RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	ZNF112	Q9UJU3	913 aa		9.23	□□□□□ -0.93
HDAC9-223	ENST00000476135	HCN4	Q9Y3Q4	1203 aa		9.23	□□□□□ -0.93
HDAC9-223	ENST00000476135	BDP1	A6H8Y1	2624 aa		9.23	□□□□□ -0.93
HDAC9-223	ENST00000476135	CLSPN	Q9HAW4	1339 aa		9.23	□□□□□ -0.93
HDAC9-223	ENST00000476135	RPAP1	Q9BWH6	1393 aa	Predicted RBP	9.23	□□□□□ -0.93
HDAC9-223	ENST00000476135		A0A1B0GUL6	1792 aa		9.22	□□□□□ -0.93
HDAC9-223	ENST00000476135	MAST2	Q6P0Q8	1798 aa		9.22	□□□□□ -0.93
HDAC9-223	ENST00000476135	LTBP2	Q14767	1821 aa		9.22	□□□□□ -0.93
HDAC9-223	ENST00000476135	TULP1	O00294	542 aa	Predicted RBP	9.22	□□□□□ -0.93
HDAC9-223	ENST00000476135	NRG2	O14511	850 aa	Predicted RBP	9.22	□□□□□ -0.93
HDAC9-223	ENST00000476135	SHH	Q15465	462 aa		9.22	□□□□□ -0.93
HDAC9-223	ENST00000476135	MFSD14B	Q5SR56	506 aa		9.22	□□□□□ -0.93
HDAC9-223	ENST00000476135	NOL9	Q5SY16	702 aa	Known RBP	9.22	□□□□□ -0.93
HDAC9-223	ENST00000476135	ASB2	Q96Q27	587 aa		9.22	□□□□□ -0.93
HDAC9-223	ENST00000476135	UHRF1	Q96T88	793 aa	Predicted RBP	9.22	□□□□□ -0.93
HDAC9-223	ENST00000476135	JAG2	Q9Y219	1238 aa		9.22	□□□□□ -0.93
HDAC9-223	ENST00000476135	PIEZO1	Q92508	2521 aa		9.22	□□□□□ -0.93
HDAC9-223	ENST00000476135	CDH23	Q9H251	3354 aa		9.21	□□□□□ -0.93
HDAC9-223	ENST00000476135	SNAP23	O00161	211 aa		9.21	□□□□□ -0.94
HDAC9-223	ENST00000476135	ITGA6	P23229	1130 aa		9.21	□□□□□ -0.94
HDAC9-223	ENST00000476135	HDLBP	Q00341	1268 aa	Known RBP	9.21	□□□□□ -0.94
HDAC9-223	ENST00000476135	TRIM32	Q13049	653 aa		9.21	□□□□□ -0.94
HDAC9-223	ENST00000476135	MAP3K21	Q5TCX8	1036 aa		9.21	□□□□□ -0.94
HDAC9-223	ENST00000476135	PHAX	Q9H814	394 aa	Known RBP	9.21	□□□□□ -0.94
HDAC9-223	ENST00000476135	TMOD2	Q9NZR1	351 aa		9.21	□□□□□ -0.94
HDAC9-223	ENST00000476135		A0A0G2JLL6	359 aa	Predicted RBP	9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	TAF5L	O75529	589 aa		9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	DDX58	O95786	925 aa	Known RBP	9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	CACNB3	P54284	484 aa		9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	FAM110C	Q1W6H9	321 aa		9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	TRAF7	Q6Q0C0	670 aa		9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	MIGA2	Q7L4E1	593 aa		9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	PRRT2	Q7Z6L0	340 aa	Predicted RBP	9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	TDRD7	Q8NHU6	1098 aa	Known RBP	9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	SMCR8	Q8TEV9	937 aa	Predicted RBP	9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	EMID1	Q96A84	441 aa	Predicted RBP	9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	PLA2G12B	Q9BX93	195 aa		9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	THEG	Q9P2T0	379 aa		9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	PRKAG2	Q9UGJ0	569 aa		9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	GJD2	Q9UKL4	321 aa		9.2	□□□□□ -0.94
HDAC9-223	ENST00000476135	PLXNB2	O15031	1838 aa		9.19	□□□□□ -0.94
HDAC9-223	ENST00000476135	IGKV5-2	P06315	115 aa		9.19	□□□□□ -0.94
HDAC9-223	ENST00000476135	CSF1R	P07333	972 aa		9.19	□□□□□ -0.94
HDAC9-223	ENST00000476135	MRPS5	P82675	430 aa	Known RBP	9.19	□□□□□ -0.94
HDAC9-223	ENST00000476135	C9orf50	Q5SZB4	431 aa		9.19	□□□□□ -0.94
HDAC9-223	ENST00000476135	DUSP27	Q5VZP5	1158 aa		9.19	□□□□□ -0.94
HDAC9-223	ENST00000476135	CCER1	Q8TC90	406 aa	Predicted RBP	9.19	□□□□□ -0.94
HDAC9-223	ENST00000476135	MRI	Q9BWK5	157 aa		9.19	□□□□□ -0.94
HDAC9-223	ENST00000476135	PTPRF	P10586	1907 aa		9.19	□□□□□ -0.94
HDAC9-223	ENST00000476135	AK9	Q5TCS8	1911 aa		9.19	□□□□□ -0.94
HDAC9-223	ENST00000476135		H7C1W4	665 aa		9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	NR1I2	O75469	434 aa		9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	S1PR4	O95977	384 aa		9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	ADH1B	P00325	375 aa		9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	TMPO	P42166	694 aa	Known RBP	9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	GRIN2C	Q14957	1233 aa		9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	GADL1	Q6ZQY3	521 aa		9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	DNAH12	Q6ZR08	3092 aa		9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	ALYREF	Q86V81	257 aa	Known RBP	9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	ANKRD13C	Q8N6S4	541 aa		9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	IL27	Q8NEV9	243 aa		9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	TRIB2	Q92519	343 aa		9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	TEKT1	Q969V4	418 aa		9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	ZDHHC15	Q96MV8	337 aa		9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	LRFN3	Q9BTN0	628 aa		9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	LAS1L	Q9Y4W2	734 aa	Known RBP	9.18	□□□□□ -0.94
HDAC9-223	ENST00000476135	ANKRD18B	A2A2Z9	1011 aa		9.17	□□□□□ -0.94
HDAC9-223	ENST00000476135	SLC19A1	P41440	591 aa		9.17	□□□□□ -0.94
HDAC9-223	ENST00000476135	AKNAD1	Q5T1N1	836 aa		9.17	□□□□□ -0.94
HDAC9-223	ENST00000476135	TRMT44	Q8IYL2	757 aa	Known RBP	9.17	□□□□□ -0.94
HDAC9-223	ENST00000476135	FAM151A	Q8WW52	585 aa		9.17	□□□□□ -0.94
HDAC9-223	ENST00000476135	MAP3K2	Q9Y2U5	619 aa		9.17	□□□□□ -0.94
HDAC9-223	ENST00000476135	AFG3L2	Q9Y4W6	797 aa		9.17	□□□□□ -0.94
HDAC9-223	ENST00000476135	FRMPD3	Q5JV73	1810 aa		9.17	□□□□□ -0.94
HDAC9-223	ENST00000476135	XRCC5	P13010	732 aa	Known RBP	9.16	□□□□□ -0.94
HDAC9-223	ENST00000476135	HIBADH	P31937	336 aa	Known RBP	9.16	□□□□□ -0.94
HDAC9-223	ENST00000476135	GCLC	P48506	637 aa	Predicted RBP	9.16	□□□□□ -0.94
HDAC9-223	ENST00000476135	NEXN	Q0ZGT2	675 aa		9.16	□□□□□ -0.94
HDAC9-223	ENST00000476135	PUS10	Q3MIT2	529 aa	Known RBP	9.16	□□□□□ -0.94
HDAC9-223	ENST00000476135	APOBEC3H	Q6NTF7	200 aa	Known RBP	9.16	□□□□□ -0.94
HDAC9-223	ENST00000476135	UBE3B	Q7Z3V4	1068 aa		9.16	□□□□□ -0.94
HDAC9-223	ENST00000476135	SCUBE3	Q8IX30	993 aa		9.16	□□□□□ -0.94
HDAC9-223	ENST00000476135	NLRP7	Q8WX94	980 aa		9.16	□□□□□ -0.94
HDAC9-223	ENST00000476135	SENP6	Q9GZR1	1112 aa	Predicted RBP	9.16	□□□□□ -0.94
HDAC9-223	ENST00000476135	AGTPBP1	Q9UPW5	1226 aa		9.16	□□□□□ -0.94
HDAC9-223	ENST00000476135	ZHX2	Q9Y6X8	837 aa		9.16	□□□□□ -0.94
HDAC9-223	ENST00000476135	PHIP	Q8WWQ0	1821 aa		9.15	□□□□□ -0.94
HDAC9-223	ENST00000476135	NEURL1B	A8MQ27	555 aa		9.15	□□□□□ -0.94
HDAC9-223	ENST00000476135	PTPRA	P18433	802 aa		9.15	□□□□□ -0.94
HDAC9-223	ENST00000476135	RTP1	P59025	263 aa		9.15	□□□□□ -0.94
HDAC9-223	ENST00000476135	CACNB2	Q08289	660 aa	Predicted RBP	9.15	□□□□□ -0.94
HDAC9-223	ENST00000476135	PDE3A	Q14432	1141 aa		9.15	□□□□□ -0.94
HDAC9-223	ENST00000476135	GRIK5	Q16478	980 aa		9.15	□□□□□ -0.94
HDAC9-223	ENST00000476135	KSR2	Q6VAB6	950 aa		9.15	□□□□□ -0.94
HDAC9-223	ENST00000476135	TRIM67	Q6ZTA4	783 aa		9.15	□□□□□ -0.94
HDAC9-223	ENST00000476135	SCYL3	Q8IZE3	742 aa		9.15	□□□□□ -0.94
HDAC9-223	ENST00000476135	TBC1D22A	Q8WUA7	517 aa		9.15	□□□□□ -0.94
HDAC9-223	ENST00000476135	FAM84B	Q96KN1	310 aa	Predicted RBP	9.15	□□□□□ -0.94
HDAC9-223	ENST00000476135	P2RX7	Q99572	595 aa	Known RBP	9.15	□□□□□ -0.94
HDAC9-223	ENST00000476135	PICK1	Q9NRD5	415 aa		9.15	□□□□□ -0.94

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