RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 NT5C2P49902 561 aa23.79■■□□□ 1.4
EDEM3-206ENST00000474725 ENAHQ8N8S7 591 aaPredicted RBP23.79■■□□□ 1.4
EDEM3-206ENST00000474725 VEZTQ9HBM0 779 aa23.79■■□□□ 1.4
EDEM3-206ENST00000474725 MYO1BO43795 1136 aa23.78■■□□□ 1.4
EDEM3-206ENST00000474725 C9orf131Q5VYM1 1079 aa23.78■■□□□ 1.4
EDEM3-206ENST00000474725 APOA5Q6Q788 366 aa23.78■■□□□ 1.4
EDEM3-206ENST00000474725 SAMD7Q7Z3H4 446 aa23.78■■□□□ 1.4
EDEM3-206ENST00000474725 GPC2Q8N158 579 aa23.78■■□□□ 1.4
EDEM3-206ENST00000474725 TMTC2Q8N394 836 aa23.78■■□□□ 1.4
EDEM3-206ENST00000474725 SLURP2P0DP57 97 aa23.78■■□□□ 1.4
EDEM3-206ENST00000474725 EHD4Q9H223 541 aa23.78■■□□□ 1.4
EDEM3-206ENST00000474725 PI4KBQ9UBF8 816 aa23.78■■□□□ 1.4
EDEM3-206ENST00000474725 SLC12A7Q9Y666 1083 aa23.78■■□□□ 1.4
EDEM3-206ENST00000474725 TSPY3P0CV98 308 aa23.77■■□□□ 1.4
EDEM3-206ENST00000474725 TSPY8P0CW00 308 aa23.77■■□□□ 1.4
EDEM3-206ENST00000474725 GJB2P29033 226 aa23.77■■□□□ 1.4
EDEM3-206ENST00000474725 TBC1D10BQ4KMP7 808 aaPredicted RBP23.77■■□□□ 1.4
EDEM3-206ENST00000474725 MYL10Q9BUA6 226 aa23.77■■□□□ 1.4
EDEM3-206ENST00000474725 IL17RBQ9NRM6 502 aa23.77■■□□□ 1.4
EDEM3-206ENST00000474725 SWAP70Q9UH65 585 aa23.77■■□□□ 1.4
EDEM3-206ENST00000474725 RXRAP19793 462 aa23.76■■□□□ 1.39
EDEM3-206ENST00000474725 IFIT1BQ5T764 474 aaKnown RBP23.76■■□□□ 1.39
EDEM3-206ENST00000474725 FAM151AQ8WW52 585 aa23.76■■□□□ 1.39
EDEM3-206ENST00000474725 CNTNAP1P78357 1384 aa23.76■■□□□ 1.39
EDEM3-206ENST00000474725 ATRNL1Q5VV63 1379 aa23.76■■□□□ 1.39
EDEM3-206ENST00000474725 ZBTB43O43298 467 aa23.76■■□□□ 1.39
EDEM3-206ENST00000474725 FKBP1CQ5VVH2 108 aa23.76■■□□□ 1.39
EDEM3-206ENST00000474725 SIPA1L1O43166 1804 aa23.75■■□□□ 1.39
EDEM3-206ENST00000474725 H7C1D1 291 aa23.75■■□□□ 1.39
EDEM3-206ENST00000474725 CTDNEP1O95476 244 aa23.75■■□□□ 1.39
EDEM3-206ENST00000474725 SHMT1P34896 483 aa23.75■■□□□ 1.39
EDEM3-206ENST00000474725 SYNE3Q6ZMZ3 975 aa23.75■■□□□ 1.39
EDEM3-206ENST00000474725 MICU3Q86XE3 530 aa23.75■■□□□ 1.39
EDEM3-206ENST00000474725 CRACR2BQ8N4Y2 399 aaPredicted RBP23.75■■□□□ 1.39
EDEM3-206ENST00000474725 TCP11L1Q9NUJ3 509 aa23.75■■□□□ 1.39
EDEM3-206ENST00000474725 GPRC5DQ9NZD1 345 aa23.75■■□□□ 1.39
EDEM3-206ENST00000474725 COL2A1P02458 1487 aaPredicted RBP23.75■■□□□ 1.39
EDEM3-206ENST00000474725 JAK2O60674 1132 aa23.74■■□□□ 1.39
EDEM3-206ENST00000474725 DDNO94850 711 aaPredicted RBP23.74■■□□□ 1.39
EDEM3-206ENST00000474725 METAP2P50579 478 aaKnown RBP eCLIP23.74■■□□□ 1.39
EDEM3-206ENST00000474725 PKP1Q13835 747 aa23.74■■□□□ 1.39
EDEM3-206ENST00000474725 KIF4BQ2VIQ3 1234 aa23.74■■□□□ 1.39
EDEM3-206ENST00000474725 LLPHQ9BRT6 129 aaKnown RBP23.74■■□□□ 1.39
EDEM3-206ENST00000474725 DNAJC18Q9H819 358 aa23.74■■□□□ 1.39
EDEM3-206ENST00000474725 RCSD1Q6JBY9 416 aa23.74■■□□□ 1.39
EDEM3-206ENST00000474725 FOXP4Q8IVH2 680 aaPredicted RBP23.74■■□□□ 1.39
EDEM3-206ENST00000474725 CCDC144CPQ8IYA2 1237 aa23.74■■□□□ 1.39
EDEM3-206ENST00000474725 ZNF654Q8IZM8 581 aa23.74■■□□□ 1.39
EDEM3-206ENST00000474725 NSUN7Q8NE18 718 aaKnown RBP23.74■■□□□ 1.39
EDEM3-206ENST00000474725 NEDD1Q8NHV4 660 aa23.74■■□□□ 1.39
EDEM3-206ENST00000474725 SRCAPQ6ZRS2 3230 aa23.73■■□□□ 1.39
EDEM3-206ENST00000474725 FAM196BA6NMK8 535 aa23.73■■□□□ 1.39
EDEM3-206ENST00000474725 GOLGA8AA7E2F4 631 aa23.72■■□□□ 1.39
EDEM3-206ENST00000474725 CCDC178Q5BJE1 867 aa23.72■■□□□ 1.39
EDEM3-206ENST00000474725 FAM83AQ86UY5 434 aa23.72■■□□□ 1.39
EDEM3-206ENST00000474725 SMARCC2Q8TAQ2 1214 aa23.72■■□□□ 1.39
EDEM3-206ENST00000474725 CHMP4CQ96CF2 233 aa23.72■■□□□ 1.39
EDEM3-206ENST00000474725 CSRNP1Q96S65 589 aa23.72■■□□□ 1.39
EDEM3-206ENST00000474725 ASTN2O75129 1339 aaPredicted RBP23.72■■□□□ 1.39
EDEM3-206ENST00000474725 AKR1B1P15121 316 aa23.72■■□□□ 1.39
EDEM3-206ENST00000474725 CDC27P30260 824 aa23.72■■□□□ 1.39
EDEM3-206ENST00000474725 NUCB2P80303 420 aa23.72■■□□□ 1.39
EDEM3-206ENST00000474725 METTL16Q86W50 562 aaKnown RBP23.72■■□□□ 1.39
EDEM3-206ENST00000474725 DGKHQ86XP1 1220 aa23.72■■□□□ 1.39
EDEM3-206ENST00000474725 ANKS1AQ92625 1134 aa23.72■■□□□ 1.39
EDEM3-206ENST00000474725 TRIM34Q9BYJ4 488 aa23.72■■□□□ 1.39
EDEM3-206ENST00000474725 TMEM39BQ9GZU3 492 aa23.72■■□□□ 1.39
EDEM3-206ENST00000474725 SCAF8Q9UPN6 1271 aaKnown RBP23.72■■□□□ 1.39
EDEM3-206ENST00000474725 DHX16O60231 1041 aaKnown RBP23.71■■□□□ 1.39
EDEM3-206ENST00000474725 GRIN3BO60391 1043 aa23.71■■□□□ 1.39
EDEM3-206ENST00000474725 ADD1P35611 737 aaKnown RBP23.71■■□□□ 1.39
EDEM3-206ENST00000474725 EPS15P42566 896 aa23.71■■□□□ 1.39
EDEM3-206ENST00000474725 RAB3GAP1Q15042 981 aa23.71■■□□□ 1.39
EDEM3-206ENST00000474725 NUP133Q8WUM0 1156 aa23.71■■□□□ 1.39
EDEM3-206ENST00000474725 DDX11Q96FC9 970 aa23.71■■□□□ 1.39
EDEM3-206ENST00000474725 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.71■■□□□ 1.39
EDEM3-206ENST00000474725 FAM217BQ9NTX9 383 aaPredicted RBP23.71■■□□□ 1.39
EDEM3-206ENST00000474725 PTPDC1A2A3K4 754 aa23.71■■□□□ 1.39
EDEM3-206ENST00000474725 NFKBIBQ15653 356 aa23.71■■□□□ 1.39
EDEM3-206ENST00000474725 CATIPQ7Z7H3 387 aa23.71■■□□□ 1.39
EDEM3-206ENST00000474725 TRPM4Q8TD43 1214 aa23.71■■□□□ 1.39
EDEM3-206ENST00000474725 UTRNP46939 3433 aa23.7■■□□□ 1.39
EDEM3-206ENST00000474725 PPFIA3O75145 1194 aa23.7■■□□□ 1.38
EDEM3-206ENST00000474725 HACL1Q9UJ83 578 aa23.7■■□□□ 1.38
EDEM3-206ENST00000474725 ZDHHC9Q9Y397 364 aa23.7■■□□□ 1.38
EDEM3-206ENST00000474725 NID2Q14112 1375 aa23.69■■□□□ 1.38
EDEM3-206ENST00000474725 CPLX1O14810 134 aa23.69■■□□□ 1.38
EDEM3-206ENST00000474725 TNNI2P48788 182 aa23.69■■□□□ 1.38
EDEM3-206ENST00000474725 CDAN1Q8IWY9 1227 aa23.69■■□□□ 1.38
EDEM3-206ENST00000474725 CEP95Q96GE4 821 aa23.69■■□□□ 1.38
EDEM3-206ENST00000474725 TAOK2Q9UL54 1235 aa23.69■■□□□ 1.38
EDEM3-206ENST00000474725 MYH8P13535 1937 aa23.69■■□□□ 1.38
EDEM3-206ENST00000474725 SYT1P21579 422 aa23.69■■□□□ 1.38
EDEM3-206ENST00000474725 RCAN1P53805 252 aa23.69■■□□□ 1.38
EDEM3-206ENST00000474725 TATDN1Q6P1N9 297 aa23.69■■□□□ 1.38
EDEM3-206ENST00000474725 FANCBQ8NB91 859 aa23.69■■□□□ 1.38
EDEM3-206ENST00000474725 KAT14Q9H8E8 782 aa23.69■■□□□ 1.38
EDEM3-206ENST00000474725 PGAP2Q9UHJ9 254 aa23.69■■□□□ 1.38
EDEM3-206ENST00000474725 STX8Q9UNK0 236 aa23.69■■□□□ 1.38
EDEM3-206ENST00000474725 PLIN4Q96Q06 1357 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms