RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 CTR9Q6PD62 1173 aa19.46■□□□□ 0.71
SRM-204ENST00000475189 PRDM10Q9NQV6 1147 aa19.46■□□□□ 0.71
SRM-204ENST00000475189 PATL2C9JE40 543 aaKnown RBP19.45■□□□□ 0.7
SRM-204ENST00000475189 SMIM22K7EJ46 135 aa19.45■□□□□ 0.7
SRM-204ENST00000475189 TBC1D8O95759 1140 aa19.45■□□□□ 0.7
SRM-204ENST00000475189 TTC22Q5TAA0 569 aa19.45■□□□□ 0.7
SRM-204ENST00000475189 OTUD7BQ6GQQ9 843 aa19.45■□□□□ 0.7
SRM-204ENST00000475189 CCDC129Q6ZRS4 1044 aa19.45■□□□□ 0.7
SRM-204ENST00000475189 FAM227BQ96M60 508 aa19.45■□□□□ 0.7
SRM-204ENST00000475189 CFHR5Q9BXR6 569 aa19.45■□□□□ 0.7
SRM-204ENST00000475189 EPB41L4AQ9HCS5 686 aaPredicted RBP19.45■□□□□ 0.7
SRM-204ENST00000475189 HELLSQ9NRZ9 838 aa19.45■□□□□ 0.7
SRM-204ENST00000475189 GINM1Q9NU53 330 aa19.45■□□□□ 0.7
SRM-204ENST00000475189 A0A0D9SFI3 127 aa19.44■□□□□ 0.7
SRM-204ENST00000475189 USP17L5A8MUK1 530 aa19.44■□□□□ 0.7
SRM-204ENST00000475189 ASNSP08243 561 aa19.44■□□□□ 0.7
SRM-204ENST00000475189 GSPT1P15170 499 aaKnown RBP19.44■□□□□ 0.7
SRM-204ENST00000475189 SDSP20132 328 aa19.44■□□□□ 0.7
SRM-204ENST00000475189 NMIQ13287 307 aaPredicted RBP19.44■□□□□ 0.7
SRM-204ENST00000475189 MOGSQ13724 837 aa19.44■□□□□ 0.7
SRM-204ENST00000475189 SBK1Q52WX2 424 aa19.44■□□□□ 0.7
SRM-204ENST00000475189 AMOTL1Q8IY63 956 aa19.44■□□□□ 0.7
SRM-204ENST00000475189 FAM43AQ8N2R8 423 aa19.44■□□□□ 0.7
SRM-204ENST00000475189 DYNLL2Q96FJ2 89 aa19.44■□□□□ 0.7
SRM-204ENST00000475189 R3HDMLQ9H3Y0 253 aa19.44■□□□□ 0.7
SRM-204ENST00000475189 ARPP21Q9UBL0 812 aaPredicted RBP19.44■□□□□ 0.7
SRM-204ENST00000475189 ZBTB21Q9ULJ3 1066 aa19.44■□□□□ 0.7
SRM-204ENST00000475189 A0A0G2JLL6 359 aaPredicted RBP19.43■□□□□ 0.7
SRM-204ENST00000475189 BTBD19C9JJ37 291 aa19.43■□□□□ 0.7
SRM-204ENST00000475189 APPP05067 770 aa19.43■□□□□ 0.7
SRM-204ENST00000475189 CERKLQ49MI3 558 aaPredicted RBP19.43■□□□□ 0.7
SRM-204ENST00000475189 PRRT2Q7Z6L0 340 aaPredicted RBP19.43■□□□□ 0.7
SRM-204ENST00000475189 IFNL3Q8IZI9 196 aa19.43■□□□□ 0.7
SRM-204ENST00000475189 SLC44A5Q8NCS7 719 aa19.43■□□□□ 0.7
SRM-204ENST00000475189 TBC1D2Q9BYX2 928 aa19.43■□□□□ 0.7
SRM-204ENST00000475189 TAOK2Q9UL54 1235 aa19.43■□□□□ 0.7
SRM-204ENST00000475189 TRIM75PA6NK02 468 aa19.42■□□□□ 0.7
SRM-204ENST00000475189 FOXP2O15409 715 aa19.42■□□□□ 0.7
SRM-204ENST00000475189 CAPN15O75808 1086 aa19.42■□□□□ 0.7
SRM-204ENST00000475189 GH2P01242 217 aa19.42■□□□□ 0.7
SRM-204ENST00000475189 MCMDC2Q4G0Z9 681 aa19.42■□□□□ 0.7
SRM-204ENST00000475189 ZNF280CQ8ND82 737 aa19.42■□□□□ 0.7
SRM-204ENST00000475189 CCDC136Q96JN2 1154 aa19.42■□□□□ 0.7
SRM-204ENST00000475189 SWAP70Q9UH65 585 aa19.42■□□□□ 0.7
SRM-204ENST00000475189 TDO2P48775 406 aa19.41■□□□□ 0.7
SRM-204ENST00000475189 CDK8P49336 464 aa19.41■□□□□ 0.7
SRM-204ENST00000475189 SPP2Q13103 211 aa19.41■□□□□ 0.7
SRM-204ENST00000475189 ABCB5Q2M3G0 1257 aa19.41■□□□□ 0.7
SRM-204ENST00000475189 C16orf86Q6ZW13 317 aa19.41■□□□□ 0.7
SRM-204ENST00000475189 WDR18Q9BV38 432 aa19.41■□□□□ 0.7
SRM-204ENST00000475189 NACAP1Q9BZK3 213 aa19.41■□□□□ 0.7
SRM-204ENST00000475189 AS3MTQ9HBK9 375 aa19.41■□□□□ 0.7
SRM-204ENST00000475189 LOC285556D6RIA3 1793 aa19.4■□□□□ 0.7
SRM-204ENST00000475189 MINDY4BA8MYZ0 360 aa19.4■□□□□ 0.7
SRM-204ENST00000475189 CRHR2Q13324 411 aa19.4■□□□□ 0.7
SRM-204ENST00000475189 VPS53Q5VIR6 699 aa19.4■□□□□ 0.7
SRM-204ENST00000475189 GPAT2Q6NUI2 795 aa19.4■□□□□ 0.7
SRM-204ENST00000475189 ANKRD23Q86SG2 305 aa19.4■□□□□ 0.7
SRM-204ENST00000475189 ZCCHC17Q9NP64 241 aaKnown RBP19.4■□□□□ 0.7
SRM-204ENST00000475189 HIP1O00291 1037 aa19.39■□□□□ 0.69
SRM-204ENST00000475189 GUCY1A2P33402 732 aa19.39■□□□□ 0.69
SRM-204ENST00000475189 TAF1CQ15572 869 aaPredicted RBP19.39■□□□□ 0.69
SRM-204ENST00000475189 NOM1Q5C9Z4 860 aaKnown RBP19.39■□□□□ 0.69
SRM-204ENST00000475189 GADL1Q6ZQY3 521 aa19.39■□□□□ 0.69
SRM-204ENST00000475189 FASTKD5Q7L8L6 764 aaKnown RBP19.39■□□□□ 0.69
SRM-204ENST00000475189 ZNF589Q86UQ0 364 aaPredicted RBP19.39■□□□□ 0.69
SRM-204ENST00000475189 CABP5Q9NP86 173 aa19.39■□□□□ 0.69
SRM-204ENST00000475189 ROBO3Q96MS0 1386 aa19.39■□□□□ 0.69
SRM-204ENST00000475189 GPR25O00155 361 aa19.38■□□□□ 0.69
SRM-204ENST00000475189 RAB3GAP1Q15042 981 aa19.38■□□□□ 0.69
SRM-204ENST00000475189 SH3D19Q5HYK7 790 aa19.38■□□□□ 0.69
SRM-204ENST00000475189 SKAP1Q86WV1 359 aa19.38■□□□□ 0.69
SRM-204ENST00000475189 NAPBQ9H115 298 aa19.38■□□□□ 0.69
SRM-204ENST00000475189 DIAPH3Q9NSV4 1193 aa19.38■□□□□ 0.69
SRM-204ENST00000475189 CCDC171Q6TFL3 1326 aa19.37■□□□□ 0.69
SRM-204ENST00000475189 PDHXO00330 501 aa19.37■□□□□ 0.69
SRM-204ENST00000475189 AKR1B1P15121 316 aa19.37■□□□□ 0.69
SRM-204ENST00000475189 HMGCS2P54868 508 aa19.37■□□□□ 0.69
SRM-204ENST00000475189 BACE1P56817 501 aa19.37■□□□□ 0.69
SRM-204ENST00000475189 SEPT2Q15019 361 aa19.37■□□□□ 0.69
SRM-204ENST00000475189 ALX1Q15699 326 aa19.37■□□□□ 0.69
SRM-204ENST00000475189 CWC27Q6UX04 472 aaKnown RBP19.37■□□□□ 0.69
SRM-204ENST00000475189 ZNF296Q8WUU4 475 aaPredicted RBP19.37■□□□□ 0.69
SRM-204ENST00000475189 ZFYVE28Q9HCC9 887 aa19.37■□□□□ 0.69
SRM-204ENST00000475189 USP17L10C9JJH3 530 aa19.36■□□□□ 0.69
SRM-204ENST00000475189 MPHOSPH10O00566 681 aaKnown RBP19.36■□□□□ 0.69
SRM-204ENST00000475189 HSPD1P10809 573 aaKnown RBP19.36■□□□□ 0.69
SRM-204ENST00000475189 DGKZQ13574 1117 aa19.36■□□□□ 0.69
SRM-204ENST00000475189 MTMR2Q13614 643 aa19.36■□□□□ 0.69
SRM-204ENST00000475189 ERICH6BQ5W0A0 696 aa19.36■□□□□ 0.69
SRM-204ENST00000475189 STK11IPQ8N1F8 1099 aa19.36■□□□□ 0.69
SRM-204ENST00000475189 PROCA1Q8NCQ7 364 aaPredicted RBP19.36■□□□□ 0.69
SRM-204ENST00000475189 CCDC17Q96LX7 622 aa19.36■□□□□ 0.69
SRM-204ENST00000475189 GREB1LQ9C091 1923 aaPredicted RBP19.35■□□□□ 0.69
SRM-204ENST00000475189 C19orf81C9J6K1 198 aa19.35■□□□□ 0.69
SRM-204ENST00000475189 MFAP1P55081 439 aaKnown RBP19.35■□□□□ 0.69
SRM-204ENST00000475189 TREML2Q5T2D2 321 aa19.35■□□□□ 0.69
SRM-204ENST00000475189 TMEM179Q6ZVK1 233 aa19.35■□□□□ 0.69
SRM-204ENST00000475189 AGTPBP1Q9UPW5 1226 aa19.35■□□□□ 0.69
SRM-204ENST00000475189 SLC45A1Q9Y2W3 748 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms