RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 TRIM32Q13049 653 aa14.14□□□□□ -0.15
EXOSC1-207ENST00000474309 MTMR2Q13614 643 aa14.14□□□□□ -0.15
EXOSC1-207ENST00000474309 TGFBRAP1Q8WUH2 860 aa14.14□□□□□ -0.15
EXOSC1-207ENST00000474309 SOCS4Q8WXH5 440 aa14.14□□□□□ -0.15
EXOSC1-207ENST00000474309 USP6NLQ92738 828 aa14.14□□□□□ -0.15
EXOSC1-207ENST00000474309 LRCH3Q96II8 777 aa14.14□□□□□ -0.15
EXOSC1-207ENST00000474309 AATFQ9NY61 560 aaKnown RBP eCLIP14.14□□□□□ -0.15
EXOSC1-207ENST00000474309 RBPJLQ9UBG7 517 aa14.14□□□□□ -0.15
EXOSC1-207ENST00000474309 TRIM27P14373 513 aa14.13□□□□□ -0.15
EXOSC1-207ENST00000474309 Q3C1V9 767 aa14.13□□□□□ -0.15
EXOSC1-207ENST00000474309 LRIT3Q3SXY7 679 aa14.13□□□□□ -0.15
EXOSC1-207ENST00000474309 ATF7IPQ6VMQ6 1270 aa14.13□□□□□ -0.15
EXOSC1-207ENST00000474309 C7orf61Q8IZ16 206 aa14.13□□□□□ -0.15
EXOSC1-207ENST00000474309 TRIM34Q9BYJ4 488 aa14.13□□□□□ -0.15
EXOSC1-207ENST00000474309 DNAJC18Q9H819 358 aa14.13□□□□□ -0.15
EXOSC1-207ENST00000474309 TXNRD2Q9NNW7 524 aa14.13□□□□□ -0.15
EXOSC1-207ENST00000474309 CYP2E1P05181 493 aaPredicted RBP14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 ERVK-9P63128 1117 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 ERVK-24P63145 666 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 JAG1P78504 1218 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 ATP8B2P98198 1209 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 POLA2Q14181 598 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 PDE3AQ14432 1141 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 TNNI3KQ59H18 835 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 TTC39AQ5SRH9 613 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 USP17L2Q6R6M4 530 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 CERS3Q8IU89 383 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 MAPKAPK5Q8IW41 473 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 CRACR2BQ8N4Y2 399 aaPredicted RBP14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 PALD1Q9ULE6 856 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 FPGT-TNNI3KV9GXZ4 949 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 FLT1P17948 1338 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 LAMA3Q16787 3333 aa14.12□□□□□ -0.15
EXOSC1-207ENST00000474309 SIPA1L1O43166 1804 aa14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 DLL1O00548 723 aa14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 HLA-DOAP06340 250 aa14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 PRKAR2AP13861 404 aaKnown RBP14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 RGS2P41220 211 aa14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 CACNB2Q08289 660 aaPredicted RBP14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 MORN1Q5T089 497 aa14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 TMED8Q6PL24 325 aaPredicted RBP14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 PLEKHH3Q7Z736 793 aa14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 CCAR1Q8IX12 1150 aaKnown RBP14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 SSH3Q8TE77 659 aa14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 SNRKQ9NRH2 765 aa14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 EMILIN3Q9NT22 766 aa14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 ZBTB21Q9ULJ3 1066 aa14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 ZMYND8Q9ULU4 1186 aaPredicted RBP14.11□□□□□ -0.15
EXOSC1-207ENST00000474309 CDK5RAP2Q96SN8 1893 aa14.1□□□□□ -0.15
EXOSC1-207ENST00000474309 COL6A1P12109 1028 aa14.1□□□□□ -0.15
EXOSC1-207ENST00000474309 ZKSCAN1P17029 563 aaPredicted RBP14.1□□□□□ -0.15
EXOSC1-207ENST00000474309 LHX8Q68G74 356 aa14.1□□□□□ -0.15
EXOSC1-207ENST00000474309 TATDN1Q6P1N9 297 aa14.1□□□□□ -0.15
EXOSC1-207ENST00000474309 GPR142Q7Z601 462 aa14.1□□□□□ -0.15
EXOSC1-207ENST00000474309 ADGRA1Q86SQ6 560 aa14.1□□□□□ -0.15
EXOSC1-207ENST00000474309 C12orf42Q96LP6 360 aa14.1□□□□□ -0.15
EXOSC1-207ENST00000474309 DBNDD2Q9BQY9 259 aa14.1□□□□□ -0.15
EXOSC1-207ENST00000474309 RABGAP1Q9Y3P9 1069 aa14.1□□□□□ -0.15
EXOSC1-207ENST00000474309 FOCADQ5VW36 1801 aa14.1□□□□□ -0.15
EXOSC1-207ENST00000474309 USP17L15C9J2P7 530 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 USP17L13C9JLJ4 530 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 USP17L11C9JVI0 530 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 USP17L18D6R9N7 530 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 USP17L22D6RA61 530 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 USP17L17D6RBQ6 530 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 USP17L19D6RCP7 530 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 USP17L20D6RJB6 530 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 CCER2I3L3R5 266 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 GLRX3O76003 335 aaKnown RBP14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 GDF11O95390 407 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 MAGEA10P43363 369 aaPredicted RBP14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 ZAP70P43403 619 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 CCNA1P78396 465 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 USP17L24Q0WX57 530 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 TDHQ8IZJ6 230 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 PORCNQ9H237 461 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 NOP58Q9Y2X3 529 aaKnown RBP14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 MYO5AQ9Y4I1 1855 aaKnown RBP14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 PFASO15067 1338 aa14.09□□□□□ -0.15
EXOSC1-207ENST00000474309 MYH1P12882 1939 aa14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 DDX60LQ5H9U9 1706 aaKnown RBP14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 PEX10O60683 326 aa14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 SURF6O75683 361 aaKnown RBP14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 BCAR3O75815 825 aa14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 SYN1P17600 705 aa14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 USP14P54578 494 aa14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 MAP2K5Q13163 448 aa14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 POTEEQ6S8J3 1075 aa14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 LBX2Q6XYB7 198 aa14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 CATSPERGQ6ZRH7 1159 aa14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 FRAT1Q92837 279 aaPredicted RBP14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 CLUAP1Q96AJ1 413 aa14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 EDC3Q96F86 508 aaKnown RBP14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 APBA2Q99767 749 aa14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 UBE2OQ9C0C9 1292 aaKnown RBP14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 EHD4Q9H223 541 aa14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 TNNQ9UQP3 1299 aa14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 COL6A3P12111 3177 aa14.08□□□□□ -0.16
EXOSC1-207ENST00000474309 SLC15A5A6NIM6 579 aa14.07□□□□□ -0.16
EXOSC1-207ENST00000474309 GH2P01242 217 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms