RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 DGKZQ13574 1117 aa11.63□□□□□ -0.55
HDAC3-208ENST00000476739 MOGSQ13724 837 aa11.63□□□□□ -0.55
HDAC3-208ENST00000476739 ZNF589Q86UQ0 364 aaPredicted RBP11.63□□□□□ -0.55
HDAC3-208ENST00000476739 REM2Q8IYK8 340 aaPredicted RBP11.63□□□□□ -0.55
HDAC3-208ENST00000476739 IFNL3Q8IZI9 196 aa11.63□□□□□ -0.55
HDAC3-208ENST00000476739 FAM43AQ8N2R8 423 aa11.63□□□□□ -0.55
HDAC3-208ENST00000476739 CCDC136Q96JN2 1154 aa11.63□□□□□ -0.55
HDAC3-208ENST00000476739 TRIM34Q9BYJ4 488 aa11.63□□□□□ -0.55
HDAC3-208ENST00000476739 PTPRFP10586 1907 aa11.62□□□□□ -0.55
HDAC3-208ENST00000476739 TRIM75PA6NK02 468 aa11.62□□□□□ -0.55
HDAC3-208ENST00000476739 BTBD19C9JJ37 291 aa11.62□□□□□ -0.55
HDAC3-208ENST00000476739 GH2P01242 217 aa11.62□□□□□ -0.55
HDAC3-208ENST00000476739 APPP05067 770 aa11.62□□□□□ -0.55
HDAC3-208ENST00000476739 INHBEP58166 350 aa11.62□□□□□ -0.55
HDAC3-208ENST00000476739 SNAPC2Q13487 334 aa11.62□□□□□ -0.55
HDAC3-208ENST00000476739 MCMDC2Q4G0Z9 681 aa11.62□□□□□ -0.55
HDAC3-208ENST00000476739 STK11IPQ8N1F8 1099 aa11.62□□□□□ -0.55
HDAC3-208ENST00000476739 IL25Q9H293 177 aa11.62□□□□□ -0.55
HDAC3-208ENST00000476739 HELLSQ9NRZ9 838 aa11.62□□□□□ -0.55
HDAC3-208ENST00000476739 SAGE1Q9NXZ1 904 aa11.62□□□□□ -0.55
HDAC3-208ENST00000476739 ZBTB21Q9ULJ3 1066 aa11.62□□□□□ -0.55
HDAC3-208ENST00000476739 MINDY4BA8MYZ0 360 aa11.61□□□□□ -0.55
HDAC3-208ENST00000476739 CA12O43570 354 aa11.61□□□□□ -0.55
HDAC3-208ENST00000476739 CETPP11597 493 aa11.61□□□□□ -0.55
HDAC3-208ENST00000476739 GNAT2P19087 354 aa11.61□□□□□ -0.55
HDAC3-208ENST00000476739 GUCY1A2P33402 732 aa11.61□□□□□ -0.55
HDAC3-208ENST00000476739 TDO2P48775 406 aa11.61□□□□□ -0.55
HDAC3-208ENST00000476739 CDK8P49336 464 aa11.61□□□□□ -0.55
HDAC3-208ENST00000476739 SPP2Q13103 211 aa11.61□□□□□ -0.55
HDAC3-208ENST00000476739 CERKLQ49MI3 558 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-208ENST00000476739 SBK1Q52WX2 424 aa11.61□□□□□ -0.55
HDAC3-208ENST00000476739 COL13A1Q5TAT6 717 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-208ENST00000476739 GIMAP6Q6P9H5 292 aa11.61□□□□□ -0.55
HDAC3-208ENST00000476739 ARPP21Q9UBL0 812 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-208ENST00000476739 CASP8AP2Q9UKL3 1982 aa11.61□□□□□ -0.55
HDAC3-208ENST00000476739 A0A0G2JLL6 359 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-208ENST00000476739 USP17L5A8MUK1 530 aa11.6□□□□□ -0.55
HDAC3-208ENST00000476739 CXCL11O14625 94 aa11.6□□□□□ -0.55
HDAC3-208ENST00000476739 ASNSP08243 561 aa11.6□□□□□ -0.55
HDAC3-208ENST00000476739 AKR1B1P15121 316 aa11.6□□□□□ -0.55
HDAC3-208ENST00000476739 ABCB5Q2M3G0 1257 aa11.6□□□□□ -0.55
HDAC3-208ENST00000476739 GPAT2Q6NUI2 795 aa11.6□□□□□ -0.55
HDAC3-208ENST00000476739 CWC27Q6UX04 472 aaKnown RBP11.6□□□□□ -0.55
HDAC3-208ENST00000476739 C16orf86Q6ZW13 317 aa11.6□□□□□ -0.55
HDAC3-208ENST00000476739 PRRT2Q7Z6L0 340 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-208ENST00000476739 ZNF280CQ8ND82 737 aa11.6□□□□□ -0.55
HDAC3-208ENST00000476739 DDRGK1Q96HY6 314 aa11.6□□□□□ -0.55
HDAC3-208ENST00000476739 MYH8P13535 1937 aa11.6□□□□□ -0.55
HDAC3-208ENST00000476739 HSPD1P10809 573 aaKnown RBP11.59□□□□□ -0.55
HDAC3-208ENST00000476739 CRHR2Q13324 411 aa11.59□□□□□ -0.55
HDAC3-208ENST00000476739 SEPT2Q15019 361 aa11.59□□□□□ -0.55
HDAC3-208ENST00000476739 RAB3GAP1Q15042 981 aa11.59□□□□□ -0.55
HDAC3-208ENST00000476739 TICAM2Q86XR7 235 aa11.59□□□□□ -0.55
HDAC3-208ENST00000476739 CLEC10AQ8IUN9 316 aa11.59□□□□□ -0.55
HDAC3-208ENST00000476739 CFHR5Q9BXR6 569 aa11.59□□□□□ -0.55
HDAC3-208ENST00000476739 NAPBQ9H115 298 aa11.59□□□□□ -0.55
HDAC3-208ENST00000476739 INCENPQ9NQS7 918 aa11.59□□□□□ -0.55
HDAC3-208ENST00000476739 SWAP70Q9UH65 585 aa11.59□□□□□ -0.55
HDAC3-208ENST00000476739 TACC3Q9Y6A5 838 aa11.59□□□□□ -0.55
HDAC3-208ENST00000476739 CCDC171Q6TFL3 1326 aa11.59□□□□□ -0.55
HDAC3-208ENST00000476739 ROBO3Q96MS0 1386 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 PDHXO00330 501 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 MPHOSPH10O00566 681 aaKnown RBP11.58□□□□□ -0.56
HDAC3-208ENST00000476739 PRDM1O75626 825 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 ALDH1A1P00352 501 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 HMGCS2P54868 508 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 PPARAQ07869 468 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 MTMR2Q13614 643 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 TREML2Q5T2D2 321 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 OTUD7BQ6GQQ9 843 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 GADL1Q6ZQY3 521 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 ANKRD23Q86SG2 305 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 AMOTL1Q8IY63 956 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 ACER1Q8TDN7 264 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 WDR18Q9BV38 432 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 NACAP1Q9BZK3 213 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 AS3MTQ9HBK9 375 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 PRDM10Q9NQV6 1147 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 DIAPH3Q9NSV4 1193 aa11.58□□□□□ -0.56
HDAC3-208ENST00000476739 LOC285556D6RIA3 1793 aa11.57□□□□□ -0.56
HDAC3-208ENST00000476739 A0A1W2PRG0 241 aa11.57□□□□□ -0.56
HDAC3-208ENST00000476739 GPR25O00155 361 aa11.57□□□□□ -0.56
HDAC3-208ENST00000476739 FGAP02671 866 aa11.57□□□□□ -0.56
HDAC3-208ENST00000476739 CYP2C8P10632 490 aa11.57□□□□□ -0.56
HDAC3-208ENST00000476739 RASA1P20936 1047 aa11.57□□□□□ -0.56
HDAC3-208ENST00000476739 CHMLP26374 656 aa11.57□□□□□ -0.56
HDAC3-208ENST00000476739 BACE1P56817 501 aa11.57□□□□□ -0.56
HDAC3-208ENST00000476739 CAP1Q01518 475 aa11.57□□□□□ -0.56
HDAC3-208ENST00000476739 CTDSPL2Q05D32 466 aa11.57□□□□□ -0.56
HDAC3-208ENST00000476739 TAF1CQ15572 869 aaPredicted RBP11.57□□□□□ -0.56
HDAC3-208ENST00000476739 SIAH1Q8IUQ4 282 aa11.57□□□□□ -0.56
HDAC3-208ENST00000476739 ZNF296Q8WUU4 475 aaPredicted RBP11.57□□□□□ -0.56
HDAC3-208ENST00000476739 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.57□□□□□ -0.56
HDAC3-208ENST00000476739 CABP5Q9NP86 173 aa11.57□□□□□ -0.56
HDAC3-208ENST00000476739 GINM1Q9NU53 330 aa11.57□□□□□ -0.56
HDAC3-208ENST00000476739 PPP4R2Q9NY27 417 aa11.57□□□□□ -0.56
HDAC3-208ENST00000476739 USP17L10C9JJH3 530 aa11.56□□□□□ -0.56
HDAC3-208ENST00000476739 HIP1O00291 1037 aa11.56□□□□□ -0.56
HDAC3-208ENST00000476739 ALX1Q15699 326 aa11.56□□□□□ -0.56
HDAC3-208ENST00000476739 ZYXQ15942 572 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms