RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 LIFRP42702 1097 aa23.94■■□□□ 1.42
CDHR3-210ENST00000474330 CACNB3P54284 484 aa23.94■■□□□ 1.42
CDHR3-210ENST00000474330 SART3Q15020 963 aaKnown RBP23.94■■□□□ 1.42
CDHR3-210ENST00000474330 GLIS2Q9BZE0 524 aaPredicted RBP23.94■■□□□ 1.42
CDHR3-210ENST00000474330 DHX36Q9H2U1 1008 aaKnown RBP23.94■■□□□ 1.42
CDHR3-210ENST00000474330 TMEM88BA6NKF7 163 aa23.93■■□□□ 1.42
CDHR3-210ENST00000474330 IFIT3O14879 490 aaKnown RBP23.93■■□□□ 1.42
CDHR3-210ENST00000474330 MYO1BO43795 1136 aa23.93■■□□□ 1.42
CDHR3-210ENST00000474330 ST3GAL1Q11201 340 aa23.93■■□□□ 1.42
CDHR3-210ENST00000474330 KIF4BQ2VIQ3 1234 aa23.93■■□□□ 1.42
CDHR3-210ENST00000474330 CST9Q5W186 159 aa23.93■■□□□ 1.42
CDHR3-210ENST00000474330 TMOD2Q9NZR1 351 aa23.93■■□□□ 1.42
CDHR3-210ENST00000474330 ASTN2O75129 1339 aaPredicted RBP23.93■■□□□ 1.42
CDHR3-210ENST00000474330 WNT10BO00744 389 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 TMEM67Q5HYA8 995 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 SGMS1Q86VZ5 419 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 CCDC83Q8IWF9 413 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 LY9Q9HBG7 655 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 MKNK2Q9HBH9 465 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 ZNF70Q9UC06 446 aaPredicted RBP23.92■■□□□ 1.42
CDHR3-210ENST00000474330 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.92■■□□□ 1.42
CDHR3-210ENST00000474330 ERICH2A1L162 156 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 PFKFB2O60825 505 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 HLA-DOAP06340 250 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 PDIA3P30101 505 aaKnown RBP23.92■■□□□ 1.42
CDHR3-210ENST00000474330 CDK8P49336 464 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 GABPAQ06546 454 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 SPDYE2Q495Y8 402 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 DLK2Q6UY11 383 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 IQCA1Q86XH1 822 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 ZFPM1Q8IX07 1006 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 NECAB1Q8N987 351 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 UBAC1Q9BSL1 405 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 BRPF3Q9ULD4 1205 aa23.92■■□□□ 1.42
CDHR3-210ENST00000474330 COL2A1P02458 1487 aaPredicted RBP23.91■■□□□ 1.42
CDHR3-210ENST00000474330 TCP10Q12799 353 aa23.91■■□□□ 1.42
CDHR3-210ENST00000474330 NBPF9Q3BBW0 867 aa23.91■■□□□ 1.42
CDHR3-210ENST00000474330 FKBP1CQ5VVH2 108 aa23.91■■□□□ 1.42
CDHR3-210ENST00000474330 ZNF444Q8N0Y2 327 aaPredicted RBP23.91■■□□□ 1.42
CDHR3-210ENST00000474330 TMTC2Q8N394 836 aa23.91■■□□□ 1.42
CDHR3-210ENST00000474330 GTF3C6Q969F1 213 aa23.91■■□□□ 1.42
CDHR3-210ENST00000474330 ZKSCAN3Q9BRR0 538 aa23.91■■□□□ 1.42
CDHR3-210ENST00000474330 EHD4Q9H223 541 aa23.91■■□□□ 1.42
CDHR3-210ENST00000474330 CIZ1Q9ULV3 898 aaPredicted RBP23.91■■□□□ 1.42
CDHR3-210ENST00000474330 KLF18A0A0U1RQI7 1052 aa23.9■■□□□ 1.42
CDHR3-210ENST00000474330 STK3Q13188 491 aa23.9■■□□□ 1.42
CDHR3-210ENST00000474330 SEC23AQ15436 765 aa23.9■■□□□ 1.42
CDHR3-210ENST00000474330 CDC37L1Q7L3B6 337 aa23.9■■□□□ 1.42
CDHR3-210ENST00000474330 SLC44A5Q8NCS7 719 aa23.9■■□□□ 1.42
CDHR3-210ENST00000474330 ZSCAN10Q96SZ4 725 aaPredicted RBP23.9■■□□□ 1.42
CDHR3-210ENST00000474330 SERPINB13Q9UIV8 391 aa23.9■■□□□ 1.42
CDHR3-210ENST00000474330 TAOK2Q9UL54 1235 aa23.9■■□□□ 1.42
CDHR3-210ENST00000474330 TSPY2A6NKD2 308 aa23.89■■□□□ 1.42
CDHR3-210ENST00000474330 RASA1P20936 1047 aa23.89■■□□□ 1.42
CDHR3-210ENST00000474330 WTAPQ15007 396 aa23.89■■□□□ 1.42
CDHR3-210ENST00000474330 USP48Q86UV5 1035 aa23.89■■□□□ 1.42
CDHR3-210ENST00000474330 CHMP5Q9NZZ3 219 aa23.89■■□□□ 1.42
CDHR3-210ENST00000474330 SWAP70Q9UH65 585 aa23.89■■□□□ 1.42
CDHR3-210ENST00000474330 TNKSO95271 1327 aa23.89■■□□□ 1.41
CDHR3-210ENST00000474330 ATRNL1Q5VV63 1379 aa23.89■■□□□ 1.41
CDHR3-210ENST00000474330 MYH8P13535 1937 aa23.88■■□□□ 1.41
CDHR3-210ENST00000474330 CLRN2A0PK11 232 aa23.88■■□□□ 1.41
CDHR3-210ENST00000474330 TFAP4Q01664 338 aa23.88■■□□□ 1.41
CDHR3-210ENST00000474330 SCRN1Q12765 414 aa23.88■■□□□ 1.41
CDHR3-210ENST00000474330 FAM47AQ5JRC9 791 aa23.88■■□□□ 1.41
CDHR3-210ENST00000474330 JMYQ8N9B5 988 aa23.88■■□□□ 1.41
CDHR3-210ENST00000474330 CHMP4CQ96CF2 233 aa23.88■■□□□ 1.41
CDHR3-210ENST00000474330 SENP2Q9HC62 589 aa23.88■■□□□ 1.41
CDHR3-210ENST00000474330 PI4KBQ9UBF8 816 aa23.88■■□□□ 1.41
CDHR3-210ENST00000474330 SIPA1L1O43166 1804 aa23.88■■□□□ 1.41
CDHR3-210ENST00000474330 DDTLA6NHG4 134 aaPredicted RBP23.88■■□□□ 1.41
CDHR3-210ENST00000474330 SH3BP5LQ7L8J4 393 aa23.88■■□□□ 1.41
CDHR3-210ENST00000474330 APOA5Q6Q788 366 aa23.87■■□□□ 1.41
CDHR3-210ENST00000474330 NFXL1Q6ZNB6 911 aa23.87■■□□□ 1.41
CDHR3-210ENST00000474330 FAM151AQ8WW52 585 aa23.87■■□□□ 1.41
CDHR3-210ENST00000474330 TCP11L1Q9NUJ3 509 aa23.87■■□□□ 1.41
CDHR3-210ENST00000474330 NAP1L2Q9ULW6 460 aaPredicted RBP23.87■■□□□ 1.41
CDHR3-210ENST00000474330 CCDC69A6NI79 296 aa23.86■■□□□ 1.41
CDHR3-210ENST00000474330 TCP10L2B9ZVM9 353 aa23.86■■□□□ 1.41
CDHR3-210ENST00000474330 CCDC178Q5BJE1 867 aa23.86■■□□□ 1.41
CDHR3-210ENST00000474330 FAM83AQ86UY5 434 aa23.86■■□□□ 1.41
CDHR3-210ENST00000474330 FOXP4Q8IVH2 680 aaPredicted RBP23.86■■□□□ 1.41
CDHR3-210ENST00000474330 ZSCAN29Q8IWY8 852 aaPredicted RBP23.86■■□□□ 1.41
CDHR3-210ENST00000474330 ENAHQ8N8S7 591 aaPredicted RBP23.86■■□□□ 1.41
CDHR3-210ENST00000474330 VEZTQ9HBM0 779 aa23.86■■□□□ 1.41
CDHR3-210ENST00000474330 HPS5Q9UPZ3 1129 aa23.86■■□□□ 1.41
CDHR3-210ENST00000474330 SMC3Q9UQE7 1217 aa23.86■■□□□ 1.41
CDHR3-210ENST00000474330 GOLGA8BA8MQT2 603 aa23.85■■□□□ 1.41
CDHR3-210ENST00000474330 TSPY3P0CV98 308 aa23.85■■□□□ 1.41
CDHR3-210ENST00000474330 TSPY8P0CW00 308 aa23.85■■□□□ 1.41
CDHR3-210ENST00000474330 KRT26Q7Z3Y9 468 aa23.85■■□□□ 1.41
CDHR3-210ENST00000474330 METTL16Q86W50 562 aaKnown RBP23.85■■□□□ 1.41
CDHR3-210ENST00000474330 DCPSQ96C86 337 aaKnown RBP23.85■■□□□ 1.41
CDHR3-210ENST00000474330 LLPHQ9BRT6 129 aaKnown RBP23.85■■□□□ 1.41
CDHR3-210ENST00000474330 GGA3Q9NZ52 723 aa23.85■■□□□ 1.41
CDHR3-210ENST00000474330 SLC12A7Q9Y666 1083 aa23.85■■□□□ 1.41
CDHR3-210ENST00000474330 CNTNAP1P78357 1384 aa23.85■■□□□ 1.41
CDHR3-210ENST00000474330 ADM5C9JUS6 153 aa23.84■■□□□ 1.41
CDHR3-210ENST00000474330 CCT2P78371 535 aaKnown RBP23.84■■□□□ 1.41
CDHR3-210ENST00000474330 ANGEL2Q5VTE6 544 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms