9 316 aa23.17■■□□□ 1.3
CLK2-205ENST00000476983 FOXD4L4Q8WXT5 416 aaPredicted RBP23.17■■□□□ 1.3
CLK2-205ENST00000476983 CEP95Q96GE4 821 aa23.17■■□□□ 1.3
CLK2-205ENST00000476983 LLPHQ9BRT6 129 aaKnown RBP23.17■■□□□ 1.3
CLK2-205ENST00000476983 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.17■■□□□ 1.3
CLK2-205ENST00000476983 KAT14Q9H8E8 782 aa23.17■■□□□ 1.3
CLK2-205ENST00000476983 PLIN4Q96Q06 1357 aa23.17■■□□□ 1.3
CLK2-205ENST00000476983 CCDC178Q5BJE1 867 aa23.16■■□□□ 1.3
CLK2-205ENST00000476983 ANGEL2Q5VTE6 544 aaKnown RBP23.16■■□□□ 1.3
CLK2-205ENST00000476983 DGKHQ86XP1 1220 aa23.16■■□□□ 1.3
CLK2-205ENST00000476983 SMARCC2Q8TAQ2 1214 aa23.16■■□□□ 1.3
CLK2-205ENST00000476983 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.16■■□□□ 1.3
CLK2-205ENST00000476983 FAM217BQ9NTX9 383 aaPredicted RBP23.16■■□□□ 1.3
CLK2-205ENST00000476983 GREB1LQ9C091 1923 aaPredicted RBP23.15■■□□□ 1.3
CLK2-205ENST00000476983 GDF11O95390 407 aa23.15■■□□□ 1.3
CLK2-205ENST00000476983 HIRAP54198 1017 aaPredicted RBP23.15■■□□□ 1.3
CLK2-205ENST00000476983 TNFAIP1Q13829 316 aa23.15■■□□□ 1.3
CLK2-205ENST00000476983 RTN1Q16799 776 aa23.15■■□□□ 1.3
CLK2-205ENST00000476983 CERKLQ49MI3 558 aaPredicted RBP23.15■■□□□ 1.3
CLK2-205ENST00000476983 METTL16Q86W50 562 aaKnown RBP23.15■■□□□ 1.3
CLK2-205ENST00000476983 CHMP4CQ96CF2 233 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms